Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0996
         (691 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    26   0.33 
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    25   0.77 
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   5.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.5  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    21   9.5  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 25.8 bits (54), Expect = 0.33
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = +2

Query: 323 IKLMYKRDGLALTLDDENSNDGRLAYGDGKDKTSPKV 433
           IKL+ +++      DDE   + +   G+ KDK  PK+
Sbjct: 211 IKLVVEKEREKELSDDEAEEEKKEEEGEDKDKDKPKI 247


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 24.6 bits (51), Expect = 0.77
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = +1

Query: 58  TKPQSPTPNSKTIFTTASSLPIT 126
           T   +PT +S+++ T+ SS+P T
Sbjct: 89  TSTSNPTYSSRSVMTSCSSVPTT 111


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 7/19 (36%), Positives = 15/19 (78%)
 Frame = +2

Query: 284 FPVEFRLIFAENNIKLMYK 340
           FP+++ L+F+E  + L++K
Sbjct: 701 FPIDYSLVFSETKL-LLFK 718


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 8/22 (36%), Positives = 10/22 (45%)
 Frame = +2

Query: 521  FKQPRTITTWPTGPTASKDLRP 586
            ++ P T   W T  T S   RP
Sbjct: 1174 YRPPSTTNHWQTKTTTSTTTRP 1195


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 8/19 (42%), Positives = 9/19 (47%)
 Frame = +1

Query: 229 WSTPTSYGSRLQRYRPGVL 285
           W TPTS        R GV+
Sbjct: 7   WDTPTSSAPAFSEQRGGVI 25


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,437
Number of Sequences: 336
Number of extensions: 2760
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18114270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)