Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0988
         (672 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058344-1|AAL13573.1|  477|Drosophila melanogaster GH12014p pro...    31   1.9  
AE014298-720|AAF46020.2|  477|Drosophila melanogaster CG4198-PA ...    31   1.9  
AE013599-3283|AAM71018.2| 2968|Drosophila melanogaster CG13492-P...    29   4.4  
AE013599-3282|AAF46766.2| 2931|Drosophila melanogaster CG13492-P...    29   4.4  
BT016155-1|AAV37040.1|  177|Drosophila melanogaster AT13780p pro...    29   5.8  
AE014297-912|AAN13419.2|  411|Drosophila melanogaster CG33936-PD...    29   5.8  
AE014297-911|AAZ52520.1|  469|Drosophila melanogaster CG33936-PC...    29   5.8  
AE013599-3591|AAF46994.1|  425|Drosophila melanogaster CG30414-P...    29   7.6  

>AY058344-1|AAL13573.1|  477|Drosophila melanogaster GH12014p
           protein.
          Length = 477

 Score = 30.7 bits (66), Expect = 1.9
 Identities = 18/53 (33%), Positives = 27/53 (50%)
 Frame = +2

Query: 251 QTAGG*AAKWISGNAYXAASPSNMDELCSDSGGVILIKRFQRVLGTGSLIMQT 409
           + AGG A     G    A+SPSN+D+    +GG +  +R Q+  G  +L   T
Sbjct: 62  KVAGGAAGGASGGGTSTASSPSNVDQSFGLAGGRVTRRRRQQAHGAITLASST 114


>AE014298-720|AAF46020.2|  477|Drosophila melanogaster CG4198-PA
           protein.
          Length = 477

 Score = 30.7 bits (66), Expect = 1.9
 Identities = 18/53 (33%), Positives = 27/53 (50%)
 Frame = +2

Query: 251 QTAGG*AAKWISGNAYXAASPSNMDELCSDSGGVILIKRFQRVLGTGSLIMQT 409
           + AGG A     G    A+SPSN+D+    +GG +  +R Q+  G  +L   T
Sbjct: 62  KVAGGAAGGASGGGTSTASSPSNVDQSFGLAGGRVTRRRRQQAHGAITLASST 114


>AE013599-3283|AAM71018.2| 2968|Drosophila melanogaster CG13492-PB,
            isoform B protein.
          Length = 2968

 Score = 29.5 bits (63), Expect = 4.4
 Identities = 16/43 (37%), Positives = 21/43 (48%)
 Frame = -2

Query: 134  W*VVTVAHGSQQCQGQSQTVAYH*VLSASLV*RRTCRSARETS 6
            W   + +H ++QCQGQ  T  Y     A L   RTC   +E S
Sbjct: 2220 WEPTSASHRTRQCQGQCMTALYG-SADAGLDLIRTCLDDKEAS 2261


>AE013599-3282|AAF46766.2| 2931|Drosophila melanogaster CG13492-PA,
            isoform A protein.
          Length = 2931

 Score = 29.5 bits (63), Expect = 4.4
 Identities = 16/43 (37%), Positives = 21/43 (48%)
 Frame = -2

Query: 134  W*VVTVAHGSQQCQGQSQTVAYH*VLSASLV*RRTCRSARETS 6
            W   + +H ++QCQGQ  T  Y     A L   RTC   +E S
Sbjct: 2183 WEPTSASHRTRQCQGQCMTALYG-SADAGLDLIRTCLDDKEAS 2224


>BT016155-1|AAV37040.1|  177|Drosophila melanogaster AT13780p
           protein.
          Length = 177

 Score = 29.1 bits (62), Expect = 5.8
 Identities = 16/49 (32%), Positives = 23/49 (46%)
 Frame = -2

Query: 368 ISLLVSPHHYRSRAHPYYLETLRCMRFQRSTLLPTHRRSGMSSNDVSRA 222
           ++++ SPH    R  P     +       STLL TH+R G  S  + RA
Sbjct: 3   VTIVASPHKKTGRVVPPKSTPVADKSRSVSTLLSTHKRKGPMSLGIKRA 51


>AE014297-912|AAN13419.2|  411|Drosophila melanogaster CG33936-PD,
           isoform D protein.
          Length = 411

 Score = 29.1 bits (62), Expect = 5.8
 Identities = 16/49 (32%), Positives = 23/49 (46%)
 Frame = -2

Query: 368 ISLLVSPHHYRSRAHPYYLETLRCMRFQRSTLLPTHRRSGMSSNDVSRA 222
           ++++ SPH    R  P     +       STLL TH+R G  S  + RA
Sbjct: 3   VTIVASPHKKTGRVVPPKSTPVADKSRSVSTLLSTHKRKGPMSLGIKRA 51


>AE014297-911|AAZ52520.1|  469|Drosophila melanogaster CG33936-PC,
           isoform C protein.
          Length = 469

 Score = 29.1 bits (62), Expect = 5.8
 Identities = 16/49 (32%), Positives = 23/49 (46%)
 Frame = -2

Query: 368 ISLLVSPHHYRSRAHPYYLETLRCMRFQRSTLLPTHRRSGMSSNDVSRA 222
           ++++ SPH    R  P     +       STLL TH+R G  S  + RA
Sbjct: 3   VTIVASPHKKTGRVVPPKSTPVADKSRSVSTLLSTHKRKGPMSLGIKRA 51


>AE013599-3591|AAF46994.1|  425|Drosophila melanogaster CG30414-PA
           protein.
          Length = 425

 Score = 28.7 bits (61), Expect = 7.6
 Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 5/40 (12%)
 Frame = -1

Query: 144 AHLMVSGHRR----SWKSTMPGAEPNRCLPLS-TLRKPRL 40
           AH +VS H R     +K+  PG + +RC+P S  LR+ RL
Sbjct: 78  AHCIVSTHMRVRLGEYKTRFPGKDCSRCVPKSYKLRRIRL 117


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,942,430
Number of Sequences: 53049
Number of extensions: 785559
Number of successful extensions: 2052
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1938
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2052
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2910007350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)