Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0983
         (672 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    27   0.18 
DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory pro...    24   1.3  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    24   1.3  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    24   1.3  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    24   1.3  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    24   1.3  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     22   4.0  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   6.9  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    21   9.2  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 26.6 bits (56), Expect = 0.18
 Identities = 13/60 (21%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
 Frame = +1

Query: 421 FIIALRVLYCR-ILFLLLPMFLVCYH*IFTSL*LIILALRKSMSYVLVKFHYTLDLAQNY 597
           F++ +   YC  I+F +  +FL+C +  F +  +  + L    +++    H    L  +Y
Sbjct: 142 FLLCIYYFYCAFIIFTVHLLFLLCIYHFFCAFIIFTMHLLFCCAFIFFNMHLLFLLCLDY 201



 Score = 21.8 bits (44), Expect = 5.3
 Identities = 9/49 (18%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
 Frame = +1

Query: 433 LRVLYCR--ILFLLLPMFLVCYH*IFTSL*LIILALRKSMSYVLVKFHY 573
           + +L+C   I+F +  +FL+C +  + +L +++       ++++   H+
Sbjct: 264 MHLLFCCAFIIFTMHLLFLLCIYYFYCALIILLCIYYFCRAFIIFPTHF 312



 Score = 21.0 bits (42), Expect = 9.2
 Identities = 11/38 (28%), Positives = 17/38 (44%)
 Frame = +1

Query: 421 FIIALRVLYCRILFLLLPMFLVCYH*IFTSL*LIILAL 534
           F + L +L C   F  + +   C   IFT   L +L +
Sbjct: 248 FTVHLLLLVCIYYFYYMHLLFCCAFIIFTMHLLFLLCI 285


>DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory
           protein 5 protein.
          Length = 144

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 8/18 (44%), Positives = 15/18 (83%)
 Frame = +2

Query: 398 DRIMTTFNLLLHYVSCIV 451
           DRI+ +  LLL+Y++C++
Sbjct: 44  DRILHSKRLLLNYINCLL 61


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +3

Query: 411 QLSIYYCITCPVLSHFVFIITYVLSMLS 494
           QL  Y     P++ H + +ITY L ++S
Sbjct: 158 QLKYYQVTGTPIIFHNLTLITYSLCVIS 185


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = +2

Query: 422 LLLHYVSCIVAFCFYYYLC 478
           LLL YVSC+VA       C
Sbjct: 292 LLLDYVSCVVALIILILQC 310


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = +2

Query: 422 LLLHYVSCIVAFCFYYYLC 478
           LLL YVSC+VA       C
Sbjct: 218 LLLDYVSCVVALIILILQC 236


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +3

Query: 411 QLSIYYCITCPVLSHFVFIITYVLSMLS 494
           QL  Y     P++ H + +ITY L ++S
Sbjct: 158 QLKYYQVTGTPIIFHNLTLITYSLCVIS 185


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 7/27 (25%), Positives = 14/27 (51%)
 Frame = -3

Query: 334 SCFYLRYSVSNCY*IDCF*NKNKKKTL 254
           +C+   Y+  +CY  DC      K+++
Sbjct: 72  ACYDCPYNTQDCYREDCIPGDGNKRSI 98


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +2

Query: 425 LLHYVSCIVAFCFYYYLCS 481
           L+ + + + AFC+ YY  S
Sbjct: 543 LIQFNTIVFAFCYCYYSIS 561


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +3

Query: 462 FIITYVLSMLSLNFHITLAYN 524
           F +  +L+ LS  FH   +YN
Sbjct: 74  FTVQNILTFLSCRFHQGASYN 94


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,236
Number of Sequences: 336
Number of extensions: 2797
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17489640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)