Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0995
(508 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI00015B44CD Cluster: PREDICTED: similar to proteasome... 94 1e-18
UniRef50_UPI0000DB6C86 Cluster: PREDICTED: similar to proteasome... 93 2e-18
UniRef50_Q13041 Cluster: P67; n=14; Coelomata|Rep: P67 - Homo sa... 82 6e-15
UniRef50_Q13200 Cluster: 26S proteasome non-ATPase regulatory su... 82 6e-15
UniRef50_UPI0000D56C55 Cluster: PREDICTED: similar to proteasome... 76 5e-13
UniRef50_O49456 Cluster: Putative uncharacterized protein F20O9.... 75 9e-13
UniRef50_A5KBK8 Cluster: 26S proteasome regulatory subunit, puta... 71 2e-11
UniRef50_Q9GZH5 Cluster: Proteasome regulatory particle, non-atp... 70 3e-11
UniRef50_Q54BC6 Cluster: 26S proteasome regulatory subunit S2; n... 69 6e-11
UniRef50_Q4PAF8 Cluster: Putative uncharacterized protein; n=1; ... 69 6e-11
UniRef50_Q6CFX0 Cluster: Similar to sp|P38764 Saccharomyces cere... 69 8e-11
UniRef50_A0EBG0 Cluster: Chromosome undetermined scaffold_88, wh... 64 2e-09
UniRef50_P87048 Cluster: 26S proteasome regulatory subunit rpn1;... 63 4e-09
UniRef50_UPI0000E465E2 Cluster: PREDICTED: similar to MGC83233 p... 62 5e-09
UniRef50_A2WYR0 Cluster: Putative uncharacterized protein; n=1; ... 62 7e-09
UniRef50_O61123 Cluster: 19S cap proteasome S2 subunit; n=2; Ent... 60 3e-08
UniRef50_Q6BP56 Cluster: Similar to CA1252|CaRPN1 Candida albica... 60 3e-08
UniRef50_Q5KAX5 Cluster: Endopeptidase, putative; n=1; Filobasid... 57 2e-07
UniRef50_Q5CPW2 Cluster: Proteasome regulatory subunit S2; n=2; ... 56 6e-07
UniRef50_P38764 Cluster: 26S proteasome regulatory subunit RPN1;... 56 6e-07
UniRef50_Q6FPV6 Cluster: 26S proteasome regulatory subunit RPN1;... 55 8e-07
UniRef50_A7AS27 Cluster: Proteasome 26S regulatory subunit, puta... 55 1e-06
UniRef50_A2EPF2 Cluster: Proteasome/cyclosome repeat family prot... 53 4e-06
UniRef50_Q4N7W1 Cluster: 26S proteasome regulatory subunit 2, pu... 51 1e-05
UniRef50_Q8WRU8 Cluster: Proteasome regulatory non-ATP-ase subun... 40 0.032
UniRef50_Q9N642 Cluster: Putative uncharacterized protein; n=3; ... 36 0.53
UniRef50_Q6LJK7 Cluster: Putative uncharacterized protein; n=2; ... 35 1.2
UniRef50_UPI0000EBDA8F Cluster: PREDICTED: hypothetical protein;... 34 1.6
UniRef50_Q8SS65 Cluster: 26S PROTEASOME REGULATORY SUBUNIT 4; n=... 32 6.5
UniRef50_UPI0000DD7908 Cluster: PREDICTED: hypothetical protein;... 32 8.6
UniRef50_Q1D0Q6 Cluster: Putative uncharacterized protein; n=2; ... 32 8.6
UniRef50_Q750W3 Cluster: AGL174Wp; n=1; Eremothecium gossypii|Re... 32 8.6
UniRef50_Q6PCP7 Cluster: Probable G-protein coupled receptor 156... 32 8.6
>UniRef50_UPI00015B44CD Cluster: PREDICTED: similar to proteasome
26S non-ATPase subunit 2; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to proteasome 26S non-ATPase subunit
2 - Nasonia vitripennis
Length = 897
Score = 94.3 bits (224), Expect = 1e-18
Identities = 43/57 (75%), Positives = 49/57 (85%)
Frame = +1
Query: 85 LTAFLDCKTIILGKSHYLLYVLATXMQPRWLVTLDENLQPLNVSXRVGQAVDVIGKA 255
L +FLDCK +ILGKSHYL+Y LA M+PRWLVTLDENL+ L VS RVGQAVDV+GKA
Sbjct: 791 LVSFLDCKNLILGKSHYLMYCLALAMEPRWLVTLDENLELLPVSVRVGQAVDVLGKA 847
