Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0990
(687 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41816-1|AAB17063.1| 130|Homo sapiens C-1 protein. 66 1e-10
BC010953-1|AAH10953.1| 134|Homo sapiens prefoldin subunit 4 pro... 66 1e-10
AL133335-1|CAI19316.1| 134|Homo sapiens prefoldin subunit 4 pro... 66 1e-10
U49356-1|AAA90924.1| 2285|Homo sapiens DNA polymerase epsilon ca... 37 0.077
S60080-1|AAA15448.1| 2257|Homo sapiens DNA polymerase epsilon ca... 37 0.077
L09561-1|AAC19148.1| 2286|Homo sapiens DNA polymerase epsilon, c... 37 0.077
AY273166-1|AAP12650.1| 2265|Homo sapiens polymerase (DNA directe... 37 0.077
AF127975-3|AAD44692.1| 2243|Homo sapiens DNA polymerase epsilon ... 37 0.077
AF127975-2|AAD44691.1| 2286|Homo sapiens DNA polymerase epsilon ... 37 0.077
AF127975-1|AAD44690.1| 2297|Homo sapiens DNA polymerase epsilon ... 37 0.077
AB209902-1|BAD93139.1| 983|Homo sapiens DNA polymerase epsilon ... 37 0.077
BC131515-1|AAI31516.1| 632|Homo sapiens GOLGA6 protein protein. 33 0.72
AF266285-1|AAF72535.1| 693|Homo sapiens golgin-like protein pro... 33 0.72
AF263742-1|AAF72196.1| 693|Homo sapiens golgin-like protein pro... 33 0.72
BC110490-1|AAI10491.1| 622|Homo sapiens IL31RA protein protein. 31 3.8
AY499342-1|AAS86447.1| 662|Homo sapiens interleukin 31RA splice... 31 3.8
AY499341-1|AAS86446.1| 764|Homo sapiens interleukin 31RA splice... 31 3.8
AY499339-1|AAS86444.1| 649|Homo sapiens interleukin 31RA splice... 31 3.8
AY358117-1|AAQ88484.1| 732|Homo sapiens GLM-R protein. 31 3.8
AF486620-1|AAM27958.1| 732|Homo sapiens gp130-like monocyte rec... 31 3.8
D86970-1|BAA13206.2| 2067|Homo sapiens KIAA0216 protein. 31 5.1
BC039612-1|AAH39612.1| 2002|Homo sapiens MYO18A protein protein. 31 5.1
AY703984-1|AAV80770.1| 1581|Homo sapiens SP-A receptor subunit S... 31 5.1
AB177860-1|BAD66838.1| 1715|Homo sapiens KIAA0216 splice variant... 31 5.1
AB177858-1|BAD66836.1| 2046|Homo sapiens KIAA0216 splice variant... 31 5.1
Z99127-7|CAI18937.1| 815|Homo sapiens RAB GTPase activating pro... 30 6.7
AL591108-1|CAH70225.1| 815|Homo sapiens RAB GTPase activating p... 30 6.7
AL161671-6|CAI16281.1| 815|Homo sapiens RAB GTPase activating p... 30 6.7
AL157958-1|CAB76100.1| 582|Homo sapiens hypothetical protein pr... 30 6.7
AL136377-4|CAI22935.1| 815|Homo sapiens RAB GTPase activating p... 30 6.7
AL031286-3|CAI22382.1| 815|Homo sapiens RAB GTPase activating p... 30 6.7
AL031286-1|CAI22380.1| 582|Homo sapiens RAB GTPase activating p... 30 6.7
AL022400-4|CAI22878.1| 815|Homo sapiens RAB GTPase activating p... 30 6.7
AL022400-2|CAI22876.1| 582|Homo sapiens RAB GTPase activating p... 30 6.7
AL022171-4|CAI20384.1| 815|Homo sapiens RAB GTPase activating p... 30 6.7
AL022171-2|CAI20382.1| 582|Homo sapiens RAB GTPase activating p... 30 6.7
AK095838-1|BAC04635.1| 815|Homo sapiens protein ( Homo sapiens ... 30 6.7
AK125925-1|BAC86346.1| 623|Homo sapiens protein ( Homo sapiens ... 30 8.9
>U41816-1|AAB17063.1| 130|Homo sapiens C-1 protein.
