Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0987
(677 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 73 3e-13
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 73 3e-13
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 71 1e-12
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 69 6e-12
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 69 8e-12
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 69 8e-12
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 64 2e-10
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 64 2e-10
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 58 1e-08
X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein ( Dros... 36 0.067
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 34 0.21
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 34 0.21
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 34 0.21
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 34 0.21
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 34 0.21
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 33 0.36
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 33 0.36
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 33 0.36
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 33 0.36
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 33 0.47
AY089390-1|AAL90128.1| 238|Drosophila melanogaster AT21479p pro... 29 7.7
AE014296-2883|AAF49361.1| 238|Drosophila melanogaster CG6485-PA... 29 7.7
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 73.3 bits (172), Expect = 3e-13
Identities = 31/78 (39%), Positives = 53/78 (67%)
Frame = +3
Query: 276 LYPMICKRSKMSLRNKVTLYKTCIRPVMTYASXVFAHAARTHIDTLQSLQSRFCRLAVGA 455
L+ +I RS +SL K LY + ++P+ TY S ++ +A+R++ID +Q QSR R+ GA
Sbjct: 767 LHWLINARSPLSLEFKALLYNSVLKPIWTYGSELWGNASRSNIDIIQRAQSRILRIITGA 826
Query: 456 PWFVRNVDLHDDLGLESI 509
PW++RN ++H DL ++ +
Sbjct: 827 PWYLRNENIHRDLKIKLV 844
Score = 40.3 bits (90), Expect = 0.002
Identities = 26/73 (35%), Positives = 33/73 (45%)
Frame = +1
Query: 25 QWFRKWRIDINPAKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFRQPIPWARKVKYLGVT 204
+W WRI IN K V F PP+ L IP A +V YLGV
Sbjct: 694 RWLADWRISINVQKCKQVTFTLNK-----------QTCPPLVLNNICIPQADEVTYLGVH 742
Query: 205 LDASMTFRPHIKS 243
LD +T+R HI++
Sbjct: 743 LDRRLTWRKHIEA 755
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p protein.
Length = 888
Score = 73.3 bits (172), Expect = 3e-13
Identities = 31/78 (39%), Positives = 53/78 (67%)
Frame = +3
Query: 276 LYPMICKRSKMSLRNKVTLYKTCIRPVMTYASXVFAHAARTHIDTLQSLQSRFCRLAVGA 455
L+ +I RS +SL K LY + ++P+ TY S ++ +A+R++ID +Q QSR R+ GA
Sbjct: 767 LHWLINARSPLSLEFKALLYNSVLKPIWTYGSELWGNASRSNIDIIQRAQSRILRIITGA 826
Query: 456 PWFVRNVDLHDDLGLESI 509
PW++RN ++H DL ++ +
Sbjct: 827 PWYLRNENIHRDLKIKLV 844
Score = 40.3 bits (90), Expect = 0.002
Identities = 26/73 (35%), Positives = 33/73 (45%)
Frame = +1
Query: 25 QWFRKWRIDINPAKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFRQPIPWARKVKYLGVT 204
+W WRI IN K V F PP+ L IP A +V YLGV
Sbjct: 694 RWLADWRISINVQKCKQVTFTLNK-----------QTCPPLVLNNICIPQADEVTYLGVH 742
Query: 205 LDASMTFRPHIKS 243
LD +T+R HI++
Sbjct: 743 LDRRLTWRKHIEA 755
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown protein.
Length = 908
Score = 70.9 bits (166), Expect = 1e-12
Identities = 31/77 (40%), Positives = 47/77 (61%)
Frame = +3
Query: 279 YPMICKRSKMSLRNKVTLYKTCIRPVMTYASXVFAHAARTHIDTLQSLQSRFCRLAVGAP 458
Y ++ RSK+SL NK+T+YK + P Y ++ A +HI +Q++Q++ RL G
Sbjct: 777 YWLLSSRSKLSLSNKLTIYKQILAPNWKYGCQIWGLACDSHIKRIQAIQNKVARLITGCE 836
Query: 459 WFVRNVDLHDDLGLESI 509
WFVRN LH DL L ++
Sbjct: 837 WFVRNTTLHRDLKLATV 853
Score = 50.0 bits (114), Expect = 3e-06
Identities = 27/79 (34%), Positives = 36/79 (45%)
Frame = +1
Query: 25 QWFRKWRIDINPAKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFRQPIPWARKVKYLGVT 204
+W R+W I IN +KS V F PP+ + P+P KYLGV
Sbjct: 703 EWARRWNIGINSSKSNNVCFTLKR-----------RTPPPVYIEEVPVPQPNAAKYLGVL 751
Query: 205 LDASMTFRPHIKSVRDRPR 261
LD +TF H+ +R R R
Sbjct: 752 LDRRLTFSKHVTDIRTRLR 770
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding protein,
3' end. ).
