Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0990
         (687 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan oxyge...    22   5.4  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    22   5.4  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    22   5.4  
AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    21   7.2  
AM712905-1|CAN84644.1|  102|Tribolium castaneum hypothetical pro...    21   9.5  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    21   9.5  

>AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 228

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 10/27 (37%), Positives = 18/27 (66%)
 Frame = +1

Query: 289 LKNLEEAKAKKIHEIHDLEEKCEELKS 369
           L   EEA+  K ++++DLE++ E  +S
Sbjct: 61  LAEKEEAETLKRYKLNDLEKRREVYES 87


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 10/27 (37%), Positives = 18/27 (66%)
 Frame = +1

Query: 289 LKNLEEAKAKKIHEIHDLEEKCEELKS 369
           L   EEA+  K ++++DLE++ E  +S
Sbjct: 221 LAEKEEAETLKRYKLNDLEKRREVYES 247


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 10/27 (37%), Positives = 18/27 (66%)
 Frame = +1

Query: 289 LKNLEEAKAKKIHEIHDLEEKCEELKS 369
           L   EEA+  K ++++DLE++ E  +S
Sbjct: 221 LAEKEEAETLKRYKLNDLEKRREVYES 247


>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +2

Query: 224 DDSEKIPYLIVKFLFV 271
           DD++K+PYL    L+V
Sbjct: 308 DDTQKVPYLYDDTLWV 323


>AM712905-1|CAN84644.1|  102|Tribolium castaneum hypothetical
           protein protein.
          Length = 102

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -2

Query: 245 KGFFQNHQQGSVPQLL 198
           +G   NH QGS P +L
Sbjct: 72  QGAISNHIQGSKPNIL 87


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = +2

Query: 107 KINKFARLNAKVDDYKDELKVKQNDVKNL 193
           K  ++A+LN K     ++LK +    +NL
Sbjct: 101 KTKEWAKLNNKFQYIDEKLKTRDQKERNL 129


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,972
Number of Sequences: 336
Number of extensions: 2453
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)