Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0991
         (674 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    27   0.14 
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    21   7.0  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    21   9.2  
AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochr...    21   9.2  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 27.1 bits (57), Expect = 0.14
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = -2

Query: 568 CLLYMYIFCIIMYCLWYTATTCCIFIFYSFFC 473
           C+ Y Y   II+ C++Y      IF  + F+C
Sbjct: 284 CIYYFYCALIILLCIYYFCRAFIIFPTH-FYC 314



 Score = 23.8 bits (49), Expect = 1.3
 Identities = 10/31 (32%), Positives = 14/31 (45%)
 Frame = -2

Query: 568 CLLYMYIFCIIMYCLWYTATTCCIFIFYSFF 476
           C  Y Y   II+ C++Y      IF  +  F
Sbjct: 99  CTYYFYYAFIILLCVYYFYYAFIIFTVHLLF 129



 Score = 23.4 bits (48), Expect = 1.7
 Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
 Frame = -2

Query: 568 CLLYMYIFCIIMYCLWYTATTCCIF-IFYSFFCKL 467
           CL Y  +  + + C++Y  +   IF I   F+C L
Sbjct: 198 CLDYFTLHLLFLPCIYYFYSAFIIFTIHLLFYCVL 232



 Score = 21.8 bits (44), Expect = 5.3
 Identities = 11/40 (27%), Positives = 19/40 (47%), Gaps = 5/40 (12%)
 Frame = -2

Query: 556 MYIFCII-MYCLWYTATT----CCIFIFYSFFCKLNGCLE 452
           +++ CI   +C +   T     CC FIF++       CL+
Sbjct: 161 LFLLCIYHFFCAFIIFTMHLLFCCAFIFFNMHLLFLLCLD 200


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 10/32 (31%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
 Frame = -2

Query: 520 YTATTCCIFIFYSFFCKLNGCLEEI--AFSDK 431
           YT T  C+++F      + G L ++   FS K
Sbjct: 286 YTVTFLCLYLFLIITLTIYGLLSQLQAGFSTK 317


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +3

Query: 111 HRWRCIKNKILYTYVLKYVGTEH 179
           HRWR I N + +   ++  G E+
Sbjct: 381 HRWRQIFNMVGFRNAVQETGIEN 403


>AF264718-1|AAF75271.1|  125|Tribolium castaneum putative
          cytochrome P450 monooxigenaseCYP4Q6 protein.
          Length = 125

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +2

Query: 53 IPN*NSLQEVSYTR 94
          IP  N LQE+ YT+
Sbjct: 35 IPTYNDLQELKYTK 48


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,104
Number of Sequences: 336
Number of extensions: 2248
Number of successful extensions: 12
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17593745
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)