Length = 858
Score = 68.9 bits (161), Expect = 6e-12
Identities = 30/80 (37%), Positives = 52/80 (65%)
Frame = +3
Query: 276 LYPMICKRSKMSLRNKVTLYKTCIRPVMTYASXVFAHAARTHIDTLQSLQSRFCRLAVGA 455
L+ +I S +SL +KV LY + ++P+ TY S ++ +A+ ++ID +Q QS+ R GA
Sbjct: 769 LHWLINSGSPLSLDHKVLLYNSILKPIWTYGSQLWGNASNSNIDIIQRAQSKILRTITGA 828
Query: 456 PWFVRNVDLHDDLGLESIGN 515
PW+VR+ ++ DL + S+ N
Sbjct: 829 PWYVRSENIQRDLNIPSVTN 848
Score = 42.3 bits (95), Expect = 6e-04
Identities = 26/84 (30%), Positives = 40/84 (47%)
Frame = +1
Query: 13 VALGQWFRKWRIDINPAKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFRQPIPWARKVKY 192
+ + +W WRI +N K V F PP+ L P+P A +V Y
Sbjct: 692 IDIKKWLSDWRIKVNEQKCKHVTFTLNRQDC-----------PPLLLNSIPLPKADEVTY 740
Query: 193 LGVTLDASMTFRPHIKSVRDRPRL 264
LGV LD +T+R HI++ + + +L
Sbjct: 741 LGVHLDRRLTWRRHIEAKKTQLKL 764
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 68.5 bits (160), Expect = 8e-12
Identities = 28/82 (34%), Positives = 50/82 (60%)
Frame = +3
Query: 264 ILGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYASXVFAHAARTHIDTLQSLQSRFCRL 443
I+ LYP+I ++SK+S+ NK+ ++KT P++ Y S V+ A+THI LQ Q++ +L
Sbjct: 797 IICTLYPLINRKSKLSISNKIIIFKTIFNPILMYGSPVWGRCAQTHIKKLQICQNKLLKL 856
Query: 444 AVGAPWFVRNVDLHDDLGLESI 509
+ P++ LH G++ +
Sbjct: 857 IMNLPYYTNTKYLHIKAGVQKV 878
Score = 45.2 bits (102), Expect = 8e-05
Identities = 23/81 (28%), Positives = 37/81 (45%)
Frame = +1
Query: 1 QSAXVALGQWFRKWRIDINPAKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFRQPIPWAR 180
QS L +++KW+I INP K+ A+ F + + PI W
Sbjct: 716 QSYLNELDIYYKKWKIKINPNKTNAIFFTKRRKPRYLPDRQ-------LRILDSPIQWVD 768
Query: 181 KVKYLGVTLDASMTFRPHIKS 243
++YLG+ D +TF+ HI +
Sbjct: 769 NIRYLGIIFDKKLTFKYHINN 789
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 68.5 bits (160), Expect = 8e-12
Identities = 28/82 (34%), Positives = 50/82 (60%)
Frame = +3
Query: 264 ILGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYASXVFAHAARTHIDTLQSLQSRFCRL 443
I+ LYP+I ++SK+S+ NK+ ++KT P++ Y S V+ A+THI LQ Q++ +L
Sbjct: 745 IICTLYPLINRKSKLSISNKIIIFKTIFNPILMYGSPVWGRCAQTHIKKLQICQNKLLKL 804
Query: 444 AVGAPWFVRNVDLHDDLGLESI 509
+ P++ LH G++ +
Sbjct: 805 IMNLPYYTNTKYLHIKAGVQKV 826
Score = 45.2 bits (102), Expect = 8e-05
Identities = 23/81 (28%), Positives = 37/81 (45%)
Frame = +1
Query: 1 QSAXVALGQWFRKWRIDINPAKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFRQPIPWAR 180
QS L +++KW+I INP K+ A+ F + + PI W
Sbjct: 664 QSYLNELDIYYKKWKIKINPNKTNAIFFTKRRKPRYLPDRQ-------LRILDSPIQWVD 716
Query: 181 KVKYLGVTLDASMTFRPHIKS 243
++YLG+ D +TF+ HI +
Sbjct: 717 NIRYLGIIFDKKLTFKYHINN 737
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 64.1 bits (149), Expect = 2e-10