Score = 54.0 bits (124), Expect = 2e-06
Identities = 26/48 (54%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Frame = +3
Query: 249 KSGTPKTIAGXHTHTMXVLLSFGERAEL-AXDEYIPLSPIMEGFVILK 389
K+G PK+I G H HT +L++ GE+AEL + DEY PL MEG VIL+
Sbjct: 846 KAGNPKSITGGHVHTTPLLMAHGEKAELVSNDEYEPLVDPMEGVVILR 893
>UniRef50_UPI0000DB6C86 Cluster: PREDICTED: similar to proteasome
(prosome, macropain) 26S subunit, non-ATPase, 2; n=1;
Apis mellifera|Rep: PREDICTED: similar to proteasome
(prosome, macropain) 26S subunit, non-ATPase, 2 - Apis
mellifera
Length = 871
Score = 93.5 bits (222), Expect = 2e-18
Identities = 42/57 (73%), Positives = 48/57 (84%)
Frame = +1
Query: 85 LTAFLDCKTIILGKSHYLLYVLATXMQPRWLVTLDENLQPLNVSXRVGQAVDVIGKA 255
L AFLDC+ +IL KSHYL+Y LA M+PRWLVTLDENLQ L VS RVGQAVD++GKA
Sbjct: 764 LVAFLDCQNLILAKSHYLMYCLALAMEPRWLVTLDENLQTLPVSVRVGQAVDIVGKA 820
Score = 64.9 bits (151), Expect = 1e-09
Identities = 31/52 (59%), Positives = 39/52 (75%)
Frame = +3
Query: 249 KSGTPKTIAGXHTHTMXVLLSFGERAELAXDEYIPLSPIMEGFVILKKNEDS 404
K+G PK+I+ + HT LLS GERAELA DEY PLS I+EGFVIL++ +S
Sbjct: 819 KAGNPKSISAGYVHTTPTLLSSGERAELALDEYEPLSCILEGFVILREKLNS 870
>UniRef50_Q13041 Cluster: P67; n=14; Coelomata|Rep: P67 - Homo
sapiens (Human)
Length = 591
Score = 82.2 bits (194), Expect = 6e-15
Identities = 39/57 (68%), Positives = 45/57 (78%)
Frame = +1
Query: 85 LTAFLDCKTIILGKSHYLLYVLATXMQPRWLVTLDENLQPLNVSXRVGQAVDVIGKA 255
L +FLD + IILGKSHY+LY L MQPR LVT DE L+PL VS RVGQAVDV+G+A
Sbjct: 482 LVSFLDVRNIILGKSHYVLYGLVAAMQPRMLVTFDEELRPLPVSVRVGQAVDVVGQA 538
Score = 65.3 bits (152), Expect = 8e-10
Identities = 28/45 (62%), Positives = 37/45 (82%)
Frame = +3
Query: 249 KSGTPKTIAGXHTHTMXVLLSFGERAELAXDEYIPLSPIMEGFVI 383
++G PKTI G THT VLL+ GERAELA +E++P++PI+EGFVI
Sbjct: 537 QAGKPKTITGFQTHTTPVLLAHGERAELATEEFLPVTPILEGFVI 581
>UniRef50_Q13200 Cluster: 26S proteasome non-ATPase regulatory
subunit 2; n=48; Euteleostomi|Rep: 26S proteasome
non-ATPase regulatory subunit 2 - Homo sapiens (Human)
Length = 908
Score = 82.2 bits (194), Expect = 6e-15
Identities = 39/57 (68%), Positives = 45/57 (78%)
Frame = +1
Query: 85 LTAFLDCKTIILGKSHYLLYVLATXMQPRWLVTLDENLQPLNVSXRVGQAVDVIGKA 255
L +FLD + IILGKSHY+LY L MQPR LVT DE L+PL VS RVGQAVDV+G+A
Sbjct: 800 LVSFLDVRNIILGKSHYVLYGLVAAMQPRMLVTFDEELRPLPVSVRVGQAVDVVGQA 856
Score = 72.1 bits (169), Expect = 7e-12
Identities = 31/49 (63%), Positives = 41/49 (83%)
Frame = +3
Query: 249 KSGTPKTIAGXHTHTMXVLLSFGERAELAXDEYIPLSPIMEGFVILKKN 395
++G PKTI G THT VLL+ GERAELA +E++P++PI+EGFVIL+KN
Sbjct: 855 QAGKPKTITGFQTHTTPVLLAHGERAELATEEFLPVTPILEGFVILRKN 903
>UniRef50_UPI0000D56C55 Cluster: PREDICTED: similar to proteasome
(prosome, macropain) 26S subunit, non-ATPase, 2; n=1;
Tribolium castaneum|Rep: PREDICTED: similar to
proteasome (prosome, macropain) 26S subunit, non-ATPase,
2 - Tribolium castaneum
Length = 870
Score = 75.8 bits (178), Expect = 5e-13
Identities = 34/57 (59%), Positives = 43/57 (75%)
Frame = +1
Query: 85 LTAFLDCKTIILGKSHYLLYVLATXMQPRWLVTLDENLQPLNVSXRVGQAVDVIGKA 255
L L ++ILG+ HYLLY LA MQPRWL+TLD+NL ++V+ RVGQAVD +GKA
Sbjct: 766 LVCLLKPHSLILGRCHYLLYSLAAAMQPRWLLTLDDNLNSVSVTVRVGQAVDTVGKA 822
Score = 58.4 bits (135), Expect = 9e-08
