Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0992
         (690 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    22   5.4  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    22   5.4  
AM712902-1|CAN84641.1|   95|Tribolium castaneum hypothetical pro...    21   7.2  

>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = -3

Query: 391 ELSDIGEVSVLSTLIAHLI*FANLLLFYLHL 299
           +L+++G+   L     H+   + LL+F +HL
Sbjct: 111 DLTELGQKKYLEKRNRHIFRTSVLLIFVMHL 141


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = -3

Query: 391 ELSDIGEVSVLSTLIAHLI*FANLLLFYLHL 299
           +L+++G+   L     H+   + LL+F +HL
Sbjct: 111 DLTELGQKKYLEKRNRHIFRTSVLLIFVMHL 141


>AM712902-1|CAN84641.1|   95|Tribolium castaneum hypothetical
           protein protein.
          Length = 95

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +3

Query: 501 VKPLHERFRARPKIVEGG*NGRH 569
           +K    RF+ R K+ EG  +GR+
Sbjct: 64  IKRKRVRFQTRVKVQEGSKSGRN 86


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,408
Number of Sequences: 336
Number of extensions: 2545
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18114270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)