Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0990
(687 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41543-4|AAM69116.1| 575|Caenorhabditis elegans Hypothetical pr... 38 0.007
U41543-3|AAB37024.1| 572|Caenorhabditis elegans Hypothetical pr... 38 0.007
Z73102-5|CAA97410.1| 126|Caenorhabditis elegans Hypothetical pr... 37 0.012
AF292051-1|AAG41147.1| 126|Caenorhabditis elegans 4M79 protein. 37 0.012
U61953-6|AAO91706.1| 341|Caenorhabditis elegans Hypothetical pr... 34 0.083
Z49129-1|CAA88962.1| 262|Caenorhabditis elegans Hypothetical pr... 33 0.19
Z71186-2|CAA94915.1| 203|Caenorhabditis elegans Hypothetical pr... 30 1.8
AL117204-9|CAB55124.1| 358|Caenorhabditis elegans Hypothetical ... 30 1.8
AC024777-3|AAF60562.3| 563|Caenorhabditis elegans Hypothetical ... 30 1.8
U13070-7|AAC46638.1| 414|Caenorhabditis elegans Rabaptin (rab e... 29 2.4
AC024859-1|ABA00161.2| 443|Caenorhabditis elegans Hypothetical ... 29 2.4
Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical pr... 29 3.1
X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy ch... 29 3.1
U23517-8|AAM98041.1| 605|Caenorhabditis elegans A kinase anchor... 29 3.1
U23517-7|AAM98040.1| 1284|Caenorhabditis elegans A kinase anchor... 29 3.1
U23517-6|AAB93340.1| 1280|Caenorhabditis elegans A kinase anchor... 29 3.1
AF067608-15|AAO38679.1| 470|Caenorhabditis elegans Hypothetical... 29 3.1
AF067608-14|AAK95864.1| 551|Caenorhabditis elegans Hypothetical... 29 3.1
AF045926-1|AAC24507.1| 1280|Caenorhabditis elegans A kinase anch... 29 3.1
Z74475-2|CAA98958.4| 385|Caenorhabditis elegans Hypothetical pr... 29 4.1
AC024810-9|AAF60766.1| 547|Caenorhabditis elegans Hypothetical ... 29 4.1
U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myos... 28 5.4
Z83123-7|CAB05612.2| 332|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical p... 28 7.2
Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical pr... 28 7.2
U58746-11|AAB00630.1| 314|Caenorhabditis elegans Hypothetical p... 28 7.2
U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock prot... 28 7.2
U50309-6|AAG24134.1| 247|Caenorhabditis elegans Hypothetical pr... 28 7.2
J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy ch... 28 7.2
AF016669-2|AAB66099.2| 455|Caenorhabditis elegans Hypothetical ... 28 7.2
Z69902-10|CAI59119.1| 4053|Caenorhabditis elegans Hypothetical p... 27 9.5
Z69902-9|CAH10779.1| 4061|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z69902-8|CAA93765.2| 4064|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z37139-11|CAO82010.1| 487|Caenorhabditis elegans Hypothetical p... 27 9.5
Z34799-9|CAO82035.1| 487|Caenorhabditis elegans Hypothetical pr... 27 9.5
AY551966-1|AAS65430.1| 4064|Caenorhabditis elegans TRR-1 protein. 27 9.5
AL110485-26|CAB60359.3| 779|Caenorhabditis elegans Hypothetical... 27 9.5
AF003138-5|AAL77178.1| 488|Caenorhabditis elegans Hypothetical ... 27 9.5
AF003138-4|ABD94108.1| 400|Caenorhabditis elegans Hypothetical ... 27 9.5
AF003138-2|AAM15567.1| 546|Caenorhabditis elegans Hypothetical ... 27 9.5
>U41543-4|AAM69116.1| 575|Caenorhabditis elegans Hypothetical
protein F46H5.7b protein.
Length = 575
Score = 37.9 bits (84), Expect = 0.007
Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Frame = +2
Query: 32 VNMSTTAKGTFQPDSDVHISYEDQQKI-NKFARLNAKVDDYKDELKVKQNDVKNLEEAVE 208
VN+S ++G DS+ + +K+ N+ L +V +YK +L Q VKNLE+ +E
Sbjct: 153 VNISEESEGR---DSEKEKNDRQLEKLRNRNDELKIRVKEYKSDLSAAQLKVKNLEKKLE 209
Query: 209 ELSLADDSEK 238
AD EK
Sbjct: 210 SAQSADSEEK 219
>U41543-3|AAB37024.1| 572|Caenorhabditis elegans Hypothetical
protein F46H5.7a protein.
