Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0998
         (668 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ549085-1|CAD70159.1|  529|Anopheles gambiae thioredoxin-disulf...    27   0.53 
AJ549084-1|CAD70158.1|  505|Anopheles gambiae thioredoxin-disulf...    27   0.53 
AJ459821-1|CAD30858.1|  502|Anopheles gambiae thioredoxin reduct...    27   0.53 
AY903308-1|AAX48940.1|  241|Anopheles gambiae female-specific do...    26   1.2  
AY903307-1|AAX48939.1|  283|Anopheles gambiae male-specific doub...    26   1.2  
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    24   5.0  
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            24   5.0  
AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.       24   5.0  

>AJ549085-1|CAD70159.1|  529|Anopheles gambiae thioredoxin-disulfide
           reductase protein.
          Length = 529

 Score = 27.1 bits (57), Expect = 0.53
 Identities = 13/25 (52%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
 Frame = +3

Query: 570 GASVAHIR-LRPRPRNTKVGRGGVC 641
           GA VA +  ++P PR TK G GG C
Sbjct: 60  GAKVAVLDFVKPSPRGTKWGLGGTC 84


>AJ549084-1|CAD70158.1|  505|Anopheles gambiae thioredoxin-disulfide
           reductase protein.
          Length = 505

 Score = 27.1 bits (57), Expect = 0.53
 Identities = 13/25 (52%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
 Frame = +3

Query: 570 GASVAHIR-LRPRPRNTKVGRGGVC 641
           GA VA +  ++P PR TK G GG C
Sbjct: 36  GAKVAVLDFVKPSPRGTKWGLGGTC 60


>AJ459821-1|CAD30858.1|  502|Anopheles gambiae thioredoxin reductase
           protein.
          Length = 502

 Score = 27.1 bits (57), Expect = 0.53
 Identities = 13/25 (52%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
 Frame = +3

Query: 570 GASVAHIR-LRPRPRNTKVGRGGVC 641
           GA VA +  ++P PR TK G GG C
Sbjct: 33  GAKVAVLDFVKPSPRGTKWGLGGTC 57


>AY903308-1|AAX48940.1|  241|Anopheles gambiae female-specific
           doublesex protein protein.
          Length = 241

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +3

Query: 456 PQPKRLRDCERSTSSRSRDPATA 524
           P+P R  DC+ ST S +  P T+
Sbjct: 105 PEPPRSFDCDSSTGSMASAPGTS 127


>AY903307-1|AAX48939.1|  283|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 283

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +3

Query: 456 PQPKRLRDCERSTSSRSRDPATA 524
           P+P R  DC+ ST S +  P T+
Sbjct: 105 PEPPRSFDCDSSTGSMASAPGTS 127


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 10/31 (32%), Positives = 12/31 (38%)
 Frame = +3

Query: 93  LRLGGSGSDRCEAQSSHAVKAWTGTPCDYKA 185
           L   G    RC        + WTG  CD +A
Sbjct: 601 LLCSGPDHGRCVCGQCECREGWTGPACDCRA 631


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +3

Query: 366 KSSSPKDRTCVH*RSWQS 419
           K   PK  TC H +SW S
Sbjct: 755 KMECPKQCTCYHDQSWSS 772


>AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.
          Length = 525

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 11/25 (44%), Positives = 11/25 (44%)
 Frame = +1

Query: 109 QDPTGVKPRAVTPSKRGRGRPATTR 183
           Q PT   P   T S    G P TTR
Sbjct: 438 QPPTSDAPNHTTTSTTTEGNPGTTR 462


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 675,416
Number of Sequences: 2352
Number of extensions: 13037
Number of successful extensions: 20
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66904800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)