Length = 130
Score = 66.1 bits (154), Expect = 1e-10
Identities = 29/60 (48%), Positives = 47/60 (78%), Gaps = 1/60 (1%)
Frame = +2
Query: 77 DVHISYEDQQKINKFARLNAKVDDYKDELKVKQNDVKNLEEAVEELSLADDS-EKIPYLI 253
DV++++EDQQKINKFAR +++ + K+E++VK+ ++NLE+A +++ LADD IPY I
Sbjct: 8 DVNVTFEDQQKINKFARNTSRITELKEEIEVKKKQLQNLEDACDDIMLADDDCLMIPYQI 67
Score = 47.2 bits (107), Expect = 5e-05
Identities = 24/59 (40%), Positives = 34/59 (57%)
Frame = +1
Query: 241 PLPYCEIFICQNLEITLKNLEEAKAKKIHEIHDLEEKCEELKSQMSDLKAHLYGKFGSH 417
P ++FI + E T + LEEAK EI LE + E ++ ++DLK LY KFGS+
Sbjct: 64 PYQIGDVFISHSQEETQEMLEEAKKNLQEEIDALESRVESIQRVLADLKVQLYAKFGSN 122
>BC010953-1|AAH10953.1| 134|Homo sapiens prefoldin subunit 4
protein.
Length = 134
Score = 66.1 bits (154), Expect = 1e-10
Identities = 29/60 (48%), Positives = 47/60 (78%), Gaps = 1/60 (1%)
Frame = +2
Query: 77 DVHISYEDQQKINKFARLNAKVDDYKDELKVKQNDVKNLEEAVEELSLADDS-EKIPYLI 253
DV++++EDQQKINKFAR +++ + K+E++VK+ ++NLE+A +++ LADD IPY I
Sbjct: 12 DVNVTFEDQQKINKFARNTSRITELKEEIEVKKKQLQNLEDACDDIMLADDDCLMIPYQI 71
Score = 47.2 bits (107), Expect = 5e-05
Identities = 24/59 (40%), Positives = 34/59 (57%)
Frame = +1
Query: 241 PLPYCEIFICQNLEITLKNLEEAKAKKIHEIHDLEEKCEELKSQMSDLKAHLYGKFGSH 417
P ++FI + E T + LEEAK EI LE + E ++ ++DLK LY KFGS+
Sbjct: 68 PYQIGDVFISHSQEETQEMLEEAKKNLQEEIDALESRVESIQRVLADLKVQLYAKFGSN 126
>AL133335-1|CAI19316.1| 134|Homo sapiens prefoldin subunit 4
protein.
Length = 134
Score = 66.1 bits (154), Expect = 1e-10
Identities = 29/60 (48%), Positives = 47/60 (78%), Gaps = 1/60 (1%)
Frame = +2
Query: 77 DVHISYEDQQKINKFARLNAKVDDYKDELKVKQNDVKNLEEAVEELSLADDS-EKIPYLI 253
DV++++EDQQKINKFAR +++ + K+E++VK+ ++NLE+A +++ LADD IPY I
Sbjct: 12 DVNVTFEDQQKINKFARNTSRITELKEEIEVKKKQLQNLEDACDDIMLADDDCLMIPYQI 71
Score = 47.2 bits (107), Expect = 5e-05
Identities = 24/59 (40%), Positives = 34/59 (57%)
Frame = +1
Query: 241 PLPYCEIFICQNLEITLKNLEEAKAKKIHEIHDLEEKCEELKSQMSDLKAHLYGKFGSH 417
P ++FI + E T + LEEAK EI LE + E ++ ++DLK LY KFGS+
Sbjct: 68 PYQIGDVFISHSQEETQEMLEEAKKNLQEEIDALESRVESIQRVLADLKVQLYAKFGSN 126
>U49356-1|AAA90924.1| 2285|Homo sapiens DNA polymerase epsilon
catalytic subunit protein.
Length = 2285
Score = 36.7 bits (81), Expect = 0.077
Identities = 16/43 (37%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Frame = +1
Query: 262 FICQNLEITLKN-LEEAKAKKIHEIHDLEEKCEELKSQMSDLK 387
F+ Q +E TL++ LEE + + ++ + EE C+E+KS+++ LK
Sbjct: 568 FLLQRVEKTLRHALEEEEKVPVEQVTNFEEVCDEIKSKLASLK 610
>S60080-1|AAA15448.1| 2257|Homo sapiens DNA polymerase epsilon
catalytic subunit protein.