Identities = 27/48 (56%), Positives = 32/48 (66%)
Frame = +3
Query: 249 KSGTPKTIAGXHTHTMXVLLSFGERAELAXDEYIPLSPIMEGFVILKK 392
K+G PKTIAG HTHT VLL ERAE A EY +P ++G +LKK
Sbjct: 821 KAGDPKTIAGIHTHTTPVLLCANERAEFANGEYESTAPALDGICVLKK 868
>UniRef50_O49456 Cluster: Putative uncharacterized protein F20O9.150;
n=1; Arabidopsis thaliana|Rep: Putative uncharacterized
protein F20O9.150 - Arabidopsis thaliana (Mouse-ear
cress)
Length = 1103
Score = 74.9 bits (176), Expect = 9e-13
Identities = 34/57 (59%), Positives = 46/57 (80%)
Frame = +1
Query: 85 LTAFLDCKTIILGKSHYLLYVLATXMQPRWLVTLDENLQPLNVSXRVGQAVDVIGKA 255
L A LD K+IILGK HY+LY L MQPR ++T+D++L+P++V RVGQAVDV+G+A
Sbjct: 885 LHACLDMKSIILGKYHYVLYFLVLAMQPRMMLTVDQSLKPISVPVRVGQAVDVVGQA 941
Score = 48.4 bits (110), Expect = 9e-05
Identities = 22/41 (53%), Positives = 31/41 (75%), Gaps = 1/41 (2%)
Frame = +3
Query: 249 KSGTPKTIAGXHTHTMXVLLSFGERAELAXDEY-IPLSPIM 368
++G PKTI G TH+ VLL+ GERAELA ++Y +PL P++
Sbjct: 940 QAGRPKTITGFQTHSTPVLLAAGERAELATEKYVVPLIPLL 980
>UniRef50_A5KBK8 Cluster: 26S proteasome regulatory subunit, putative;
n=5; Plasmodium|Rep: 26S proteasome regulatory subunit,
putative - Plasmodium vivax
Length = 1039
Score = 70.5 bits (165), Expect = 2e-11
Identities = 34/55 (61%), Positives = 42/55 (76%)
Frame = +1
Query: 91 AFLDCKTIILGKSHYLLYVLATXMQPRWLVTLDENLQPLNVSXRVGQAVDVIGKA 255
A L KT ILGK HYLLY L + PR LVT++E+L+PL +S RVGQAVDV+G+A
Sbjct: 929 ACLQLKTTILGKYHYLLYHLVPCIYPRMLVTVNEDLEPLPISVRVGQAVDVVGQA 983
Score = 59.3 bits (137), Expect = 5e-08
Identities = 27/57 (47%), Positives = 39/57 (68%)
Frame = +3
Query: 249 KSGTPKTIAGXHTHTMXVLLSFGERAELAXDEYIPLSPIMEGFVILKKNEDSVMASV 419
++G PKTI G TH VLL +RAE+A +EYIP++ +EG VILKK+ + V ++
Sbjct: 982 QAGKPKTITGFQTHVTPVLLLHTDRAEIATEEYIPINDTLEGIVILKKDPNYVPPAI 1038
>UniRef50_Q9GZH5 Cluster: Proteasome regulatory particle,
non-atpase-like protein 1; n=2; Caenorhabditis|Rep:
Proteasome regulatory particle, non-atpase-like protein 1
- Caenorhabditis elegans
Length = 981
Score = 70.1 bits (164), Expect = 3e-11
Identities = 32/51 (62%), Positives = 39/51 (76%)
Frame = +3
Query: 249 KSGTPKTIAGXHTHTMXVLLSFGERAELAXDEYIPLSPIMEGFVILKKNED 401
++G PKTI G THT VLL+ GERAELA DEY+ ++P +EG VILKKN D
Sbjct: 921 QAGKPKTITGFQTHTTPVLLAHGERAELANDEYLSVTPHLEGLVILKKNPD 971
Score = 56.8 bits (131), Expect = 3e-07
Identities = 33/62 (53%), Positives = 40/62 (64%), Gaps = 7/62 (11%)
Frame = +1
Query: 91 AFLDCK-TIILGKSHYLLYVLATXMQPRWLVTLDE------NLQPLNVSXRVGQAVDVIG 249
+FLD TI+ + HYLLY L MQPR L TL E +L+ LNVS RVGQAVDV+
Sbjct: 861 SFLDANNTILNNRQHYLLYTLVLAMQPRMLTTLVEDEMKPGSLKQLNVSVRVGQAVDVVA 920
Query: 250 KA 255
+A
Sbjct: 921 QA 922
>UniRef50_Q54BC6 Cluster: 26S proteasome regulatory subunit S2; n=1;
Dictyostelium discoideum AX4|Rep: 26S proteasome
regulatory subunit S2 - Dictyostelium discoideum AX4
Length = 893
Score = 68.9 bits (161), Expect = 6e-11
Identities = 32/55 (58%), Positives = 40/55 (72%)
Frame = +3
Query: 252 SGTPKTIAGXHTHTMXVLLSFGERAELAXDEYIPLSPIMEGFVILKKNEDSVMAS 416
+G PKTI G THT VLL + ERAELA D+YIPL+ I+EG VILK N ++ + S
Sbjct: 832 AGKPKTITGFQTHTTPVLLGYNERAELATDDYIPLTNILEGIVILKPNPNASVTS 886
Score = 64.9 bits (151), Expect = 1e-09
