Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0987
(677 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript... 35 0.003
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript... 34 0.004
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript... 34 0.005
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript... 32 0.014
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript... 32 0.014
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein. 31 0.033
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ... 31 0.044
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript... 29 0.13
M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles ... 28 0.24
AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcript... 28 0.24
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript... 28 0.31
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript... 27 0.72
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript... 26 1.3
Z49813-1|CAA89967.1| 247|Anopheles gambiae serine proteinase pr... 24 3.8
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p... 24 3.8
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript... 24 5.1
AJ438610-4|CAD27476.1| 593|Anopheles gambiae putative transcrip... 23 6.7
CR954256-10|CAJ14151.1| 548|Anopheles gambiae putative alkaline... 23 8.9
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript... 23 8.9
>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
protein.
Length = 1154
Score = 34.7 bits (76), Expect = 0.003
Identities = 14/34 (41%), Positives = 25/34 (73%)
Frame = +1
Query: 145 ITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSV 246
IT+ +P++R +KYLGV L ++++ PH+K+V
Sbjct: 732 ITVGGTEVPFSRTLKYLGVRLHYNLSWVPHVKAV 765
>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
protein.
Length = 1201
Score = 34.3 bits (75), Expect = 0.004
Identities = 11/27 (40%), Positives = 21/27 (77%)
Frame = +1
Query: 166 IPWARKVKYLGVTLDASMTFRPHIKSV 246
+P++R +KYLGV + A +++ PH+K +
Sbjct: 800 VPFSRSIKYLGVRVHAHLSWVPHVKEI 826
>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
protein.
Length = 1099
Score = 33.9 bits (74), Expect = 0.005
Identities = 19/85 (22%), Positives = 42/85 (49%)
Frame = +1
Query: 1 QSAXVALGQWFRKWRIDINPAKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFRQPIPWAR 180
+ A +++ +W + +++ PAK+ V+ +T + + + +R
Sbjct: 679 EEAIISVMEWMARHHLELAPAKTEMVVIS--------STKAPTRIT--VRVGDVDVTSSR 728
Query: 181 KVKYLGVTLDASMTFRPHIKSVRDR 255
++YLGVTL +++ PH+K V +R
Sbjct: 729 SIRYLGVTLQDKLSWLPHVKEVTER 753
>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
protein.
Length = 1168
Score = 32.3 bits (70), Expect = 0.014
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = +1
Query: 142 PITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDR 255
P+ + + R ++YLGV L +++RPH++ V D+
Sbjct: 726 PVNICGVEVRSKRSIRYLGVMLHDHLSWRPHVEMVADK 763
>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 32.3 bits (70), Expect = 0.014
Identities = 18/85 (21%), Positives = 40/85 (47%)
Frame = +1
Query: 1 QSAXVALGQWFRKWRIDINPAKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFRQPIPWAR 180
++A A+ QW ++ +++ PAK+ + I + +P++R
Sbjct: 698 EAAVSAVDQWMQQHHLELAPAKTEMTIISSLKHPPSHIS---------IDVRGTAVPYSR 748
Query: 181 KVKYLGVTLDASMTFRPHIKSVRDR 255
+K+LGV + +++ PH+ +V R
Sbjct: 749 SIKHLGVLVHDHLSWIPHVTAVTQR 773
>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
Length = 1212
Score = 31.1 bits (67), Expect = 0.033
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +1
Query: 175 ARKVKYLGVTLDASMTFRPHIKSVRDRPR 261
+R ++YLGVTL +++ PH++ V R R
Sbjct: 794 SRTMRYLGVTLHDHLSWLPHVREVTTRAR 822
>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 1222
Score = 30.7 bits (66), Expect = 0.044
Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 3/80 (3%)
Frame = +1
Query: 25 QWFRKWRIDINPAKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFRQ---PIPWARKVKYL 195
+W ++ +++ PAK+ AVL TPP FR + +R ++YL
Sbjct: 747 RWMQQHGLELAPAKTEAVLISSKK-------------TPPQVTFRVGDVEVQSSRSIRYL 793
Query: 196 GVTLDASMTFRPHIKSVRDR 255
GV L + +R H+ V ++
Sbjct: 794 GVQLQDHLKWRDHVTKVSEK 813
>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
protein.
Length = 1022
Score = 29.1 bits (62), Expect = 0.13
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +1
Query: 175 ARKVKYLGVTLDASMTFRPHIKSVRDR 255
+R +KYLG+ +D + + HIK V +R
Sbjct: 711 SRHLKYLGIMIDDRLEYTQHIKYVAER 737
>M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles
gambiae T1 retroposon. ).