Length = 2257
Score = 36.7 bits (81), Expect = 0.077
Identities = 16/43 (37%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Frame = +1
Query: 262 FICQNLEITLKN-LEEAKAKKIHEIHDLEEKCEELKSQMSDLK 387
F+ Q +E TL++ LEE + + ++ + EE C+E+KS+++ LK
Sbjct: 540 FLLQRVEKTLRHALEEEEKVPVEQVTNFEEVCDEIKSKLASLK 582
>L09561-1|AAC19148.1| 2286|Homo sapiens DNA polymerase epsilon,
catalytic polypeptide protein.
Length = 2286
Score = 36.7 bits (81), Expect = 0.077
Identities = 16/43 (37%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Frame = +1
Query: 262 FICQNLEITLKN-LEEAKAKKIHEIHDLEEKCEELKSQMSDLK 387
F+ Q +E TL++ LEE + + ++ + EE C+E+KS+++ LK
Sbjct: 569 FLLQRVEKTLRHALEEEEKVPVEQVTNFEEVCDEIKSKLASLK 611
>AY273166-1|AAP12650.1| 2265|Homo sapiens polymerase (DNA directed),
epsilon protein.
Length = 2265
Score = 36.7 bits (81), Expect = 0.077
Identities = 16/43 (37%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Frame = +1
Query: 262 FICQNLEITLKN-LEEAKAKKIHEIHDLEEKCEELKSQMSDLK 387
F+ Q +E TL++ LEE + + ++ + EE C+E+KS+++ LK
Sbjct: 548 FLLQRVEKTLRHALEEEEKVPVEQVTNFEEVCDEIKSKLASLK 590
>AF127975-3|AAD44692.1| 2243|Homo sapiens DNA polymerase epsilon
catalytic subunit protein isoform c protein.
Length = 2243
Score = 36.7 bits (81), Expect = 0.077
Identities = 16/43 (37%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Frame = +1
Query: 262 FICQNLEITLKN-LEEAKAKKIHEIHDLEEKCEELKSQMSDLK 387
F+ Q +E TL++ LEE + + ++ + EE C+E+KS+++ LK
Sbjct: 526 FLLQRVEKTLRHALEEEEKVPVEQVTNFEEVCDEIKSKLASLK 568
>AF127975-2|AAD44691.1| 2286|Homo sapiens DNA polymerase epsilon
catalytic subunit protein isoform b protein.
Length = 2286
Score = 36.7 bits (81), Expect = 0.077
Identities = 16/43 (37%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Frame = +1
Query: 262 FICQNLEITLKN-LEEAKAKKIHEIHDLEEKCEELKSQMSDLK 387
F+ Q +E TL++ LEE + + ++ + EE C+E+KS+++ LK
Sbjct: 569 FLLQRVEKTLRHALEEEEKVPVEQVTNFEEVCDEIKSKLASLK 611
>AF127975-1|AAD44690.1| 2297|Homo sapiens DNA polymerase epsilon
catalytic subunit protein isoform a protein.
Length = 2297
Score = 36.7 bits (81), Expect = 0.077
Identities = 16/43 (37%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Frame = +1
Query: 262 FICQNLEITLKN-LEEAKAKKIHEIHDLEEKCEELKSQMSDLK 387
F+ Q +E TL++ LEE + + ++ + EE C+E+KS+++ LK
Sbjct: 580 FLLQRVEKTLRHALEEEEKVPVEQVTNFEEVCDEIKSKLASLK 622
>AB209902-1|BAD93139.1| 983|Homo sapiens DNA polymerase epsilon
catalytic subunit variant protein.
Length = 983
Score = 36.7 bits (81), Expect = 0.077
Identities = 16/43 (37%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Frame = +1
Query: 262 FICQNLEITLKN-LEEAKAKKIHEIHDLEEKCEELKSQMSDLK 387
F+ Q +E TL++ LEE + + ++ + EE C+E+KS+++ LK
Sbjct: 377 FLLQRVEKTLRHALEEEEKVPVEQVTNFEEVCDEIKSKLASLK 419
>BC131515-1|AAI31516.1| 632|Homo sapiens GOLGA6 protein protein.
