Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0993
         (672 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    23   1.7  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   2.3  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    22   5.3  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   6.9  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    21   6.9  

>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = +2

Query: 440 KMTILF*FFLNIMVRFL*WRKNSINYTFT*LLNFAGLIFI 559
           K+ + F  F+ +    +  RKN +NY FT    F  ++ I
Sbjct: 24  KVLVTFAHFICLFPITINIRKNGLNYNFTKKCYFLRMVLI 63


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 8/37 (21%), Positives = 19/37 (51%)
 Frame = +2

Query: 554 FITRCYSFTVEVNREHFLSTYFITKIGTRLRFEHQCI 664
           F+T+   F V++  +  +  Y   K G+++    +C+
Sbjct: 749 FMTKLLEFDVKLQSDRLMIDYKTQKTGSKIHLFVKCV 785


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = -3

Query: 292 IVFNNDERR*FWLNL 248
           + +NN  R+ +WLN+
Sbjct: 46  LTYNNTNRKYYWLNV 60


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -1

Query: 423 WQCHGHNESCITIYAVV 373
           WQC+   E+C  I + V
Sbjct: 32  WQCNTDEETCTRISSTV 48


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +1

Query: 415 TLPRYFS*QNDYPFLVLS 468
           TLPRY   Q +YP + +S
Sbjct: 416 TLPRYTENQLNYPGITVS 433


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,404
Number of Sequences: 336
Number of extensions: 3170
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17489640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)