Length = 975
Score = 28.3 bits (60), Expect = 0.24
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +3
Query: 297 RSKMSLRNKVTLYKTCIRPVMTYASXVFAHAARTHIDTLQSLQSRFCRLA 446
R + LRN LY +RP++ YAS ++ ++S+Q F R+A
Sbjct: 812 RDQSFLRN---LYYALVRPLLEYASIIWNPPTIDGCSRIESIQRLFTRVA 858
>AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcriptase
protein.
Length = 973
Score = 28.3 bits (60), Expect = 0.24
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +1
Query: 178 RKVKYLGVTLDASMTFRPHIK 240
R +KYLGV +D ++FR H++
Sbjct: 703 RHLKYLGVIIDDRLSFRKHVE 723
>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 27.9 bits (59), Expect = 0.31
Identities = 16/80 (20%), Positives = 34/80 (42%)
Frame = +1
Query: 1 QSAXVALGQWFRKWRIDINPAKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFRQPIPWAR 180
+ A A+ W +++ PAK+ V N+ P+ + R
Sbjct: 699 EEAVSAVNLWMENHCLELAPAKTELVTISSKRQG---------NINVPVVINGVERRTTR 749
Query: 181 KVKYLGVTLDASMTFRPHIK 240
++YLGV +D ++++ H++
Sbjct: 750 SIRYLGVVIDNQLSWKSHVE 769
>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
protein.
Length = 1049
Score = 26.6 bits (56), Expect = 0.72
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = +1
Query: 178 RKVKYLGVTLDASMTFRPHIK 240
R +KYLGV +D + F+ H++
Sbjct: 764 RSLKYLGVVIDDRLKFKSHLE 784
>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
protein.
Length = 1009
Score = 25.8 bits (54), Expect = 1.3
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +1
Query: 175 ARKVKYLGVTLDASMTFRPHIKSVRDR 255
+R +KYLG+ LD + + HI+ +R
Sbjct: 706 SRTLKYLGMVLDDRLEYTSHIRYAVER 732
>Z49813-1|CAA89967.1| 247|Anopheles gambiae serine proteinase
protein.
Length = 247
Score = 24.2 bits (50), Expect = 3.8
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +3
Query: 435 CRLAVGAPWFVRNVDLHDDLGLESIG 512
C+ G P VRN D H+ +G+ S G
Sbjct: 188 CQGDSGGPLLVRNGDKHEIVGIVSWG 213
>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
protein.
Length = 1077
Score = 24.2 bits (50), Expect = 3.8
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -1
Query: 236 ICGRNVIDASRVTPRYLTFLAQGMG 162
+CG +D ++VT TFL G G
Sbjct: 805 VCGARAMDIAKVTCTVNTFLWDGSG 829
>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
protein.
Length = 1222
Score = 23.8 bits (49), Expect = 5.1
Identities = 6/21 (28%), Positives = 16/21 (76%)
Frame = +1
Query: 178 RKVKYLGVTLDASMTFRPHIK 240
+ ++YLGV + ++++PH++
Sbjct: 735 QSIRYLGVQIHDHLSWKPHVE 755
>AJ438610-4|CAD27476.1| 593|Anopheles gambiae putative
transcription factor protein.
Length = 593
Score = 23.4 bits (48), Expect = 6.7
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -3
Query: 210 IQGNAQVLDLPGPG 169
+ GN QV + PGPG
Sbjct: 220 LDGNVQVREAPGPG 233
>CR954256-10|CAJ14151.1| 548|Anopheles gambiae putative alkaline
phosphatase protein.
Length = 548
Score = 23.0 bits (47), Expect = 8.9
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +2
Query: 563 DNRLIVAAADYSPNPDHAGASHRR 634
DN LIV AD+S +G S R+
Sbjct: 413 DNTLIVVTADHSHTMTMSGYSSRK 436
>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
protein.
Length = 1248
Score = 23.0 bits (47), Expect = 8.9
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +1
Query: 142 PITLFRQPIPWARKVKYLGVTLDASMTFRPHI 237
PI + I + ++YLGV + +RPH+
Sbjct: 720 PIRVGGLEIRSKQAIRYLGVMIHDHFLWRPHV 751
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 692,852
Number of Sequences: 2352
Number of extensions: 14993
Number of successful extensions: 52
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 52
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68159265
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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