Length = 572
Score = 37.9 bits (84), Expect = 0.007
Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Frame = +2
Query: 32 VNMSTTAKGTFQPDSDVHISYEDQQKI-NKFARLNAKVDDYKDELKVKQNDVKNLEEAVE 208
VN+S ++G DS+ + +K+ N+ L +V +YK +L Q VKNLE+ +E
Sbjct: 153 VNISEESEGR---DSEKEKNDRQLEKLRNRNDELKIRVKEYKSDLSAAQLKVKNLEKKLE 209
Query: 209 ELSLADDSEK 238
AD EK
Sbjct: 210 SAQSADSEEK 219
>Z73102-5|CAA97410.1| 126|Caenorhabditis elegans Hypothetical
protein B0035.4 protein.
Length = 126
Score = 37.1 bits (82), Expect = 0.012
Identities = 18/50 (36%), Positives = 28/50 (56%)
Frame = +2
Query: 86 ISYEDQQKINKFARLNAKVDDYKDELKVKQNDVKNLEEAVEELSLADDSE 235
+S EDQ +NKFAR K ++K + + N+ EA +E+ L DD +
Sbjct: 7 VSAEDQALLNKFARSYQTQTQLKADVKEAKTLIDNINEASDEILLLDDED 56
>AF292051-1|AAG41147.1| 126|Caenorhabditis elegans 4M79 protein.
Length = 126
Score = 37.1 bits (82), Expect = 0.012
Identities = 18/50 (36%), Positives = 28/50 (56%)
Frame = +2
Query: 86 ISYEDQQKINKFARLNAKVDDYKDELKVKQNDVKNLEEAVEELSLADDSE 235
+S EDQ +NKFAR K ++K + + N+ EA +E+ L DD +
Sbjct: 7 VSAEDQALLNKFARSYQTQTQLKADVKEAKTLIDNINEASDEILLLDDED 56
>U61953-6|AAO91706.1| 341|Caenorhabditis elegans Hypothetical
protein R08C7.9 protein.
Length = 341
Score = 34.3 bits (75), Expect = 0.083
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +2
Query: 119 FARLNAKVDDYKDELKVKQNDVKN-LEEAVEELSLADDSEKIPYLIVKFL 265
FA ++ + D + L VK V ++EA++ AD E+IP + VKFL
Sbjct: 53 FALISKRTKDQAERLNVKMKSVDVWIDEAIKIFIWADSDERIPSVFVKFL 102
>Z49129-1|CAA88962.1| 262|Caenorhabditis elegans Hypothetical
protein T05B9.1 protein.
Length = 262
Score = 33.1 bits (72), Expect = 0.19
Identities = 20/39 (51%), Positives = 24/39 (61%)
Frame = +1
Query: 280 EITLKNLEEAKAKKIHEIHDLEEKCEELKSQMSDLKAHL 396
E+T L +AK++K LEE EELKSQ DLKA L
Sbjct: 44 ELTQDKLNDAKSRK-----KLEESMEELKSQNLDLKAQL 77
>Z71186-2|CAA94915.1| 203|Caenorhabditis elegans Hypothetical
protein F23D12.3 protein.
Length = 203
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/34 (44%), Positives = 24/34 (70%)
Frame = +3
Query: 42 QLQLKELFSQTLMYTFHMKINKKLTSLLVSMLKL 143
QL K ++S+TL + H+K+ K+T +LVS+L L
Sbjct: 28 QLVYKRVWSETLSF-IHLKMMNKITVILVSLLIL 60
>AL117204-9|CAB55124.1| 358|Caenorhabditis elegans Hypothetical
protein Y116A8C.18 protein.
Length = 358
Score = 29.9 bits (64), Expect = 1.8
Identities = 14/45 (31%), Positives = 29/45 (64%)
Frame = +1
Query: 271 QNLEITLKNLEEAKAKKIHEIHDLEEKCEELKSQMSDLKAHLYGK 405
++L T+K+LE K ++ H+ + ++ EELK ++ +L+A Y +
Sbjct: 100 KHLLTTMKSLETEKMEQEHKTKIMNKEVEELKIRVKELEATDYSE 144
>AC024777-3|AAF60562.3| 563|Caenorhabditis elegans Hypothetical
protein Y42H9AR.3 protein.