Length = 632
Score = 33.5 bits (73), Expect = 0.72
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +1
Query: 277 LEITLKNLEEAKAKKIHEIHDLEEKCEELKSQMSD 381
+ + + L+E K + IH I +LE ELK+QM++
Sbjct: 250 MSVEARTLKEEKKRDIHRIQELERSLSELKNQMAE 284
>AF266285-1|AAF72535.1| 693|Homo sapiens golgin-like protein
protein.
Length = 693
Score = 33.5 bits (73), Expect = 0.72
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +1
Query: 277 LEITLKNLEEAKAKKIHEIHDLEEKCEELKSQMSD 381
+ + + L+E K + IH I +LE ELK+QM++
Sbjct: 250 MSVEARTLKEEKKRDIHRIQELERSLSELKNQMAE 284
>AF263742-1|AAF72196.1| 693|Homo sapiens golgin-like protein
protein.
Length = 693
Score = 33.5 bits (73), Expect = 0.72
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +1
Query: 277 LEITLKNLEEAKAKKIHEIHDLEEKCEELKSQMSD 381
+ + + L+E K + IH I +LE ELK+QM++
Sbjct: 250 MSVEARTLKEEKKRDIHRIQELERSLSELKNQMAE 284
>BC110490-1|AAI10491.1| 622|Homo sapiens IL31RA protein protein.
Length = 622
Score = 31.1 bits (67), Expect = 3.8
Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Frame = +2
Query: 23 ILIVNMSTTAKGTFQPDSDVHISYEDQQKINKFARLNAKVDDYKDELKVKQND--VKNLE 196
+LI+ + T A G +P+ H+ + + + DD+KD+L +K++D V +
Sbjct: 421 LLILIILTVAYGLKKPNKLTHLCWPTVPNPAESSIATWHGDDFKDKLNLKESDDSVNTED 480
Query: 197 EAVEELSLADDSEKIPYLIVKF 262
++ S D I L+V F
Sbjct: 481 RILKPCSTPSDKLVIDKLVVNF 502
>AY499342-1|AAS86447.1| 662|Homo sapiens interleukin 31RA splice
variant x4 protein.
Length = 662
Score = 31.1 bits (67), Expect = 3.8
Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Frame = +2
Query: 23 ILIVNMSTTAKGTFQPDSDVHISYEDQQKINKFARLNAKVDDYKDELKVKQND--VKNLE 196
+LI+ + T A G +P+ H+ + + + DD+KD+L +K++D V +
Sbjct: 544 LLILIILTVAYGLKKPNKLTHLCWPTVPNPAESSIATWHGDDFKDKLNLKESDDSVNTED 603
Query: 197 EAVEELSLADDSEKIPYLIVKF 262
++ S D I L+V F
Sbjct: 604 RILKPCSTPSDKLVIDKLVVNF 625
>AY499341-1|AAS86446.1| 764|Homo sapiens interleukin 31RA splice
variant x3 protein.
Length = 764
Score = 31.1 bits (67), Expect = 3.8
Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Frame = +2
Query: 23 ILIVNMSTTAKGTFQPDSDVHISYEDQQKINKFARLNAKVDDYKDELKVKQND--VKNLE 196
+LI+ + T A G +P+ H+ + + + DD+KD+L +K++D V +
Sbjct: 563 LLILIILTVAYGLKKPNKLTHLCWPTVPNPAESSIATWHGDDFKDKLNLKESDDSVNTED 622
Query: 197 EAVEELSLADDSEKIPYLIVKF 262
++ S D I L+V F
Sbjct: 623 RILKPCSTPSDKLVIDKLVVNF 644
>AY499339-1|AAS86444.1| 649|Homo sapiens interleukin 31RA splice
variant x1 protein.
Length = 649
Score = 31.1 bits (67), Expect = 3.8
Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Frame = +2
Query: 23 ILIVNMSTTAKGTFQPDSDVHISYEDQQKINKFARLNAKVDDYKDELKVKQND--VKNLE 196
+LI+ + T A G +P+ H+ + + + DD+KD+L +K++D V +
Sbjct: 531 LLILIILTVAYGLKKPNKLTHLCWPTVPNPAESSIATWHGDDFKDKLNLKESDDSVNTED 590
Query: 197 EAVEELSLADDSEKIPYLIVKF 262
++ S D I L+V F
Sbjct: 591 RILKPCSTPSDKLVIDKLVVNF 612
>AY358117-1|AAQ88484.1| 732|Homo sapiens GLM-R protein.
