Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0994
         (693 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g11130.1 68418.m01300 exostosin family protein contains Pfam ...    28   6.8  
At1g76470.1 68414.m08895 cinnamoyl-CoA reductase family similar ...    28   6.8  

>At5g11130.1 68418.m01300 exostosin family protein contains Pfam
           profile: PF03016 Exostosin family
          Length = 336

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = +1

Query: 487 IEIFANSYLYWNVRXGVSNLELHRYHWIKDV 579
           I + +N Y YWN   G  +  L  + W  DV
Sbjct: 88  ISLISNRYPYWNRSRGADHFFLSCHDWAPDV 118


>At1g76470.1 68414.m08895 cinnamoyl-CoA reductase family similar to
           cinnamoyl-CoA reductase GB:CAA56103 [Eucalyptus gunnii],
           Pinus taeda [GI:17978649]; contains non-consensus GG
           acceptor splice site at exon 4
          Length = 317

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = -1

Query: 129 AKIXTEKTALRWYNASFLTLISLCTPLV 46
           AK  TE+ AL W   +F  +++LC  ++
Sbjct: 158 AKTLTEREALEWSKRNFADVVTLCPSVI 185


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,754,342
Number of Sequences: 28952
Number of extensions: 214491
Number of successful extensions: 430
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 426
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 430
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1477286152
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)