Identities = 31/57 (54%), Positives = 41/57 (71%)
Frame = +1
Query: 85 LTAFLDCKTIILGKSHYLLYVLATXMQPRWLVTLDENLQPLNVSXRVGQAVDVIGKA 255
L A LD K I+ +SHYL + + M PR L+TLDE+L+PL VS RVGQ+VD++G A
Sbjct: 776 LHAGLDIKNILSTQSHYLFFSIVCSMYPRMLMTLDEDLKPLPVSVRVGQSVDIVGLA 832
>UniRef50_Q4PAF8 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 946
Score = 68.9 bits (161), Expect = 6e-11
Identities = 30/57 (52%), Positives = 44/57 (77%)
Frame = +1
Query: 85 LTAFLDCKTIILGKSHYLLYVLATXMQPRWLVTLDENLQPLNVSXRVGQAVDVIGKA 255
LT+ D + +L +SH++LY L++ M PR+L+TLDENL+ L S RVG+AVDV+G+A
Sbjct: 834 LTSMTDARGFVLDQSHWMLYFLSSAMYPRFLITLDENLEALPTSVRVGKAVDVVGQA 890
Score = 51.6 bits (118), Expect = 1e-05
Identities = 26/65 (40%), Positives = 36/65 (55%)
Frame = +3
Query: 201 ALERXXACGTGCGCYRKSGTPKTIAGXHTHTMXVLLSFGERAELAXDEYIPLSPIMEGFV 380
AL G ++G P+TI+G THT V + ERAEL +EY+ + ++EGF
Sbjct: 873 ALPTSVRVGKAVDVVGQAGKPRTISGFQTHTTPVRVGTFERAELGTEEYLSYAHVLEGFS 932
Query: 381 ILKKN 395
IL KN
Sbjct: 933 ILLKN 937
>UniRef50_Q6CFX0 Cluster: Similar to sp|P38764 Saccharomyces
cerevisiae 26S proteasome regulatory subunit RPN1; n=1;
Yarrowia lipolytica|Rep: Similar to sp|P38764
Saccharomyces cerevisiae 26S proteasome regulatory
subunit RPN1 - Yarrowia lipolytica (Candida lipolytica)
Length = 979
Score = 68.5 bits (160), Expect = 8e-11
Identities = 33/51 (64%), Positives = 38/51 (74%)
Frame = +3
Query: 249 KSGTPKTIAGXHTHTMXVLLSFGERAELAXDEYIPLSPIMEGFVILKKNED 401
++G PKTI G TH+ VLLS GERAEL DEYIPL+ +EG VILKKN D
Sbjct: 923 QAGKPKTITGWVTHSTPVLLSHGERAELEDDEYIPLASSLEGVVILKKNPD 973
Score = 63.3 bits (147), Expect = 3e-09
Identities = 27/57 (47%), Positives = 40/57 (70%)
Frame = +1
Query: 85 LTAFLDCKTIILGKSHYLLYVLATXMQPRWLVTLDENLQPLNVSXRVGQAVDVIGKA 255
L +D K+ IL +H++L+ L ++PR L+TLDE L+P+ V RVGQAVD +G+A
Sbjct: 868 LVTMIDPKSFILADNHWMLFWLTNAIRPRMLITLDEKLEPIKVPVRVGQAVDTVGQA 924
>UniRef50_A0EBG0 Cluster: Chromosome undetermined scaffold_88, whole
genome shotgun sequence; n=3; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_88, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 887
Score = 64.1 bits (149), Expect = 2e-09
Identities = 31/52 (59%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Frame = +3
Query: 249 KSGTPKTIAGXHTHTMXVLLSFGERAELAXDEYIPLSP-IMEGFVILKKNED 401
++G PK I G THT V++S GERAELA DEY+P+ I+E FVILKKN D
Sbjct: 819 QAGKPKRITGFQTHTSPVIVSAGERAELANDEYMPVQDMILENFVILKKNPD 870
Score = 60.5 bits (140), Expect = 2e-08
Identities = 30/53 (56%), Positives = 35/53 (66%)
Frame = +1
Query: 97 LDCKTIILGKSHYLLYVLATXMQPRWLVTLDENLQPLNVSXRVGQAVDVIGKA 255
LD K +IL K H LLY L M PR TL+ENL+ L V RVGQAVD +G+A
Sbjct: 768 LDIKNLILEKHHTLLYYLGIAMYPRMFFTLNENLENLPVQVRVGQAVDAVGQA 820
>UniRef50_P87048 Cluster: 26S proteasome regulatory subunit rpn1;
n=23; cellular organisms|Rep: 26S proteasome regulatory
subunit rpn1 - Schizosaccharomyces pombe (Fission yeast)
Length = 891
Score = 62.9 bits (146), Expect = 4e-09
Identities = 30/55 (54%), Positives = 39/55 (70%)
Frame = +1
Query: 91 AFLDCKTIILGKSHYLLYVLATXMQPRWLVTLDENLQPLNVSXRVGQAVDVIGKA 255
A LD T +L SH+LLY + ++PR L+TL E+ Q L VS RVGQAVDV+G+A
Sbjct: 783 AMLDANTFVLDTSHWLLYAITLAIRPRMLITLGEDGQYLPVSVRVGQAVDVVGQA 837