Length = 732
Score = 31.1 bits (67), Expect = 3.8
Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Frame = +2
Query: 23 ILIVNMSTTAKGTFQPDSDVHISYEDQQKINKFARLNAKVDDYKDELKVKQND--VKNLE 196
+LI+ + T A G +P+ H+ + + + DD+KD+L +K++D V +
Sbjct: 531 LLILIILTVAYGLKKPNKLTHLCWPTVPNPAESSIATWHGDDFKDKLNLKESDDSVNTED 590
Query: 197 EAVEELSLADDSEKIPYLIVKF 262
++ S D I L+V F
Sbjct: 591 RILKPCSTPSDKLVIDKLVVNF 612
>AF486620-1|AAM27958.1| 732|Homo sapiens gp130-like monocyte
receptor protein.
Length = 732
Score = 31.1 bits (67), Expect = 3.8
Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Frame = +2
Query: 23 ILIVNMSTTAKGTFQPDSDVHISYEDQQKINKFARLNAKVDDYKDELKVKQND--VKNLE 196
+LI+ + T A G +P+ H+ + + + DD+KD+L +K++D V +
Sbjct: 531 LLILIILTVAYGLKKPNKLTHLCWPTVPNPAESSIATWHGDDFKDKLNLKESDDSVNTED 590
Query: 197 EAVEELSLADDSEKIPYLIVKF 262
++ S D I L+V F
Sbjct: 591 RILKPCSTPSDKLVIDKLVVNF 612
>D86970-1|BAA13206.2| 2067|Homo sapiens KIAA0216 protein.
Length = 2067
Score = 30.7 bits (66), Expect = 5.1
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = +1
Query: 271 QNLEITLKNLEEAKAKKIHEIHDLEEKCEELKSQMSDLKAHLYGK 405
+ LE L +L+ + + L++KC+ L +++ D K HL G+
Sbjct: 1418 RQLERRLGDLQADSEESQRALQQLKKKCQRLTAELQDTKLHLEGQ 1462
>BC039612-1|AAH39612.1| 2002|Homo sapiens MYO18A protein protein.
Length = 2002
Score = 30.7 bits (66), Expect = 5.1
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = +1
Query: 271 QNLEITLKNLEEAKAKKIHEIHDLEEKCEELKSQMSDLKAHLYGK 405
+ LE L +L+ + + L++KC+ L +++ D K HL G+
Sbjct: 1405 RQLERRLGDLQADSEESQRALQQLKKKCQRLTAELQDTKLHLEGQ 1449
>AY703984-1|AAV80770.1| 1581|Homo sapiens SP-A receptor subunit
SP-R210 alphaS protein.
Length = 1581
Score = 30.7 bits (66), Expect = 5.1
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = +1
Query: 271 QNLEITLKNLEEAKAKKIHEIHDLEEKCEELKSQMSDLKAHLYGK 405
+ LE L +L+ + + L++KC+ L +++ D K HL G+
Sbjct: 947 RQLERRLGDLQADSEESQRALQQLKKKCQRLTAELQDTKLHLEGQ 991
>AB177860-1|BAD66838.1| 1715|Homo sapiens KIAA0216 splice variant 2
protein.
Length = 1715
Score = 30.7 bits (66), Expect = 5.1
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = +1
Query: 271 QNLEITLKNLEEAKAKKIHEIHDLEEKCEELKSQMSDLKAHLYGK 405
+ LE L +L+ + + L++KC+ L +++ D K HL G+
Sbjct: 1081 RQLERRLGDLQADSEESQRALQQLKKKCQRLTAELQDTKLHLEGQ 1125
>AB177858-1|BAD66836.1| 2046|Homo sapiens KIAA0216 splice variant 1
protein.
Length = 2046
Score = 30.7 bits (66), Expect = 5.1
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = +1
Query: 271 QNLEITLKNLEEAKAKKIHEIHDLEEKCEELKSQMSDLKAHLYGK 405
+ LE L +L+ + + L++KC+ L +++ D K HL G+
Sbjct: 1397 RQLERRLGDLQADSEESQRALQQLKKKCQRLTAELQDTKLHLEGQ 1441
>Z99127-7|CAI18937.1| 815|Homo sapiens RAB GTPase activating
protein 1-like protein.