Length = 563
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/66 (27%), Positives = 32/66 (48%)
Frame = +2
Query: 26 LIVNMSTTAKGTFQPDSDVHISYEDQQKINKFARLNAKVDDYKDELKVKQNDVKNLEEAV 205
L+ S+ T Q D H YE ++++ KF A DE+ + + ++K +EE +
Sbjct: 501 LVFEPSSIEDDTIQTD---HPLYEQREQLRKFL-FQASATGKLDEMDILERNLKEIEEEM 556
Query: 206 EELSLA 223
L L+
Sbjct: 557 MRLGLS 562
>U13070-7|AAC46638.1| 414|Caenorhabditis elegans Rabaptin (rab
effector) protein 5 protein.
Length = 414
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/41 (36%), Positives = 26/41 (63%)
Frame = +2
Query: 107 KINKFARLNAKVDDYKDELKVKQNDVKNLEEAVEELSLADD 229
++N+ A+ NAK + DEL K + K++E ++L+LA D
Sbjct: 99 QVNEAAKANAKSEQRLDELSAKHD--KSIEVFTDQLNLARD 137
>AC024859-1|ABA00161.2| 443|Caenorhabditis elegans Hypothetical
protein Y71H2AM.9 protein.
Length = 443
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +2
Query: 23 ILIVNMSTTAKGTFQPDSDVHISYEDQQKINKFARLNAKVDDYKDE 160
IL+V+M D D+HIS +K+ K A+L+ K Y+++
Sbjct: 21 ILMVSMVRCLSSNQPTDDDMHISKRKLKKLFKVAQLSKKSRSYEND 66
>Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical protein
T18D3.4 protein.
Length = 1947
Score = 29.1 bits (62), Expect = 3.1
Identities = 11/39 (28%), Positives = 24/39 (61%)
Frame = +1
Query: 268 CQNLEITLKNLEEAKAKKIHEIHDLEEKCEELKSQMSDL 384
CQ+++++L+ +E K K H+I L+++ + +S L
Sbjct: 970 CQDVDLSLRKVEAEKNAKEHQIRALQDEMRQQDENISKL 1008
>Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical protein
T18D3.4 protein.
Length = 1947
Score = 29.1 bits (62), Expect = 3.1
Identities = 11/39 (28%), Positives = 24/39 (61%)
Frame = +1
Query: 268 CQNLEITLKNLEEAKAKKIHEIHDLEEKCEELKSQMSDL 384
CQ+++++L+ +E K K H+I L+++ + +S L
Sbjct: 970 CQDVDLSLRKVEAEKNAKEHQIRALQDEMRQQDENISKL 1008
>X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy chain 2
protein.
Length = 1947
Score = 29.1 bits (62), Expect = 3.1
Identities = 11/39 (28%), Positives = 24/39 (61%)
Frame = +1
Query: 268 CQNLEITLKNLEEAKAKKIHEIHDLEEKCEELKSQMSDL 384
CQ+++++L+ +E K K H+I L+++ + +S L
Sbjct: 970 CQDVDLSLRKVEAEKNAKEHQIRALQDEMRQQDENISKL 1008
>U23517-8|AAM98041.1| 605|Caenorhabditis elegans A kinase anchor
protein protein1, isoform c protein.
Length = 605
Score = 29.1 bits (62), Expect = 3.1
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Frame = +2
Query: 71 DSDVHISYEDQQKIN---KFARLNAKVDDYKDELKVKQNDVKNLEEAVEELSLADD 229
DS++H+ EDQ+ ++ + N D++ DE + V N EE +E + +D
Sbjct: 413 DSEIHLETEDQETLSPETADSSTNKNSDEFPDEGSQSEASVNN-EEVLENVEHVED 467
>U23517-7|AAM98040.1| 1284|Caenorhabditis elegans A kinase anchor
protein protein1, isoform b protein.
Length = 1284
Score = 29.1 bits (62), Expect = 3.1
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Frame = +2
Query: 71 DSDVHISYEDQQKIN---KFARLNAKVDDYKDELKVKQNDVKNLEEAVEELSLADD 229
DS++H+ EDQ+ ++ + N D++ DE + V N EE +E + +D
Sbjct: 413 DSEIHLETEDQETLSPETADSSTNKNSDEFPDEGSQSEASVNN-EEVLENVEHVED 467
>U23517-6|AAB93340.1| 1280|Caenorhabditis elegans A kinase anchor
protein protein1, isoform a protein.