Score = 56.0 bits (129), Expect = 5e-07
Identities = 28/53 (52%), Positives = 35/53 (66%)
Frame = +3
Query: 249 KSGTPKTIAGXHTHTMXVLLSFGERAELAXDEYIPLSPIMEGFVILKKNEDSV 407
++G PK I G THT VLL ERAELA + Y PL+ +EG VILKKN + +
Sbjct: 836 QAGRPKVITGWVTHTTPVLLHHNERAELATEAYTPLTS-LEGIVILKKNTEDI 887
>UniRef50_UPI0000E465E2 Cluster: PREDICTED: similar to MGC83233
protein, partial; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to MGC83233 protein,
partial - Strongylocentrotus purpuratus
Length = 418
Score = 62.5 bits (145), Expect = 5e-09
Identities = 30/47 (63%), Positives = 34/47 (72%)
Frame = +1
Query: 91 AFLDCKTIILGKSHYLLYVLATXMQPRWLVTLDENLQPLNVSXRVGQ 231
AFLD K IL KSHYL+Y L T M+PR +VT DE L+PL V RVGQ
Sbjct: 372 AFLDVKNTILSKSHYLVYGLVTAMRPRKVVTFDEELRPLPVQVRVGQ 418
>UniRef50_A2WYR0 Cluster: Putative uncharacterized protein; n=1; Oryza
sativa (indica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. indica
(Rice)
Length = 1103
Score = 62.1 bits (144), Expect = 7e-09
Identities = 34/65 (52%), Positives = 45/65 (69%), Gaps = 5/65 (7%)
Frame = +1
Query: 85 LTAFLDCKTIILGKSHYLLYVLATXMQP----RWLVTLDENLQPLNVSXRVGQAVD-VIG 249
L A LD K+ ILGK HY+LY++ MQ R L+T+DE L+P++V RVGQAVD V+
Sbjct: 924 LHACLDMKSTILGKYHYILYIIVLAMQVVVDIRMLLTVDEYLKPISVPVRVGQAVDVVVA 983
Query: 250 KAVHR 264
A+HR
Sbjct: 984 VALHR 988
>UniRef50_O61123 Cluster: 19S cap proteasome S2 subunit; n=2;
Entamoeba histolytica|Rep: 19S cap proteasome S2 subunit
- Entamoeba histolytica
Length = 843
Score = 60.1 bits (139), Expect = 3e-08
Identities = 26/49 (53%), Positives = 35/49 (71%)
Frame = +3
Query: 249 KSGTPKTIAGXHTHTMXVLLSFGERAELAXDEYIPLSPIMEGFVILKKN 395
++G+PKTI G TH VL+ GERAELA D+Y LS ++EG V++K N
Sbjct: 795 QAGSPKTITGFQTHNTPVLIGVGERAELAVDDYSSLSSVLEGIVLVKHN 843
Score = 41.1 bits (92), Expect = 0.014
Identities = 20/47 (42%), Positives = 29/47 (61%)
Frame = +1
Query: 115 ILGKSHYLLYVLATXMQPRWLVTLDENLQPLNVSXRVGQAVDVIGKA 255
I G + Y++ L M+PR + +DEN + + S RVG AVDV G+A
Sbjct: 750 ISGLNTYIINALCLAMKPRMFMPIDENGKVVETSCRVGVAVDVAGQA 796
>UniRef50_Q6BP56 Cluster: Similar to CA1252|CaRPN1 Candida albicans
CaRPN1 26S proteasome regulatory subunit; n=2;
Saccharomycetaceae|Rep: Similar to CA1252|CaRPN1 Candida
albicans CaRPN1 26S proteasome regulatory subunit -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 967
Score = 60.1 bits (139), Expect = 3e-08
Identities = 32/60 (53%), Positives = 41/60 (68%), Gaps = 5/60 (8%)
Frame = +1
Query: 91 AFLDCKTIILGKS-----HYLLYVLATXMQPRWLVTLDENLQPLNVSXRVGQAVDVIGKA 255
A LD K+ IL S H LLY L ++PR LVT+DE+L P+ V+ RVGQAVDV+G+A
Sbjct: 852 ALLDPKSFILNDSNSETTHELLYYLTPAVKPRMLVTVDESLNPIKVNVRVGQAVDVVGQA 911
Score = 54.0 bits (124), Expect = 2e-06
Identities = 28/52 (53%), Positives = 37/52 (71%), Gaps = 1/52 (1%)
Frame = +3
Query: 249 KSGTPKTIAGXHTHTMXVLLSFGERAELA-XDEYIPLSPIMEGFVILKKNED 401
++G PKTI G T + VLL++GERAEL DE+I L+ +EG VILKKN +
Sbjct: 910 QAGKPKTITGWVTQSTPVLLNYGERAELENTDEWISLTNSLEGVVILKKNPE 961
>UniRef50_Q5KAX5 Cluster: Endopeptidase, putative; n=1; Filobasidiella
neoformans|Rep: Endopeptidase, putative - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 1003
Score = 57.2 bits (132), Expect = 2e-07
Identities = 24/57 (42%), Positives = 40/57 (70%)