Length = 815
Score = 30.3 bits (65), Expect = 6.7
Identities = 19/58 (32%), Positives = 33/58 (56%)
Frame = +2
Query: 71 DSDVHISYEDQQKINKFARLNAKVDDYKDELKVKQNDVKNLEEAVEELSLADDSEKIP 244
DS ++ E+ + ++A N+ + K +LK+ N + LE+A+EE + DSEK P
Sbjct: 15 DSVATMNSEEFVLVPQYADDNSTKHEEKPQLKIVSNGDEQLEKAMEE--ILRDSEKRP 70
>AL591108-1|CAH70225.1| 815|Homo sapiens RAB GTPase activating
protein 1-like protein.
Length = 815
Score = 30.3 bits (65), Expect = 6.7
Identities = 19/58 (32%), Positives = 33/58 (56%)
Frame = +2
Query: 71 DSDVHISYEDQQKINKFARLNAKVDDYKDELKVKQNDVKNLEEAVEELSLADDSEKIP 244
DS ++ E+ + ++A N+ + K +LK+ N + LE+A+EE + DSEK P
Sbjct: 15 DSVATMNSEEFVLVPQYADDNSTKHEEKPQLKIVSNGDEQLEKAMEE--ILRDSEKRP 70
>AL161671-6|CAI16281.1| 815|Homo sapiens RAB GTPase activating
protein 1-like protein.
Length = 815
Score = 30.3 bits (65), Expect = 6.7
Identities = 19/58 (32%), Positives = 33/58 (56%)
Frame = +2
Query: 71 DSDVHISYEDQQKINKFARLNAKVDDYKDELKVKQNDVKNLEEAVEELSLADDSEKIP 244
DS ++ E+ + ++A N+ + K +LK+ N + LE+A+EE + DSEK P
Sbjct: 15 DSVATMNSEEFVLVPQYADDNSTKHEEKPQLKIVSNGDEQLEKAMEE--ILRDSEKRP 70
>AL157958-1|CAB76100.1| 582|Homo sapiens hypothetical protein
protein.
Length = 582
Score = 30.3 bits (65), Expect = 6.7
Identities = 19/58 (32%), Positives = 33/58 (56%)
Frame = +2
Query: 71 DSDVHISYEDQQKINKFARLNAKVDDYKDELKVKQNDVKNLEEAVEELSLADDSEKIP 244
DS ++ E+ + ++A N+ + K +LK+ N + LE+A+EE + DSEK P
Sbjct: 15 DSVATMNSEEFVLVPQYADDNSTKHEEKPQLKIVSNGDEQLEKAMEE--ILRDSEKRP 70
>AL136377-4|CAI22935.1| 815|Homo sapiens RAB GTPase activating
protein 1-like protein.
Length = 815
Score = 30.3 bits (65), Expect = 6.7
Identities = 19/58 (32%), Positives = 33/58 (56%)
Frame = +2
Query: 71 DSDVHISYEDQQKINKFARLNAKVDDYKDELKVKQNDVKNLEEAVEELSLADDSEKIP 244
DS ++ E+ + ++A N+ + K +LK+ N + LE+A+EE + DSEK P
Sbjct: 15 DSVATMNSEEFVLVPQYADDNSTKHEEKPQLKIVSNGDEQLEKAMEE--ILRDSEKRP 70
>AL031286-3|CAI22382.1| 815|Homo sapiens RAB GTPase activating
protein 1-like protein.
Length = 815
Score = 30.3 bits (65), Expect = 6.7
Identities = 19/58 (32%), Positives = 33/58 (56%)
Frame = +2
Query: 71 DSDVHISYEDQQKINKFARLNAKVDDYKDELKVKQNDVKNLEEAVEELSLADDSEKIP 244
DS ++ E+ + ++A N+ + K +LK+ N + LE+A+EE + DSEK P
Sbjct: 15 DSVATMNSEEFVLVPQYADDNSTKHEEKPQLKIVSNGDEQLEKAMEE--ILRDSEKRP 70
>AL031286-1|CAI22380.1| 582|Homo sapiens RAB GTPase activating
protein 1-like protein.
Length = 582
Score = 30.3 bits (65), Expect = 6.7
Identities = 19/58 (32%), Positives = 33/58 (56%)
Frame = +2
Query: 71 DSDVHISYEDQQKINKFARLNAKVDDYKDELKVKQNDVKNLEEAVEELSLADDSEKIP 244
DS ++ E+ + ++A N+ + K +LK+ N + LE+A+EE + DSEK P
Sbjct: 15 DSVATMNSEEFVLVPQYADDNSTKHEEKPQLKIVSNGDEQLEKAMEE--ILRDSEKRP 70
>AL022400-4|CAI22878.1| 815|Homo sapiens RAB GTPase activating
protein 1-like protein.
