Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0994
         (693 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023872-1|AAZ86793.1|  334|Drosophila melanogaster GH23213p pro...    29   6.0  
AY071183-1|AAL48805.1|  190|Drosophila melanogaster RE23430p pro...    29   6.0  
AE014298-3147|AAN09679.1|  190|Drosophila melanogaster CG12565-P...    29   6.0  
AE014298-3146|AAF50810.2|  190|Drosophila melanogaster CG12565-P...    29   6.0  
AE014134-1|AAO41164.1|  468|Drosophila melanogaster CG11023-PA p...    29   6.0  

>BT023872-1|AAZ86793.1|  334|Drosophila melanogaster GH23213p
           protein.
          Length = 334

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = -1

Query: 576 IFDPMIPMQFQIRDPAPYVPIQIRIRKD 493
           IF+P +  Q Q+R+ APY+P    +  D
Sbjct: 65  IFNPPVYTQHQVRNEAPYIPTTFDLLSD 92


>AY071183-1|AAL48805.1|  190|Drosophila melanogaster RE23430p
           protein.
          Length = 190

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 25/73 (34%), Positives = 30/73 (41%)
 Frame = -3

Query: 310 LLLLGLAPCCWFDVVAEASHPGHFGAEPDFVLPAPAGNCAXAXDGTXLYSLGQDLPHGVH 131
           LLLL L  C    V  + S  G F  EPDFV+P      A   D T    +      G H
Sbjct: 73  LLLLLLGNCIDLTVSNKISSVGAF--EPDFVIPLENVTIAQGRDATFTCVVNN---LGGH 127

Query: 130 RENXDGKNCAEMV 92
           R + DG +    V
Sbjct: 128 RVSGDGSSAPAKV 140


>AE014298-3147|AAN09679.1|  190|Drosophila melanogaster CG12565-PB,
           isoform B protein.
          Length = 190

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 25/73 (34%), Positives = 30/73 (41%)
 Frame = -3

Query: 310 LLLLGLAPCCWFDVVAEASHPGHFGAEPDFVLPAPAGNCAXAXDGTXLYSLGQDLPHGVH 131
           LLLL L  C    V  + S  G F  EPDFV+P      A   D T    +      G H
Sbjct: 73  LLLLLLGNCIDLTVSNKISSVGAF--EPDFVIPLENVTIAQGRDATFTCVVNN---LGGH 127

Query: 130 RENXDGKNCAEMV 92
           R + DG +    V
Sbjct: 128 RVSGDGSSAPAKV 140


>AE014298-3146|AAF50810.2|  190|Drosophila melanogaster CG12565-PA,
           isoform A protein.
          Length = 190

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 25/73 (34%), Positives = 30/73 (41%)
 Frame = -3

Query: 310 LLLLGLAPCCWFDVVAEASHPGHFGAEPDFVLPAPAGNCAXAXDGTXLYSLGQDLPHGVH 131
           LLLL L  C    V  + S  G F  EPDFV+P      A   D T    +      G H
Sbjct: 73  LLLLLLGNCIDLTVSNKISSVGAF--EPDFVIPLENVTIAQGRDATFTCVVNN---LGGH 127

Query: 130 RENXDGKNCAEMV 92
           R + DG +    V
Sbjct: 128 RVSGDGSSAPAKV 140


>AE014134-1|AAO41164.1|  468|Drosophila melanogaster CG11023-PA
           protein.
          Length = 468

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = -1

Query: 576 IFDPMIPMQFQIRDPAPYVPIQIRIRKD 493
           IF+P +  Q Q+R+ APY+P    +  D
Sbjct: 15  IFNPPVYTQHQVRNEAPYIPTTFDLLSD 42


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,788,308
Number of Sequences: 53049
Number of extensions: 471159
Number of successful extensions: 1075
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1027
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1075
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3026039247
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)