Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0985
         (453 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ898279-1|ABI58280.1|  839|Homo sapiens transient receptor pote...    29   9.8  
DQ177332-1|ABA06605.1|  837|Homo sapiens transient receptor pote...    29   9.8  
BC132820-1|AAI32821.1|  839|Homo sapiens transient receptor pote...    29   9.8  
BC006334-1|AAH06334.1|  502|Homo sapiens KCNH6 protein protein.        29   9.8  
AY986821-1|AAX84657.1|  779|Homo sapiens vanilloid receptor vari...    29   9.8  
AY131289-1|AAM89472.1|  839|Homo sapiens vanilloid receptor 1 pr...    29   9.8  
AK091877-1|BAC03764.1|  905|Homo sapiens protein ( Homo sapiens ...    29   9.8  
AJ277028-1|CAB95729.1|  839|Homo sapiens vanilloid receptor 1 pr...    29   9.8  
AJ272063-1|CAB89866.2|  839|Homo sapiens vanilloid receptor 1 pr...    29   9.8  
AF311913-1|AAG40871.1|  994|Homo sapiens Eag-related gene member...    29   9.8  
AF196176-1|AAG43467.1|  511|Homo sapiens capsaicin receptor vari...    29   9.8  
AF196175-1|AAG43466.1|  839|Homo sapiens capsaicin receptor prot...    29   9.8  

>DQ898279-1|ABI58280.1|  839|Homo sapiens transient receptor
           potential cation channel subfamily V member 1 transcript
           var protein.
          Length = 839

 Score = 28.7 bits (61), Expect = 9.8
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = -3

Query: 253 KNATVVLLYYILHSSSNLYHQIHQSYTTDHMEG*AGLHI 137
           +N T+ LL  I   + +L   ++ SYT  + +G   LHI
Sbjct: 170 QNTTIPLLLEIARQTDSLKELVNASYTDSYYKGQTALHI 208


>DQ177332-1|ABA06605.1|  837|Homo sapiens transient receptor
           potential vanilloid 1a protein.
          Length = 837

 Score = 28.7 bits (61), Expect = 9.8
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = -3

Query: 253 KNATVVLLYYILHSSSNLYHQIHQSYTTDHMEG*AGLHI 137
           +N T+ LL  I   + +L   ++ SYT  + +G   LHI
Sbjct: 168 QNTTIPLLLEIARQTDSLKELVNASYTDSYYKGQTALHI 206


>BC132820-1|AAI32821.1|  839|Homo sapiens transient receptor
           potential cation channel, subfamily V, member 1 protein.
          Length = 839

 Score = 28.7 bits (61), Expect = 9.8
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = -3

Query: 253 KNATVVLLYYILHSSSNLYHQIHQSYTTDHMEG*AGLHI 137
           +N T+ LL  I   + +L   ++ SYT  + +G   LHI
Sbjct: 170 QNTTIPLLLEIARQTDSLKELVNASYTDSYYKGQTALHI 208


>BC006334-1|AAH06334.1|  502|Homo sapiens KCNH6 protein protein.
          Length = 502

 Score = 28.7 bits (61), Expect = 9.8
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = -2

Query: 389 LSIATTAVPPFKPKRITTSRQKSRRGGCTYPC 294
           L I T    P+    + + + +SRRG C+Y C
Sbjct: 266 LVIYTAVFTPYSAAFLLSDQDESRRGACSYTC 297


>AY986821-1|AAX84657.1|  779|Homo sapiens vanilloid receptor variant
           TRPV1b protein.
          Length = 779

 Score = 28.7 bits (61), Expect = 9.8
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = -3

Query: 253 KNATVVLLYYILHSSSNLYHQIHQSYTTDHMEG*AGLHI 137
           +N T+ LL  I   + +L   ++ SYT  + +G   LHI
Sbjct: 170 QNTTIPLLLEIARQTDSLKELVNASYTDSYYKGQTALHI 208


>AY131289-1|AAM89472.1|  839|Homo sapiens vanilloid receptor 1
           protein.
          Length = 839

 Score = 28.7 bits (61), Expect = 9.8
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = -3

Query: 253 KNATVVLLYYILHSSSNLYHQIHQSYTTDHMEG*AGLHI 137
           +N T+ LL  I   + +L   ++ SYT  + +G   LHI
Sbjct: 170 QNTTIPLLLEIARQTDSLKELVNASYTDSYYKGQTALHI 208


>AK091877-1|BAC03764.1|  905|Homo sapiens protein ( Homo sapiens
           cDNA FLJ34558 fis, clone KIDNE2001636, highly similar to
           Rattus norvegicus potassium channel (erg2) mRNA. ).
          Length = 905

 Score = 28.7 bits (61), Expect = 9.8
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = -2

Query: 389 LSIATTAVPPFKPKRITTSRQKSRRGGCTYPC 294
           L I T    P+    + + + +SRRG C+Y C
Sbjct: 266 LVIYTAVFTPYSAAFLLSDQDESRRGACSYTC 297


>AJ277028-1|CAB95729.1|  839|Homo sapiens vanilloid receptor 1
           protein.
          Length = 839

 Score = 28.7 bits (61), Expect = 9.8
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = -3

Query: 253 KNATVVLLYYILHSSSNLYHQIHQSYTTDHMEG*AGLHI 137
           +N T+ LL  I   + +L   ++ SYT  + +G   LHI
Sbjct: 170 QNTTIPLLLEIARQTDSLKELVNASYTDSYYKGQTALHI 208


>AJ272063-1|CAB89866.2|  839|Homo sapiens vanilloid receptor 1
           protein.
          Length = 839

 Score = 28.7 bits (61), Expect = 9.8
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = -3

Query: 253 KNATVVLLYYILHSSSNLYHQIHQSYTTDHMEG*AGLHI 137
           +N T+ LL  I   + +L   ++ SYT  + +G   LHI
Sbjct: 170 QNTTIPLLLEIARQTDSLKELVNASYTDSYYKGQTALHI 208


>AF311913-1|AAG40871.1|  994|Homo sapiens Eag-related gene member 2
           protein.
          Length = 994

 Score = 28.7 bits (61), Expect = 9.8
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = -2

Query: 389 LSIATTAVPPFKPKRITTSRQKSRRGGCTYPC 294
           L I T    P+    + + + +SRRG C+Y C
Sbjct: 266 LVIYTAVFTPYSAAFLLSDQDESRRGACSYTC 297


>AF196176-1|AAG43467.1|  511|Homo sapiens capsaicin receptor variant
           protein.
          Length = 511

 Score = 28.7 bits (61), Expect = 9.8
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = -3

Query: 253 KNATVVLLYYILHSSSNLYHQIHQSYTTDHMEG*AGLHI 137
           +N T+ LL  I   + +L   ++ SYT  + +G   LHI
Sbjct: 170 QNTTIPLLLEIARQTDSLKELVNASYTDSYYKGQTALHI 208


>AF196175-1|AAG43466.1|  839|Homo sapiens capsaicin receptor
           protein.
          Length = 839

 Score = 28.7 bits (61), Expect = 9.8
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = -3

Query: 253 KNATVVLLYYILHSSSNLYHQIHQSYTTDHMEG*AGLHI 137
           +N T+ LL  I   + +L   ++ SYT  + +G   LHI
Sbjct: 170 QNTTIPLLLEIARQTDSLKELVNASYTDSYYKGQTALHI 208


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,877,323
Number of Sequences: 237096
Number of extensions: 1345646
Number of successful extensions: 5136
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 5054
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5133
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3758237868
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)