Length = 815
Score = 30.3 bits (65), Expect = 6.7
Identities = 19/58 (32%), Positives = 33/58 (56%)
Frame = +2
Query: 71 DSDVHISYEDQQKINKFARLNAKVDDYKDELKVKQNDVKNLEEAVEELSLADDSEKIP 244
DS ++ E+ + ++A N+ + K +LK+ N + LE+A+EE + DSEK P
Sbjct: 15 DSVATMNSEEFVLVPQYADDNSTKHEEKPQLKIVSNGDEQLEKAMEE--ILRDSEKRP 70
>AL022400-2|CAI22876.1| 582|Homo sapiens RAB GTPase activating
protein 1-like protein.
Length = 582
Score = 30.3 bits (65), Expect = 6.7
Identities = 19/58 (32%), Positives = 33/58 (56%)
Frame = +2
Query: 71 DSDVHISYEDQQKINKFARLNAKVDDYKDELKVKQNDVKNLEEAVEELSLADDSEKIP 244
DS ++ E+ + ++A N+ + K +LK+ N + LE+A+EE + DSEK P
Sbjct: 15 DSVATMNSEEFVLVPQYADDNSTKHEEKPQLKIVSNGDEQLEKAMEE--ILRDSEKRP 70
>AL022171-4|CAI20384.1| 815|Homo sapiens RAB GTPase activating
protein 1-like protein.
Length = 815
Score = 30.3 bits (65), Expect = 6.7
Identities = 19/58 (32%), Positives = 33/58 (56%)
Frame = +2
Query: 71 DSDVHISYEDQQKINKFARLNAKVDDYKDELKVKQNDVKNLEEAVEELSLADDSEKIP 244
DS ++ E+ + ++A N+ + K +LK+ N + LE+A+EE + DSEK P
Sbjct: 15 DSVATMNSEEFVLVPQYADDNSTKHEEKPQLKIVSNGDEQLEKAMEE--ILRDSEKRP 70
>AL022171-2|CAI20382.1| 582|Homo sapiens RAB GTPase activating
protein 1-like protein.
Length = 582
Score = 30.3 bits (65), Expect = 6.7
Identities = 19/58 (32%), Positives = 33/58 (56%)
Frame = +2
Query: 71 DSDVHISYEDQQKINKFARLNAKVDDYKDELKVKQNDVKNLEEAVEELSLADDSEKIP 244
DS ++ E+ + ++A N+ + K +LK+ N + LE+A+EE + DSEK P
Sbjct: 15 DSVATMNSEEFVLVPQYADDNSTKHEEKPQLKIVSNGDEQLEKAMEE--ILRDSEKRP 70
>AK095838-1|BAC04635.1| 815|Homo sapiens protein ( Homo sapiens
cDNA FLJ38519 fis, clone HCHON2000751, moderately
similar to Rab6 GTPase activating protein. ).
Length = 815
Score = 30.3 bits (65), Expect = 6.7
Identities = 19/58 (32%), Positives = 33/58 (56%)
Frame = +2
Query: 71 DSDVHISYEDQQKINKFARLNAKVDDYKDELKVKQNDVKNLEEAVEELSLADDSEKIP 244
DS ++ E+ + ++A N+ + K +LK+ N + LE+A+EE + DSEK P
Sbjct: 15 DSVATMNSEEFVLVPQYADDNSTKHEEKPQLKIVSNGDEQLEKAMEE--ILRDSEKRP 70
>AK125925-1|BAC86346.1| 623|Homo sapiens protein ( Homo sapiens
cDNA FLJ43937 fis, clone TESTI4013924. ).
Length = 623
Score = 29.9 bits (64), Expect = 8.9
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +1
Query: 250 YCEIFICQNLEITLKNLEEAKAKKIHEIHDLEEKCEELKSQMSDLK 387
Y + +NL L ++ +A + E+H EEK ++KS +DL+
Sbjct: 169 YAALQQIENLRKELNDVLTKRALQEEELHSKEEKLRDIKSHQADLE 214
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,524,982
Number of Sequences: 237096
Number of extensions: 1267051
Number of successful extensions: 7387
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 6964
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7380
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7839245960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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