Frame = +1
Query: 85 LTAFLDCKTIILGKSHYLLYVLATXMQPRWLVTLDENLQPLNVSXRVGQAVDVIGKA 255
L +F D + +LGK H++LY + M P++L+TL+E L+ + V+ RVGQAV+ + +A
Sbjct: 891 LVSFTDARKFVLGKYHWMLYWIVPAMFPQFLITLNEELEEIPVTVRVGQAVNTVAQA 947
Score = 50.4 bits (115), Expect = 2e-05
Identities = 24/58 (41%), Positives = 33/58 (56%)
Frame = +3
Query: 225 GTGCGCYRKSGTPKTIAGXHTHTMXVLLSFGERAELAXDEYIPLSPIMEGFVILKKNE 398
G ++GT I+G TH V ++ ERAEL +E+ P ++EG VILKKNE
Sbjct: 938 GQAVNTVAQAGTRHGISGFQTHQSPVRIATTERAELGTNEFFPYQSVLEGLVILKKNE 995
>UniRef50_Q5CPW2 Cluster: Proteasome regulatory subunit S2; n=2;
Cryptosporidium|Rep: Proteasome regulatory subunit S2 -
Cryptosporidium parvum Iowa II
Length = 1045
Score = 55.6 bits (128), Expect = 6e-07
Identities = 24/52 (46%), Positives = 34/52 (65%)
Frame = +3
Query: 249 KSGTPKTIAGXHTHTMXVLLSFGERAELAXDEYIPLSPIMEGFVILKKNEDS 404
++G P+ I G TH VLL F ERAELA DE++P +E VIL++N ++
Sbjct: 984 QAGNPRKITGFQTHNTPVLLGFNERAELATDEFVPACSAIEDIVILERNPEA 1035
Score = 52.0 bits (119), Expect = 7e-06
Identities = 24/58 (41%), Positives = 36/58 (62%)
Frame = +1
Query: 97 LDCKTIILGKSHYLLYVLATXMQPRWLVTLDENLQPLNVSXRVGQAVDVIGKAVHRRQ 270
L +TI+ G HYLL + + PR +VT+D +L P+ RVGQ VD +G+A + R+
Sbjct: 933 LRSRTILFGNYHYLLLSIVPAITPRHVVTVDTSLAPIQTLVRVGQMVDTVGQAGNPRK 990
>UniRef50_P38764 Cluster: 26S proteasome regulatory subunit RPN1; n=8;
Saccharomycetales|Rep: 26S proteasome regulatory subunit
RPN1 - Saccharomyces cerevisiae (Baker's yeast)
Length = 993
Score = 55.6 bits (128), Expect = 6e-07
Identities = 28/51 (54%), Positives = 34/51 (66%)
Frame = +3
Query: 249 KSGTPKTIAGXHTHTMXVLLSFGERAELAXDEYIPLSPIMEGFVILKKNED 401
++G PK I G T + VLL+ GERAEL DEYI + +EG VILKKN D
Sbjct: 938 QAGRPKKITGWITQSTPVLLNHGERAELETDEYISYTSHIEGVVILKKNPD 988
Score = 44.8 bits (101), Expect = 0.001
Identities = 17/44 (38%), Positives = 32/44 (72%)
Frame = +1
Query: 124 KSHYLLYVLATXMQPRWLVTLDENLQPLNVSXRVGQAVDVIGKA 255
K H L Y+L ++P++++ L++ +P+ V+ RVGQAV+ +G+A
Sbjct: 896 KHHQLFYMLNAGIRPKFILALNDEGEPIKVNVRVGQAVETVGQA 939
>UniRef50_Q6FPV6 Cluster: 26S proteasome regulatory subunit RPN1; n=2;
Saccharomycetales|Rep: 26S proteasome regulatory subunit
RPN1 - Candida glabrata (Yeast) (Torulopsis glabrata)
Length = 983
Score = 55.2 bits (127), Expect = 8e-07
Identities = 28/49 (57%), Positives = 33/49 (67%)
Frame = +3
Query: 249 KSGTPKTIAGXHTHTMXVLLSFGERAELAXDEYIPLSPIMEGFVILKKN 395
++G PKTI G T + VLL GERAEL DEYI + +EG VILKKN
Sbjct: 928 QAGKPKTITGWITQSTPVLLGHGERAELENDEYISYTNNIEGVVILKKN 976
Score = 45.6 bits (103), Expect = 7e-04
Identities = 17/44 (38%), Positives = 33/44 (75%)
Frame = +1
Query: 124 KSHYLLYVLATXMQPRWLVTLDENLQPLNVSXRVGQAVDVIGKA 255
K H L Y+L + ++P++++TL+E + + V+ R+GQAV+ +G+A
Sbjct: 886 KHHQLFYMLNSGVRPKFIITLNEEGEQIKVNVRIGQAVETVGQA 929
>UniRef50_A7AS27 Cluster: Proteasome 26S regulatory subunit, putative;
n=1; Babesia bovis|Rep: Proteasome 26S regulatory
subunit, putative - Babesia bovis
Length = 1008
Score = 54.8 bits (126), Expect = 1e-06
Identities = 24/52 (46%), Positives = 35/52 (67%)
Frame = +3
Query: 255 GTPKTIAGXHTHTMXVLLSFGERAELAXDEYIPLSPIMEGFVILKKNEDSVM 410
G + I+G TH VL+ ERAE+A D+YIP + ++EG VIL+KN++ M
Sbjct: 955 GKQRRISGFQTHQTPVLVGCNERAEIATDDYIPCTNVLEGIVILEKNDNVAM 1006