Length = 1280
Score = 29.1 bits (62), Expect = 3.1
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Frame = +2
Query: 71 DSDVHISYEDQQKIN---KFARLNAKVDDYKDELKVKQNDVKNLEEAVEELSLADD 229
DS++H+ EDQ+ ++ + N D++ DE + V N EE +E + +D
Sbjct: 413 DSEIHLETEDQETLSPETADSSTNKNSDEFPDEGSQSEASVNN-EEVLENVEHVED 467
>AF067608-15|AAO38679.1| 470|Caenorhabditis elegans Hypothetical
protein B0511.14b protein.
Length = 470
Score = 29.1 bits (62), Expect = 3.1
Identities = 10/45 (22%), Positives = 27/45 (60%)
Frame = +2
Query: 110 INKFARLNAKVDDYKDELKVKQNDVKNLEEAVEELSLADDSEKIP 244
I K + + ++D Y ++++ K +++ ++E VEE ++ + +P
Sbjct: 325 IRKKGKTDEQLDHYHEKIREKYRNIQKIQEGVEEEDEDEEDDDMP 369
>AF067608-14|AAK95864.1| 551|Caenorhabditis elegans Hypothetical
protein B0511.14a protein.
Length = 551
Score = 29.1 bits (62), Expect = 3.1
Identities = 10/45 (22%), Positives = 27/45 (60%)
Frame = +2
Query: 110 INKFARLNAKVDDYKDELKVKQNDVKNLEEAVEELSLADDSEKIP 244
I K + + ++D Y ++++ K +++ ++E VEE ++ + +P
Sbjct: 325 IRKKGKTDEQLDHYHEKIREKYRNIQKIQEGVEEEDEDEEDDDMP 369
>AF045926-1|AAC24507.1| 1280|Caenorhabditis elegans A kinase anchor
protein protein.
Length = 1280
Score = 29.1 bits (62), Expect = 3.1
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Frame = +2
Query: 71 DSDVHISYEDQQKIN---KFARLNAKVDDYKDELKVKQNDVKNLEEAVEELSLADD 229
DS++H+ EDQ+ ++ + N D++ DE + V N EE +E + +D
Sbjct: 413 DSEIHLETEDQETLSPETADSSTNKNSDEFPDEGSQSEASVNN-EEVLENVEHVED 467
>Z74475-2|CAA98958.4| 385|Caenorhabditis elegans Hypothetical
protein R04F11.3 protein.
Length = 385
Score = 28.7 bits (61), Expect = 4.1
Identities = 15/50 (30%), Positives = 30/50 (60%)
Frame = +2
Query: 95 EDQQKINKFARLNAKVDDYKDELKVKQNDVKNLEEAVEELSLADDSEKIP 244
+DQ+K N+ R +VD+ ++ +K + K E+ E+L ++ DS++ P
Sbjct: 204 QDQEKKNR-KRPMIEVDESEELIKATKPKEKTPEKKPEKLIISQDSDEFP 252
>AC024810-9|AAF60766.1| 547|Caenorhabditis elegans Hypothetical
protein Y54E10A.12 protein.
Length = 547
Score = 28.7 bits (61), Expect = 4.1
Identities = 11/36 (30%), Positives = 23/36 (63%)
Frame = +2
Query: 101 QQKINKFARLNAKVDDYKDELKVKQNDVKNLEEAVE 208
++ INK L K YK+ELK+K++ ++ ++ ++
Sbjct: 310 RKDINKLKGLQGKQSFYKEELKLKKSALEEIQRKID 345
>U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myosin
protein 1 protein.
Length = 1963
Score = 28.3 bits (60), Expect = 5.4
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +1
Query: 271 QNLEITLKNLEEAKAKKIHEIHDLEEKCEELKSQMSD 381
+NLE L L++A K + E LEEK E L +Q+ D
Sbjct: 980 RNLEERLVELQDAYDKLLKEKRLLEEKVEGLTTQLLD 1016
>Z83123-7|CAB05612.2| 332|Caenorhabditis elegans Hypothetical
protein T04A11.9 protein.
Length = 332
Score = 27.9 bits (59), Expect = 7.2
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -1
Query: 672 NIWFYNLRTISWNLISLYCNFKLH 601
N F + T+ W + L CNFKLH
Sbjct: 207 NAPFEMINTVFWLITYLLCNFKLH 230
>Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical
protein F11C3.3 protein.
