Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0993
         (672 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8IDT9 Cluster: Putative uncharacterized protein MAL13P...    34   3.6  
UniRef50_UPI000023D1B7 Cluster: hypothetical protein FG04715.1; ...    33   6.3  
UniRef50_Q22H03 Cluster: TBC domain containing protein; n=1; Tet...    33   6.3  

>UniRef50_Q8IDT9 Cluster: Putative uncharacterized protein
           MAL13P1.201; n=1; Plasmodium falciparum 3D7|Rep:
           Putative uncharacterized protein MAL13P1.201 -
           Plasmodium falciparum (isolate 3D7)
          Length = 592

 Score = 33.9 bits (74), Expect = 3.6
 Identities = 13/31 (41%), Positives = 22/31 (70%)
 Frame = +1

Query: 1   RHENNNFRQDVMAYITKYLNKLSNTNFISSK 93
           ++E N ++Q  +A I KYLNK+++T F+  K
Sbjct: 426 KNEENYYKQQGLAQIQKYLNKINSTYFLGKK 456


>UniRef50_UPI000023D1B7 Cluster: hypothetical protein FG04715.1;
           n=1; Gibberella zeae PH-1|Rep: hypothetical protein
           FG04715.1 - Gibberella zeae PH-1
          Length = 866

 Score = 33.1 bits (72), Expect = 6.3
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = -3

Query: 658 LVFESQASTNFCNEIRTQEMLTIDFHGEGITSCN 557
           L F  +ASTN+  EI T + L + F G+G  + N
Sbjct: 164 LTFSIEASTNYVREINTGKYLCVSFGGDGFPNSN 197


>UniRef50_Q22H03 Cluster: TBC domain containing protein; n=1;
           Tetrahymena thermophila SB210|Rep: TBC domain containing
           protein - Tetrahymena thermophila SB210
          Length = 1356

 Score = 33.1 bits (72), Expect = 6.3
 Identities = 17/65 (26%), Positives = 33/65 (50%)
 Frame = -3

Query: 622 NEIRTQEMLTIDFHGEGITSCNKNQTRKIK*LSKSIINRVLSPLKESYHYI*KELEKDSH 443
           N  R +E    DF  E + +C +NQ    + +S+ IIN+ LS +        +++++  +
Sbjct: 236 NTCRGEESQVFDFKCETVANCEENQQINNQQISRKIINKSLSSVNNQKSQQ-QQIQQSEY 294

Query: 442 FVKKN 428
           F+  N
Sbjct: 295 FLNSN 299


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 571,358,896
Number of Sequences: 1657284
Number of extensions: 10518252
Number of successful extensions: 19098
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 18548
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19094
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 51652897375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)