Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0982
(688 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q6UV17 Cluster: Endonuclease and reverse transcriptase-... 40 0.057
UniRef50_Q9XXW0 Cluster: Endonuclease and reverse transcriptase-... 39 0.099
UniRef50_A4CIN7 Cluster: Putative patatin-like phospholipase; n=... 38 0.30
UniRef50_Q0VJV2 Cluster: Like moricin; n=3; Manduca sexta|Rep: L... 36 0.93
UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bomb... 36 1.2
UniRef50_Q9N8A1 Cluster: Vir5 protein; n=1; Plasmodium vivax|Rep... 34 3.7
UniRef50_UPI0000DA226A Cluster: PREDICTED: hypothetical protein;... 33 6.5
UniRef50_Q8MTQ1 Cluster: Putative uncharacterized protein; n=1; ... 33 8.6
UniRef50_A2DQ40 Cluster: Putative uncharacterized protein; n=1; ... 33 8.6
>UniRef50_Q6UV17 Cluster: Endonuclease and reverse transcriptase-like
protein; n=25; Arthropoda|Rep: Endonuclease and reverse
transcriptase-like protein - Bombyx mori (Silk moth)
Length = 986
Score = 39.9 bits (89), Expect = 0.057
Identities = 20/31 (64%), Positives = 23/31 (74%)
Frame = -1
Query: 244 VSFLWSGR*QLGCGRQWLGSAPGIAEVHGRR 152
+SF G ++ GRQ LGSAPGIAEVHGRR
Sbjct: 956 MSFFKRGLWRVLSGRQRLGSAPGIAEVHGRR 986
>UniRef50_Q9XXW0 Cluster: Endonuclease and reverse
transcriptase-like protein; n=9; cellular organisms|Rep:
Endonuclease and reverse transcriptase-like protein -
Bombyx mori (Silk moth)
Length = 960
Score = 39.1 bits (87), Expect = 0.099
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = -2
Query: 465 VLTDPSAPITLALDTFSSN 409
VLTDPS PITLALDTFSSN
Sbjct: 919 VLTDPSDPITLALDTFSSN 937
>UniRef50_A4CIN7 Cluster: Putative patatin-like phospholipase; n=2;
Flavobacteriales|Rep: Putative patatin-like
phospholipase - Robiginitalea biformata HTCC2501
Length = 759
Score = 37.5 bits (83), Expect = 0.30
Identities = 17/46 (36%), Positives = 27/46 (58%)
Frame = +1
Query: 148 VTVAHGLQQCQGQSQATACRSQAATYRSIGNLQLKRAASQMKLQPD 285
V V HGL+ + AT Q YR++GN++ KRA + + ++PD
Sbjct: 238 VDVQHGLRDREALLSATEILLQINNYRTVGNMEEKRARTDIYIKPD 283
>UniRef50_Q0VJV2 Cluster: Like moricin; n=3; Manduca sexta|Rep: Like
moricin - Manduca sexta (Tobacco hawkmoth) (Tobacco
hornworm)
Length = 248
Score = 35.9 bits (79), Expect = 0.93
Identities = 16/21 (76%), Positives = 16/21 (76%)
Frame = -2
Query: 156 DGNHSPSGGPCAPLPTRAIKK 94
DGNHSPSG P A LPTRA K
Sbjct: 3 DGNHSPSGRPYASLPTRAKMK 23
>UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bombyx
mori (Silk moth)
Length = 782
Score = 35.5 bits (78), Expect = 1.2
Identities = 15/20 (75%), Positives = 17/20 (85%)
Frame = -3
Query: 329 PLSFSSDLLSGSRFRSGCSF 270
PLSFS DLLSGSRFR+G +
Sbjct: 396 PLSFSPDLLSGSRFRTGAEY 415
>UniRef50_Q9N8A1 Cluster: Vir5 protein; n=1; Plasmodium vivax|Rep:
Vir5 protein - Plasmodium vivax
Length = 461
Score = 33.9 bits (74), Expect = 3.7
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +2
Query: 467 CKELLSTFIIM*SFNRSQNDKQSHS-YSNFSKFCVRLMDLRLHFIAFRAGDKKYISCKNN 643
C++ +S F + NRS ++ Q H Y + F +R L L I+ YI KNN
Sbjct: 56 CRKYVSFFKKIKHNNRSYSNPQDHKKYPEYLNFWIR-HQLELQSISKYDRSVLYIHLKNN 114
Query: 644 YPHF 655
YP F
Sbjct: 115 YPQF 118
>UniRef50_UPI0000DA226A Cluster: PREDICTED: hypothetical protein;
n=1; Rattus norvegicus|Rep: PREDICTED: hypothetical
protein - Rattus norvegicus
Length = 113
Score = 33.1 bits (72), Expect = 6.5
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +3
Query: 153 RRPWTSAMPGAEPSHCLPQPSCYLPLHRKLTT 248
R P ++ PG+ P+HC P PS PL +L +
Sbjct: 21 RDPLSAPFPGSTPAHCTPPPSLRGPLSARLAS 52
>UniRef50_Q8MTQ1 Cluster: Putative uncharacterized protein; n=1;
Bombyx mori|Rep: Putative uncharacterized protein -
Bombyx mori (Silk moth)
Length = 85
Score = 32.7 bits (71), Expect = 8.6
Identities = 13/27 (48%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Frame = +3
Query: 126 TAHLMVSGYRRPWTSAMPGAEPSH-CL 203
T +L+ +R WTS +PGA+P H CL
Sbjct: 37 TIYLVDDNHRHSWTSTIPGAQPDHRCL 63
>UniRef50_A2DQ40 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 804
Score = 32.7 bits (71), Expect = 8.6
Identities = 18/81 (22%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Frame = +2
Query: 404 LVLELKVSNARVIGADGSVRTCKELLSTFIIM*SFNRSQNDKQSHSYSNFSKFCVRLMDL 583
+ L+ K+ +++ + T K+ ++ + S Q + + + + + L+D
Sbjct: 74 ITLQTKILIVKILQNSAIIMTKKQFITQADVAISIISDQFENECKKETPNVGYLITLLDA 133
Query: 584 RLHFIAFRAGD-KKYISCKNN 643
HFI F+ GD K+Y+ NN
Sbjct: 134 FFHFIRFQIGDNKEYVETINN 154
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 642,501,477
Number of Sequences: 1657284
Number of extensions: 11605128
Number of successful extensions: 26431
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 25714
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26424
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 53719013270
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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