Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0988
         (672 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein p...    28   0.23 
AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    25   1.6  
CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative calcium/c...    25   2.2  
AF117748-1|AAD38334.1|  365|Anopheles gambiae serine protease 14...    25   2.2  
AY176048-1|AAO19579.1|  521|Anopheles gambiae cytochrome P450 CY...    24   3.8  
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    24   5.0  
AY176050-1|AAO19581.1|  522|Anopheles gambiae cytochrome P450 CY...    24   5.0  
AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin b...    24   5.0  
AY176051-1|AAO19582.1|  522|Anopheles gambiae cytochrome P450 CY...    23   6.6  

>AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein
           protein.
          Length = 468

 Score = 28.3 bits (60), Expect = 0.23
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = -3

Query: 574 LARLFLKLMYGRCSVLESVESPDRAKRCFK 485
           + RL LK++Y  C+V E+  +P    RC++
Sbjct: 379 IIRLRLKVLYTMCAVKEAPHTPIEKLRCYR 408


>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -3

Query: 142 PPDGKWSPSLMEVNNARG 89
           PPD  W P ++  NNA G
Sbjct: 104 PPDKVWKPDIVLFNNADG 121


>CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative
           calcium/calmodulin-dependentprotein kinase, CAKI
           protein.
          Length = 872

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 20/76 (26%), Positives = 30/76 (39%), Gaps = 2/76 (2%)
 Frame = -3

Query: 331 ELIHITWR-RCXVCVSRDPLCCLPTGGLG*APTMFPERHDFLEASTKAKT-YIIFFAFVG 158
           ++IH   R  C +  + D    +  GG G A    P   D +E   +    + +    V 
Sbjct: 115 DIIHRDVRPACALLATADNSAPVKLGGFGSA-VQLPNGRDSVETHGRVGCPHYMAPEVVA 173

Query: 157 RRAYGPPDGKWSPSLM 110
           RR YG P   W   +M
Sbjct: 174 RRVYGKPCDVWGAGVM 189


>AF117748-1|AAD38334.1|  365|Anopheles gambiae serine protease 14A
           protein.
          Length = 365

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +2

Query: 281 ISGNAYXAASPSNMDELCSDSGGVILIKRF 370
           + G    A     +D    DSGG +++KRF
Sbjct: 297 VIGEQLCAGGVFGIDSCSGDSGGPLMVKRF 326


>AY176048-1|AAO19579.1|  521|Anopheles gambiae cytochrome P450
           CYP12F4 protein.
          Length = 521

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = +2

Query: 410 VLFCIESNGRRWEQLSKRDRSLCPVLEAPL 499
           +L+C+  N  + E+L    R + P  ++PL
Sbjct: 335 ILYCLAKNPEKQEKLRAELRKIMPNKDSPL 364


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 1222

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = +3

Query: 57  EYLMVGNGLALP 92
           EY  VGNG+ALP
Sbjct: 171 EYTFVGNGVALP 182


>AY176050-1|AAO19581.1|  522|Anopheles gambiae cytochrome P450
           CYP12F2 protein.
          Length = 522

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 9/30 (30%), Positives = 18/30 (60%)
 Frame = +2

Query: 410 VLFCIESNGRRWEQLSKRDRSLCPVLEAPL 499
           VL+C+  N  +  +L +  R++ P  ++PL
Sbjct: 337 VLYCLAKNPEKQAKLREELRTILPKKDSPL 366


>AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 568

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +2

Query: 68  GRQRFGSAPGIVDFHERR*P 127
           GR R G  PG  + H RR P
Sbjct: 319 GRLRTGPVPGAAERHRRRRP 338


>AY176051-1|AAO19582.1|  522|Anopheles gambiae cytochrome P450
           CYP12F1 protein.
          Length = 522

 Score = 23.4 bits (48), Expect = 6.6
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = +2

Query: 410 VLFCIESNGRRWEQLSKRDRSLCPVLEAPL 499
           +L+C+  N  +   L K  RS+ P  ++PL
Sbjct: 336 ILYCLAKNPSKQAILRKELRSILPHHDSPL 365


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 774,647
Number of Sequences: 2352
Number of extensions: 16974
Number of successful extensions: 76
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 75
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 76
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67322955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)