Score = 44.8 bits (101), Expect = 0.001
Identities = 19/62 (30%), Positives = 35/62 (56%)
Frame = +1
Query: 85 LTAFLDCKTIILGKSHYLLYVLATXMQPRWLVTLDENLQPLNVSXRVGQAVDVIGKAVHR 264
+ A LD K +G +++ +A ++PRW++TL +L+ + V RVG V+ G +
Sbjct: 898 IVAALDMKNTFVGSMPFIMLFVALCIRPRWMLTLSPDLEHIQVPCRVGNMVETTGTVGKQ 957
Query: 265 RQ 270
R+
Sbjct: 958 RR 959
>UniRef50_A2EPF2 Cluster: Proteasome/cyclosome repeat family
protein; n=2; Trichomonas vaginalis G3|Rep:
Proteasome/cyclosome repeat family protein - Trichomonas
vaginalis G3
Length = 850
Score = 52.8 bits (121), Expect = 4e-06
Identities = 24/53 (45%), Positives = 38/53 (71%)
Frame = +1
Query: 97 LDCKTIILGKSHYLLYVLATXMQPRWLVTLDENLQPLNVSXRVGQAVDVIGKA 255
++ + +++ K LL+ + + PR+LVTLDENL+ L + RVGQAVDV+G+A
Sbjct: 742 MNSEELLIKKDPLLLFFIVPAIGPRFLVTLDENLEILPLQVRVGQAVDVVGQA 794
>UniRef50_Q4N7W1 Cluster: 26S proteasome regulatory subunit 2,
putative; n=2; Theileria|Rep: 26S proteasome regulatory
subunit 2, putative - Theileria parva
Length = 1123
Score = 51.2 bits (117), Expect = 1e-05
Identities = 21/58 (36%), Positives = 41/58 (70%)
Frame = +1
Query: 97 LDCKTIILGKSHYLLYVLATXMQPRWLVTLDENLQPLNVSXRVGQAVDVIGKAVHRRQ 270
LD ++++ + +L + LA ++P+WL+TL+++L+ +++ RVG AVD IG A +R+
Sbjct: 1020 LDLRSLVCDEFPFLPFFLALAVRPKWLITLNQDLEVVHIPVRVGTAVDTIGTAGKQRK 1077
Score = 44.8 bits (101), Expect = 0.001
Identities = 21/53 (39%), Positives = 29/53 (54%)
Frame = +3
Query: 225 GTGCGCYRKSGTPKTIAGXHTHTMXVLLSFGERAELAXDEYIPLSPIMEGFVI 383
GT +G + I+G TH VL+ GERAELA +EY +P +E V+
Sbjct: 1063 GTAVDTIGTAGKQRKISGFQTHKSPVLIGVGERAELATEEYETFTPFLEDIVL 1115
>UniRef50_Q8WRU8 Cluster: Proteasome regulatory non-ATP-ase subunit 1;
n=9; Trypanosomatidae|Rep: Proteasome regulatory
non-ATP-ase subunit 1 - Trypanosoma brucei
Length = 911
Score = 39.9 bits (89), Expect = 0.032
Identities = 18/48 (37%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Frame = +3
Query: 252 SGTPKTIAGXHTHTMXVLLSFGERAELAXDEYIPLSPIMEG-FVILKK 392
+G PK+I G T T L+S ++ E+A +Y P++ ++EG FV+ +K
Sbjct: 860 AGKPKSITGFQTQTTPTLISVTDKVEVASQKYRPVASVVEGTFVVEEK 907
Score = 35.1 bits (77), Expect = 0.92
Identities = 19/59 (32%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Frame = +1
Query: 85 LTAFLDCKTIILGKSHYLLYVLATXMQPRWLVTLDENLQPL--NVSXRVGQAVDVIGKA 255
L + L+ + IILGK Y++ +A + PR ++ +D+ ++ + V RVG VD + A
Sbjct: 802 LHSALNFEEIILGKYSYMVSSIAPSINPRMVLAVDDQMEVVKDGVQVRVGLPVDTVAVA 860
>UniRef50_Q9N642 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 925
Score = 35.9 bits (79), Expect = 0.53
Identities = 32/121 (26%), Positives = 41/121 (33%)
Frame = +3
Query: 9 GDPVSRARAXGACSIQPALAGLLVVTHRLPRLQDHNPRQIPLLAVRIGDXDATPLAGHPR 188
G P R R GA A A + V + L + PR P VR A P HP
Sbjct: 294 GSPSRRGRCGGAAQSVAANASIGVSSITLDNSPNERPRGQPPQPVR--RATANPTTAHPH 351
Query: 189 RKSSALERXXACGTGCGCYRKSGTPKTIAGXHTHTMXVLLSFGERAELAXDEYIPLSPIM 368
+ + A+ R G C A H ER E A D + P++
Sbjct: 352 QPAMAVSRGALSGPRSACAEPCHNHSAAAEPPQHPRGSPARAEERTEDANDTDGDVPPVV 411
Query: 369 E 371
E
Sbjct: 412 E 412
>UniRef50_Q6LJK7 Cluster: Putative uncharacterized protein; n=2;
Photobacterium profundum|Rep: Putative uncharacterized
protein - Photobacterium profundum (Photobacterium sp.
