Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0995
         (508 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF145304-1|AAF08385.1|  919|Drosophila melanogaster 26S proteaso...    77   2e-14
AF132182-1|AAD34770.1|  919|Drosophila melanogaster unknown prot...    77   2e-14
AE014296-3245|AAF49095.2|  919|Drosophila melanogaster CG7762-PA...    77   2e-14
AY880248-1|AAX11175.1|  449|Drosophila melanogaster ligand-gated...    31   1.2  
AE014296-2589|ABC66136.2|  779|Drosophila melanogaster CG33989-P...    31   1.2  
AE014134-735|AAF51016.1| 1026|Drosophila melanogaster CG15431-PA...    28   6.3  

>AF145304-1|AAF08385.1|  919|Drosophila melanogaster 26S proteasome
            regulatory complexsubunit p97 protein.
          Length = 919

 Score = 76.6 bits (180), Expect = 2e-14
 Identities = 35/53 (66%), Positives = 42/53 (79%)
 Frame = +3

Query: 249  KSGTPKTIAGXHTHTMXVLLSFGERAELAXDEYIPLSPIMEGFVILKKNEDSV 407
            ++G PKTI G  THT  VLL+ GERAELA DEY+ L+P+MEGFVILKKN + V
Sbjct: 866  QAGKPKTITGFQTHTTPVLLAIGERAELATDEYLALTPVMEGFVILKKNPNFV 918



 Score = 66.5 bits (155), Expect = 2e-11
 Identities = 31/57 (54%), Positives = 38/57 (66%)
 Frame = +1

Query: 85  LTAFLDCKTIILGKSHYLLYVLATXMQPRWLVTLDENLQPLNVSXRVGQAVDVIGKA 255
           L + LD K +IL +SHYLLY L   MQ R L+T DE L  L V  RVG A+DV+G+A
Sbjct: 811 LVSLLDVKNLILNRSHYLLYTLVPAMQARMLITFDEELNQLQVPVRVGIAIDVVGQA 867


>AF132182-1|AAD34770.1|  919|Drosophila melanogaster unknown protein.
          Length = 919

 Score = 76.6 bits (180), Expect = 2e-14
 Identities = 35/53 (66%), Positives = 42/53 (79%)
 Frame = +3

Query: 249  KSGTPKTIAGXHTHTMXVLLSFGERAELAXDEYIPLSPIMEGFVILKKNEDSV 407
            ++G PKTI G  THT  VLL+ GERAELA DEY+ L+P+MEGFVILKKN + V
Sbjct: 866  QAGKPKTITGFQTHTTPVLLAIGERAELATDEYLALTPVMEGFVILKKNPNFV 918



 Score = 66.5 bits (155), Expect = 2e-11
 Identities = 31/57 (54%), Positives = 38/57 (66%)
 Frame = +1

Query: 85  LTAFLDCKTIILGKSHYLLYVLATXMQPRWLVTLDENLQPLNVSXRVGQAVDVIGKA 255
           L + LD K +IL +SHYLLY L   MQ R L+T DE L  L V  RVG A+DV+G+A
Sbjct: 811 LVSLLDVKNLILNRSHYLLYTLVPAMQARMLITFDEELNQLQVPVRVGIAIDVVGQA 867


>AE014296-3245|AAF49095.2|  919|Drosophila melanogaster CG7762-PA
            protein.
          Length = 919

 Score = 76.6 bits (180), Expect = 2e-14
 Identities = 35/53 (66%), Positives = 42/53 (79%)
 Frame = +3

Query: 249  KSGTPKTIAGXHTHTMXVLLSFGERAELAXDEYIPLSPIMEGFVILKKNEDSV 407
            ++G PKTI G  THT  VLL+ GERAELA DEY+ L+P+MEGFVILKKN + V
Sbjct: 866  QAGKPKTITGFQTHTTPVLLAIGERAELATDEYLALTPVMEGFVILKKNPNFV 918



 Score = 66.5 bits (155), Expect = 2e-11
 Identities = 31/57 (54%), Positives = 38/57 (66%)
 Frame = +1

Query: 85  LTAFLDCKTIILGKSHYLLYVLATXMQPRWLVTLDENLQPLNVSXRVGQAVDVIGKA 255
           L + LD K +IL +SHYLLY L   MQ R L+T DE L  L V  RVG A+DV+G+A
Sbjct: 811 LVSLLDVKNLILNRSHYLLYTLVPAMQARMLITFDEELNQLQVPVRVGIAIDVVGQA 867


>AY880248-1|AAX11175.1|  449|Drosophila melanogaster ligand-gated
           ion channel pHCl-A protein.
          Length = 449

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 2/74 (2%)
 Frame = +3

Query: 87  HRLPRLQDHNP--RQIPLLAVRIGDXDATPLAGHPRRKSSALERXXACGTGCGCYRKSGT 260
           H +      NP  +++P +  RIG   A+PL G  R+ + A     AC T CG      T
Sbjct: 333 HNVVYRPGENPVTQRLPAVLSRIGVILASPLPGEKRQNAGAPNEIVAC-TTCGGSNSPCT 391

Query: 261 PKTIAGXHTHTMXV 302
                G  T T  V
Sbjct: 392 HSANNGCATETCFV 405


>AE014296-2589|ABC66136.2|  779|Drosophila melanogaster CG33989-PF,
           isoform F protein.
          Length = 779

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 2/74 (2%)
 Frame = +3

Query: 87  HRLPRLQDHNP--RQIPLLAVRIGDXDATPLAGHPRRKSSALERXXACGTGCGCYRKSGT 260
           H +      NP  +++P +  RIG   A+PL G  R+ + A     AC T CG      T
Sbjct: 663 HNVVYRPGENPVTQRLPAVLSRIGVILASPLPGEKRQNAGAPNEIVAC-TTCGGSNSPCT 721

Query: 261 PKTIAGXHTHTMXV 302
                G  T T  V
Sbjct: 722 HSANNGCATETCFV 735


>AE014134-735|AAF51016.1| 1026|Drosophila melanogaster CG15431-PA
           protein.
          Length = 1026

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
 Frame = +3

Query: 15  PVSRARAXGACSIQPALAGLLVVTHRLPRLQDHNP-RQIPLLAV 143
           PVS  R  GA S   A    + V+++LP L ++NP ++ PL ++
Sbjct: 591 PVSLERLNGAGSCGSASLATISVSNKLPALGNNNPEKRAPLASL 634


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,868,880
Number of Sequences: 53049
Number of extensions: 351199
Number of successful extensions: 741
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 724
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 741
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1825511424
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)