Identities = 28/83 (33%), Positives = 52/83 (62%)
Frame = +3
Query: 267 LGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYASXVFAHAARTHIDTLQSLQSRFCRLA 446
+ R+ +I R+K+SL KV +YK+ + P + Y V+ AA++H++ ++ LQ++ R
Sbjct: 778 VARMSWLIAPRNKLSLGCKVNIYKSILAPCLFYGLQVYGIAAKSHLNKIRILQAKTLRRI 837
Query: 447 VGAPWFVRNVDLHDDLGLESIGN 515
GAPW++R D+ DL + +G+
Sbjct: 838 SGAPWYMRTRDIERDLKVPKLGD 860
Score = 35.1 bits (77), Expect = 0.089
Identities = 23/78 (29%), Positives = 33/78 (42%)
Frame = +1
Query: 16 ALGQWFRKWRIDINPAKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFRQPIPWARKVKYL 195
A QW W + IN K V F P ++L + I + KYL
Sbjct: 705 AFQQWAENWNVRINAEKCANVTFANRTGSC-----------PGVSLNGRLIRHHQAYKYL 753
Query: 196 GVTLDASMTFRPHIKSVR 249
G+TLD +TF HI +++
Sbjct: 754 GITLDRKLTFSRHITNIQ 771
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 64.1 bits (149), Expect = 2e-10
Identities = 28/83 (33%), Positives = 52/83 (62%)
Frame = +3
Query: 267 LGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYASXVFAHAARTHIDTLQSLQSRFCRLA 446
+ R+ +I R+K+SL KV +YK+ + P + Y V+ AA++H++ ++ LQ++ R
Sbjct: 580 VARMSWLIAPRNKLSLGCKVNIYKSILAPCLFYGLQVYGIAAKSHLNKIRILQAKTLRRI 639
Query: 447 VGAPWFVRNVDLHDDLGLESIGN 515
GAPW++R D+ DL + +G+
Sbjct: 640 SGAPWYMRTRDIERDLKVPKLGD 662
Score = 35.1 bits (77), Expect = 0.089
Identities = 23/78 (29%), Positives = 33/78 (42%)
Frame = +1
Query: 16 ALGQWFRKWRIDINPAKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFRQPIPWARKVKYL 195
A QW W + IN K V F P ++L + I + KYL
Sbjct: 507 AFQQWAENWNVRINAEKCANVTFANRTGSC-----------PGVSLNGRLIRHHQAYKYL 555
Query: 196 GVTLDASMTFRPHIKSVR 249
G+TLD +TF HI +++
Sbjct: 556 GITLDRKLTFSRHITNIQ 573
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p protein.
Length = 906
Score = 57.6 bits (133), Expect = 1e-08
Identities = 28/90 (31%), Positives = 50/90 (55%)
Frame = +3
Query: 285 MICKRSKMSLRNKVTLYKTCIRPVMTYASXVFAHAARTHIDTLQSLQSRFCRLAVGAPWF 464
++ ++S M+LR K +Y C+ P+ Y ++ AA+++ + +Q LQ+R R P++
Sbjct: 785 LLNRKSTMTLRAKRAVYVHCVAPIWLYGIQIWGIAAKSNYNRIQVLQNRAMRAITDCPYY 844
Query: 465 VRNVDLHDDLGLESIGNT*SQRRNDTSIRL 554
VR LH DL L ++ S+ + S RL
Sbjct: 845 VRGTTLHRDLNLHTVEEQISRHTSRYSDRL 874
Score = 42.3 bits (95), Expect = 6e-04
Identities = 25/85 (29%), Positives = 37/85 (43%)
Frame = +1
Query: 1 QSAXVALGQWFRKWRIDINPAKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFRQPIPWAR 180
Q L W ++W + +NP K+ F +T PI L +
Sbjct: 699 QEYLTTLAAWCKRWILKVNPQKTINPCFTLKTLSP---------VTAPIELEGVILDQPS 749
Query: 181 KVKYLGVTLDASMTFRPHIKSVRDR 255
+ KYLG+TLD +TF PH+K+ R
Sbjct: 750 QAKYLGITLDKRLTFGPHLKATTRR 774
>X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type I retrotransposable
element R1Dm. ).