Length = 1963
Score = 27.9 bits (59), Expect = 7.2
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 292 KNLEEAKAKKIHEIHDLEEKCEELKSQMSDLKAHL 396
K LEE+ AK + E L E K+Q+SD + L
Sbjct: 880 KELEESSAKLVEEKTSLFTNLESTKTQLSDAEERL 914
>Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical
protein F11C3.3 protein.
Length = 1963
Score = 27.9 bits (59), Expect = 7.2
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 292 KNLEEAKAKKIHEIHDLEEKCEELKSQMSDLKAHL 396
K LEE+ AK + E L E K+Q+SD + L
Sbjct: 880 KELEESSAKLVEEKTSLFTNLESTKTQLSDAEERL 914
>U58746-11|AAB00630.1| 314|Caenorhabditis elegans Hypothetical
protein R05G6.1 protein.
Length = 314
Score = 27.9 bits (59), Expect = 7.2
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 155 DELKVKQNDVKNLEEAVEELSLADDSEKIP 244
DE++VK NDV L+ A+E L + ++ P
Sbjct: 112 DEVRVKMNDVAQLQGAIEHYVLRNSAQFDP 141
>U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock protein
protein 3 protein.
Length = 661
Score = 27.9 bits (59), Expect = 7.2
Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Frame = +2
Query: 29 IVNMSTTAKGTFQPDSDVHISYEDQQKINKFA-RLNAKVDDYKDEL--KVKQNDVKNLEE 199
I M A+ + D V E + ++ +A L +++D K++L K+ ++D K +EE
Sbjct: 543 IERMINDAEKFAEDDKKVKDKAEARNELESYAYNLKNQIED-KEKLGGKLDEDDKKTIEE 601
Query: 200 AVEE 211
AVEE
Sbjct: 602 AVEE 605
>U50309-6|AAG24134.1| 247|Caenorhabditis elegans Hypothetical
protein F58G4.3 protein.
Length = 247
Score = 27.9 bits (59), Expect = 7.2
Identities = 15/57 (26%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +2
Query: 110 INKFARLNAKVDDYKDEL-KVKQNDVKNLEEAVEELSLADDSEKIPYLIVKFLFVRI 277
+ K ++ KV ++L K+ +N K +EE EE+ D +I + ++ F+ +I
Sbjct: 165 LKKVGKIIKKVGAVFEKLTKIIKNTTKTIEEKNEEIQKLKDQNEIEFNVIIFIVSQI 221
>J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy chain
protein.
Length = 1966
Score = 27.9 bits (59), Expect = 7.2
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 292 KNLEEAKAKKIHEIHDLEEKCEELKSQMSDLKAHL 396
K LEE+ AK + E L E K+Q+SD + L
Sbjct: 883 KELEESSAKLVEEKTSLFTNLESTKTQLSDAEERL 917
>AF016669-2|AAB66099.2| 455|Caenorhabditis elegans Hypothetical
protein K10G6.4 protein.
Length = 455
Score = 27.9 bits (59), Expect = 7.2
Identities = 10/31 (32%), Positives = 21/31 (67%)
Frame = +2
Query: 95 EDQQKINKFARLNAKVDDYKDELKVKQNDVK 187
E+ Q + + A ++ K+DDYK + K K+ +++
Sbjct: 126 ENDQLLEEIAEMSTKMDDYKRKEKAKEVEMR 156
>Z69902-10|CAI59119.1| 4053|Caenorhabditis elegans Hypothetical
protein C47D12.1c protein.
Length = 4053
Score = 27.5 bits (58), Expect = 9.5
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +2
Query: 71 DSDVHISYEDQQKINKFARLNAKV 142
DSD HISY D K LN K+
Sbjct: 1522 DSDRHISYNDIMKFKCLVELNPKI 1545
>Z69902-9|CAH10779.1| 4061|Caenorhabditis elegans Hypothetical protein
C47D12.1b protein.
Length = 4061
Score = 27.5 bits (58), Expect = 9.5
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +2
Query: 71 DSDVHISYEDQQKINKFARLNAKV 142
DSD HISY D K LN K+
Sbjct: 1528 DSDRHISYNDIMKFKCLVELNPKI 1551
>Z69902-8|CAA93765.2| 4064|Caenorhabditis elegans Hypothetical protein
C47D12.1a protein.
Length = 4064
Score = 27.5 bits (58), Expect = 9.5
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +2
Query: 71 DSDVHISYEDQQKINKFARLNAKV 142
DSD HISY D K LN K+
Sbjct: 1528 DSDRHISYNDIMKFKCLVELNPKI 1551
>Z37139-11|CAO82010.1| 487|Caenorhabditis elegans Hypothetical
protein F34D10.9 protein.
