Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0983
         (672 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g21920.1 68414.m02743 MORN (Membrane Occupation and Recogniti...    29   2.1  
At5g55380.1 68418.m06900 membrane bound O-acyl transferase (MBOA...    29   2.8  
At2g07190.1 68415.m00824 hypothetical protein                          27   8.6  

>At1g21920.1 68414.m02743 MORN (Membrane Occupation and Recognition
           Nexus) repeat-containing protein
           /phosphatidylinositol-4-phosphate 5-kinase-related
           similar to phosphatidylinositol-4-phosphate 5-kinase
           AtPIP5K1 [Arabidopsis thaliana] GI:3702691; contains
           Pfam profile PF02493: MORN repeat
          Length = 417

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = +2

Query: 359 LKTFYFSLWFKMADRIMTTFNLLLHYVSCIVAFCF 463
           L +F+F + F   D I+T+ NLLL  +   VA  F
Sbjct: 83  LSSFFFFVVFSQTDEILTSENLLLALIFVAVALFF 117


>At5g55380.1 68418.m06900 membrane bound O-acyl transferase (MBOAT)
           family protein / wax synthase-related  similar to wax
           synthase [gi:5020219] from Simmondsia chinensis
          Length = 341

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 16/45 (35%), Positives = 26/45 (57%)
 Frame = +1

Query: 433 LRVLYCRILFLLLPMFLVCYH*IFTSL*LIILALRKSMSYVLVKF 567
           L +L   ILFL+LP+FL C H  F ++ ++ L+   +   +L  F
Sbjct: 37  LSILPVCILFLVLPLFLSCVH--FCAISVLFLSWLANFKLLLFAF 79


>At2g07190.1 68415.m00824 hypothetical protein
          Length = 452

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 15/38 (39%), Positives = 20/38 (52%)
 Frame = +1

Query: 472 PMFLVCYH*IFTSL*LIILALRKSMSYVLVKFHYTLDL 585
           P  L  Y  +   +   I AL+K+ SYVL  F YTL +
Sbjct: 87  PWGLKAYDNLLNCIMKAIYALKKTKSYVLDGFSYTLQI 124


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,899,955
Number of Sequences: 28952
Number of extensions: 181032
Number of successful extensions: 292
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 289
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 292
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1422784080
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)