Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0984
         (470 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   4.3  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    21   7.6  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    21   7.6  

>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.4 bits (43), Expect = 4.3
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -1

Query: 413 HRIDKFIKNLNA 378
           HR+ K IK LNA
Sbjct: 220 HRLSKLIKQLNA 231


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 20.6 bits (41), Expect = 7.6
 Identities = 11/41 (26%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
 Frame = +2

Query: 227 SILRKFSGRRIVSQLTAAAMVA--PTP*GDAKHHPFSTSLQ 343
           +I  + +GR++  ++      +  PTP GD++  P   SL+
Sbjct: 335 NIRARRTGRKVSPRVNTIKHTSCIPTPNGDSRLPPLEISLK 375


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 20.6 bits (41), Expect = 7.6
 Identities = 11/41 (26%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
 Frame = +2

Query: 227 SILRKFSGRRIVSQLTAAAMVA--PTP*GDAKHHPFSTSLQ 343
           +I  + +GR++  ++      +  PTP GD++  P   SL+
Sbjct: 335 NIRARRTGRKVSPRVNTIKHTSCIPTPNGDSRLPPLEISLK 375


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,781
Number of Sequences: 336
Number of extensions: 1918
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10931752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)