Length = 487
Score = 27.5 bits (58), Expect = 9.5
Identities = 19/77 (24%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Frame = +2
Query: 26 LIVNMSTTAKGTF-QPDSDVHISYEDQQKINKFARLNAKVDDYKDELKVKQNDVKNLEEA 202
+ +N++ F +PD D+ ++K + RLN +++D+ L + +DV+ +
Sbjct: 171 MTINIAANPLNCFTKPDEDLSSLARYRRKSFRKLRLNFQMEDFNKFLTSRPSDVE-AKSL 229
Query: 203 VEELSLADDSEKIPYLI 253
+ L D EKI L+
Sbjct: 230 ISLFLLHLDEEKISVLL 246
>Z34799-9|CAO82035.1| 487|Caenorhabditis elegans Hypothetical
protein F34D10.9 protein.
Length = 487
Score = 27.5 bits (58), Expect = 9.5
Identities = 19/77 (24%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Frame = +2
Query: 26 LIVNMSTTAKGTF-QPDSDVHISYEDQQKINKFARLNAKVDDYKDELKVKQNDVKNLEEA 202
+ +N++ F +PD D+ ++K + RLN +++D+ L + +DV+ +
Sbjct: 171 MTINIAANPLNCFTKPDEDLSSLARYRRKSFRKLRLNFQMEDFNKFLTSRPSDVE-AKSL 229
Query: 203 VEELSLADDSEKIPYLI 253
+ L D EKI L+
Sbjct: 230 ISLFLLHLDEEKISVLL 246
>AY551966-1|AAS65430.1| 4064|Caenorhabditis elegans TRR-1 protein.
Length = 4064
Score = 27.5 bits (58), Expect = 9.5
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +2
Query: 71 DSDVHISYEDQQKINKFARLNAKV 142
DSD HISY D K LN K+
Sbjct: 1528 DSDRHISYNDIMKFKCLVELNPKI 1551
>AL110485-26|CAB60359.3| 779|Caenorhabditis elegans Hypothetical
protein Y46G5A.17 protein.
Length = 779
Score = 27.5 bits (58), Expect = 9.5
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +2
Query: 131 NAKVDDYKDELKVKQNDVKNLEEAVE 208
N ++++ELK ND+K L EA+E
Sbjct: 748 NTSSREFREELKRSLNDMKKLAEAIE 773
>AF003138-5|AAL77178.1| 488|Caenorhabditis elegans Hypothetical
protein F12B6.2b protein.
Length = 488
Score = 27.5 bits (58), Expect = 9.5
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = +2
Query: 29 IVNMSTTAKGTFQPDSDVHISYEDQQKINKFARLNAKVDDYKDELKVKQNDVKNL 193
+V++ + GTF PD + S ++Q I+ + A + + E K+ KNL
Sbjct: 9 MVDIVRSGNGTFHPDLHMEWSGDEQANIHTSFYIGAFIAVFPSEFLAKKLGPKNL 63
>AF003138-4|ABD94108.1| 400|Caenorhabditis elegans Hypothetical
protein F12B6.2d protein.
Length = 400
Score = 27.5 bits (58), Expect = 9.5
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = +2
Query: 29 IVNMSTTAKGTFQPDSDVHISYEDQQKINKFARLNAKVDDYKDELKVKQNDVKNL 193
+V++ + GTF PD + S ++Q I+ + A + + E K+ KNL
Sbjct: 51 MVDIVRSGNGTFHPDLHMEWSGDEQANIHTSFYIGAFIAVFPSEFLAKKLGPKNL 105
>AF003138-2|AAM15567.1| 546|Caenorhabditis elegans Hypothetical
protein F12B6.2a protein.
Length = 546
Score = 27.5 bits (58), Expect = 9.5
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = +2
Query: 29 IVNMSTTAKGTFQPDSDVHISYEDQQKINKFARLNAKVDDYKDELKVKQNDVKNL 193
+V++ + GTF PD + S ++Q I+ + A + + E K+ KNL
Sbjct: 51 MVDIVRSGNGTFHPDLHMEWSGDEQANIHTSFYIGAFIAVFPSEFLAKKLGPKNL 105
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,306,596
Number of Sequences: 27780
Number of extensions: 216210
Number of successful extensions: 929
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 830
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 929
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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