Length = 1021
Score = 35.5 bits (78), Expect = 0.067
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +1
Query: 139 PPITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDR 255
P + + +P+ R +YLG+T+ M F HI S+R R
Sbjct: 719 PTVRFAGRNLPYVRSCRYLGITVSEGMKFLTHIASLRQR 757
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial
cds. ).
Length = 964
Score = 33.9 bits (74), Expect = 0.21
Identities = 23/73 (31%), Positives = 32/73 (43%)
Frame = +1
Query: 28 WFRKWRIDINPAKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFRQPIPWARKVKYLGVTL 207
W KW I +N AK+ V++ NL + + Q I K YLGV L
Sbjct: 637 WADKWGISVNAAKTGHVIYTLKNDIPT-------NLKT-MKIKGQAIKKESKQSYLGVIL 688
Query: 208 DASMTFRPHIKSV 246
D+ +T PH+ V
Sbjct: 689 DSKLTLSPHVTKV 701
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 33.9 bits (74), Expect = 0.21
Identities = 23/73 (31%), Positives = 32/73 (43%)
Frame = +1
Query: 28 WFRKWRIDINPAKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFRQPIPWARKVKYLGVTL 207
W KW I +N AK+ V++ NL + + Q I K YLGV L
Sbjct: 753 WADKWGISVNAAKTGHVIYTLKNDIPT-------NLKT-MKIKGQAIKKESKQSYLGVIL 804
Query: 208 DASMTFRPHIKSV 246
D+ +T PH+ V
Sbjct: 805 DSKLTLSPHVTKV 817
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 33.9 bits (74), Expect = 0.21
Identities = 23/73 (31%), Positives = 32/73 (43%)
Frame = +1
Query: 28 WFRKWRIDINPAKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFRQPIPWARKVKYLGVTL 207
W KW I +N AK+ V++ NL + + Q I K YLGV L
Sbjct: 753 WADKWGISVNAAKTGHVIYTLKNDIPT-------NLKT-MKIKGQAIKKESKQSYLGVIL 804
Query: 208 DASMTFRPHIKSV 246
D+ +T PH+ V
Sbjct: 805 DSKLTLSPHVTKV 817
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 33.9 bits (74), Expect = 0.21
Identities = 23/73 (31%), Positives = 32/73 (43%)
Frame = +1
Query: 28 WFRKWRIDINPAKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFRQPIPWARKVKYLGVTL 207
W KW I +N AK+ V++ NL + + Q I K YLGV L
Sbjct: 715 WADKWGISVNAAKTGHVIYTLKNDIPT-------NLKT-MKIKGQAIKKESKQSYLGVIL 766
Query: 208 DASMTFRPHIKSV 246
D+ +T PH+ V
Sbjct: 767 DSKLTLSPHVTKV 779
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 33.9 bits (74), Expect = 0.21
Identities = 23/73 (31%), Positives = 32/73 (43%)
Frame = +1
Query: 28 WFRKWRIDINPAKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFRQPIPWARKVKYLGVTL 207
W KW I +N AK+ V++ NL + + Q I K YLGV L
Sbjct: 753 WADKWGISVNAAKTGHVIYTLKNDIPT-------NLKT-MKIKGQAIKKESKQSYLGVIL 804
Query: 208 DASMTFRPHIKSV 246
D+ +T PH+ V
Sbjct: 805 DSKLTLSPHVTKV 817
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 33.1 bits (72), Expect = 0.36
Identities = 22/77 (28%), Positives = 35/77 (45%)
Frame = +1
Query: 25 QWFRKWRIDINPAKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFRQPIPWARKVKYLGVT 204
+W +KW I IN K+ +LF TPP+ + Q K +YLG+
Sbjct: 316 RWSKKWDIAINAKKTGHILFSLKKEQTNI-------YTPPL-INGQRAAKLNKQRYLGLM 367
Query: 205 LDASMTFRPHIKSVRDR 255
LD +TF H+ ++ +
Sbjct: 368 LDRRLTFCAHMTLLKGK 384
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 33.1 bits (72), Expect = 0.36
Identities = 22/77 (28%), Positives = 35/77 (45%)
Frame = +1
Query: 25 QWFRKWRIDINPAKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFRQPIPWARKVKYLGVT 204
+W +KW I IN K+ +LF TPP+ + Q K +YLG+
Sbjct: 763 RWSKKWDIAINAKKTGHILFSLKKEQTNI-------YTPPL-INGQRAAKLNKQRYLGLM 814
Query: 205 LDASMTFRPHIKSVRDR 255
LD +TF H+ ++ +
Sbjct: 815 LDRRLTFCAHMTLLKGK 831
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 33.1 bits (72), Expect = 0.36
Identities = 22/77 (28%), Positives = 35/77 (45%)
Frame = +1
Query: 25 QWFRKWRIDINPAKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFRQPIPWARKVKYLGVT 204
+W +KW I IN K+ +LF TPP+ + Q K +YLG+
Sbjct: 763 RWSKKWDIAINAKKTGHILFSLKKEQTNI-------YTPPL-INGQRAAKLNKQRYLGLM 814
Query: 205 LDASMTFRPHIKSVRDR 255
LD +TF H+ ++ +
Sbjct: 815 LDRRLTFCAHMTLLKGK 831
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 33.1 bits (72), Expect = 0.36
Identities = 22/77 (28%), Positives = 35/77 (45%)
Frame = +1
Query: 25 QWFRKWRIDINPAKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFRQPIPWARKVKYLGVT 204
+W +KW I IN K+ +LF TPP+ + Q K +YLG+
Sbjct: 763 RWSKKWDIAINAKKTGHILFSLKKEQTNI-------YTPPL-INGQRAAKLNKQRYLGLM 814
Query: 205 LDASMTFRPHIKSVRDR 255
LD +TF H+ ++ +
Sbjct: 815 LDRRLTFCAHMTLLKGK 831
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 32.7 bits (71), Expect = 0.47
Identities = 21/70 (30%), Positives = 29/70 (41%)
Frame = +1
Query: 28 WFRKWRIDINPAKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFRQPIPWARKVKYLGVTL 207
W KW I +N AK+ V+F + + Q I K YLGVTL
Sbjct: 765 WADKWGISVNAAKTGHVIFTLKNDLPTNSMN--------VKIKGQTIKKESKQSYLGVTL 816
Query: 208 DASMTFRPHI 237
D+ +T H+
Sbjct: 817 DSKLTLSSHV 826
>AY089390-1|AAL90128.1| 238|Drosophila melanogaster AT21479p
protein.
Length = 238
Score = 28.7 bits (61), Expect = 7.7
Identities = 23/91 (25%), Positives = 40/91 (43%), Gaps = 1/91 (1%)
Frame = +3
Query: 270 GRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYASXVFAHAARTHIDTLQSLQSRFCRLA- 446
G+ +C + LR +++ C + + H T D +L+ +C A
Sbjct: 109 GKYVVSVCTSTPCKLRGGDEIFEACKKTLN------LEHGQTTP-DMQFTLKEDYCMGAC 161
Query: 447 VGAPWFVRNVDLHDDLGLESIGNT*SQRRND 539
V AP N D+++DL +S+ N + RND
Sbjct: 162 VNAPVLAVNDDMYEDLDEKSLANILADLRND 192
>AE014296-2883|AAF49361.1| 238|Drosophila melanogaster CG6485-PA
protein.
Length = 238
Score = 28.7 bits (61), Expect = 7.7
Identities = 23/91 (25%), Positives = 40/91 (43%), Gaps = 1/91 (1%)
Frame = +3
Query: 270 GRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYASXVFAHAARTHIDTLQSLQSRFCRLA- 446
G+ +C + LR +++ C + + H T D +L+ +C A
Sbjct: 109 GKYVVSVCTSTPCKLRGGDEIFEACKKTLN------LEHGQTTP-DMQFTLKEDYCMGAC 161
Query: 447 VGAPWFVRNVDLHDDLGLESIGNT*SQRRND 539
V AP N D+++DL +S+ N + RND
Sbjct: 162 VNAPVLAVNDDMYEDLDEKSLANILADLRND 192
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,311,720
Number of Sequences: 53049
Number of extensions: 648102
Number of successful extensions: 1785
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1639
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1775
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2951284050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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