(strain SS9))
Length = 899
Score = 34.7 bits (76), Expect = 1.2
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +3
Query: 153 DXDATPLAGHPRRKSSALERXXACGTGCG 239
+ +A PL G P ++++AL + CG GCG
Sbjct: 34 ELEAAPLTGEPTKRTTALAQCPYCGVGCG 62
>UniRef50_UPI0000EBDA8F Cluster: PREDICTED: hypothetical protein;
n=1; Bos taurus|Rep: PREDICTED: hypothetical protein -
Bos taurus
Length = 358
Score = 34.3 bits (75), Expect = 1.6
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = -1
Query: 148 IRTASSGICRGLWSCSRGRR*VTTSRPASAGWIEQ 44
+R A+ G+C G+ G R VT PA+A W+ Q
Sbjct: 302 VRAAAPGVCLGVGDSPSGPRGVTARLPANASWVPQ 336
>UniRef50_Q8SS65 Cluster: 26S PROTEASOME REGULATORY SUBUNIT 4; n=1;
Encephalitozoon cuniculi|Rep: 26S PROTEASOME REGULATORY
SUBUNIT 4 - Encephalitozoon cuniculi
Length = 795
Score = 32.3 bits (70), Expect = 6.5
Identities = 21/47 (44%), Positives = 27/47 (57%)
Frame = +3
Query: 255 GTPKTIAGXHTHTMXVLLSFGERAELAXDEYIPLSPIMEGFVILKKN 395
G PK ++ THT V+LS RAE DE + S +E +ILKKN
Sbjct: 752 GEPKKLSSVQTHTSPVVLSEKIRAE--TDENV-CSSYIEDVLILKKN 795
>UniRef50_UPI0000DD7908 Cluster: PREDICTED: hypothetical protein;
n=1; Homo sapiens|Rep: PREDICTED: hypothetical protein -
Homo sapiens
Length = 203
Score = 31.9 bits (69), Expect = 8.6
Identities = 18/54 (33%), Positives = 23/54 (42%)
Frame = +3
Query: 168 PLAGHPRRKSSALERXXACGTGCGCYRKSGTPKTIAGXHTHTMXVLLSFGERAE 329
P A HP A + +G G R S P+ +AG H H+ L G R E
Sbjct: 124 PRAAHPAAGERAAQEAGGGSSGGGGDRSSRRPRPVAGPHRHSSARLPRPGGRQE 177
>UniRef50_Q1D0Q6 Cluster: Putative uncharacterized protein; n=2;
Cystobacterineae|Rep: Putative uncharacterized protein -
Myxococcus xanthus (strain DK 1622)
Length = 246
Score = 31.9 bits (69), Expect = 8.6
Identities = 23/84 (27%), Positives = 33/84 (39%), Gaps = 1/84 (1%)
Frame = +3
Query: 15 PVSRARAXGACSIQPALAGLLVVTHRL-PRLQDHNPRQIPLLAVRIGDXDATPLAGHPRR 191
P RA A C++ +AG HR P L ++ G+ +TP GH RR
Sbjct: 3 PCMRAPARSRCALAVVVAG--ATCHRTTPDLPSGRSSEVGWREA--GEGSSTPREGHMRR 58
Query: 192 KSSALERXXACGTGCGCYRKSGTP 263
+ L CG C + + P
Sbjct: 59 WTGLLAVAALCGAACDGKKSTDRP 82
>UniRef50_Q750W3 Cluster: AGL174Wp; n=1; Eremothecium gossypii|Rep:
AGL174Wp - Ashbya gossypii (Yeast) (Eremothecium
gossypii)
Length = 317
Score = 31.9 bits (69), Expect = 8.6
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = -2
Query: 435 RYIFIEQRP*RYP-RFS*ESRIPPLSARVVCTRQXPVLLAXRRTAAPASCE 286
RY+ +Q+ P R + + I +S R VC++Q P L + RRT PA CE
Sbjct: 158 RYLVSDQKAILKPLRANLLANISEVSRRTVCSKQTPELSSNRRT--PARCE 206
>UniRef50_Q6PCP7 Cluster: Probable G-protein coupled receptor 156;
n=6; Euarchontoglires|Rep: Probable G-protein coupled
receptor 156 - Mus musculus (Mouse)
Length = 798
Score = 31.9 bits (69), Expect = 8.6
Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +3
Query: 48 SIQPALAGLLVVTHRLPRLQDHNPR-QIPLLAVRIGDXDATPLAGHPRRKSSALERXXAC 224
++ + +GL+V PRL HN R ++P R +PL+ PRRK LE C
Sbjct: 611 TVSSSQSGLIVQNRDSPRLDHHNARSKVP----RSSSVKPSPLS-EPRRKQGTLEGSKQC 665
Query: 225 GT 230
T
Sbjct: 666 ET 667
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 419,728,786
Number of Sequences: 1657284
Number of extensions: 7611077
Number of successful extensions: 18845
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 18431
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18834
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 30528237263
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -