Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0982
         (688 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    27   0.14 
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    23   3.1  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       22   4.1  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    22   5.4  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    22   5.4  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   9.5  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   9.5  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   9.5  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   9.5  

>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 27.1 bits (57), Expect = 0.14
 Identities = 16/61 (26%), Positives = 27/61 (44%)
 Frame = +3

Query: 153 RRPWTSAMPGAEPSHCLPQPSCYLPLHRKLTTQESCFANETTTGSESRPAEKIRRETQRA 332
           R P T +  G++P    P+P  ++P     TTQ +     T + +E+ PA  +       
Sbjct: 414 RPPSTPSADGSKPVQTTPKPGQWVPEKSTSTTQRT----TTVSTTEAPPAPAVSNPQNEV 469

Query: 333 D 335
           D
Sbjct: 470 D 470


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +1

Query: 205 RSQAATYRSIGNLQLKRAASQMKLQPDRNRD 297
           R Q   Y+   N+ +KR A Q + Q  ++RD
Sbjct: 137 RCQYCRYQKCLNMGMKREAVQEERQRTKDRD 167


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = +3

Query: 123 HTAHLMVSGYRRPWTSAMPGAEPSHCLPQPSCYLPLHR 236
           +T H+   G+  P+T  M G E   C  + S +L + R
Sbjct: 486 YTIHMGYHGFHNPFTCNMCGVE---CSDKVSFFLHIAR 520


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 8/45 (17%)
 Frame = -3

Query: 254 LLSCKFPMER*VAAWLRQAVAWL--------CPWHC*SPWATVTT 144
           LLSC FP ++ V   +  A+A L        CP    +P A +TT
Sbjct: 27  LLSCSFPKKKLVYCIIFGAIATLTCIEGLRDCPRKYSTPLAKITT 71


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 8/45 (17%)
 Frame = -3

Query: 254 LLSCKFPMER*VAAWLRQAVAWL--------CPWHC*SPWATVTT 144
           LLSC FP ++ V   +  A+A L        CP    +P A +TT
Sbjct: 23  LLSCSFPKKKLVYCIIFGAIATLTCIEGLRDCPRKYSTPLAKITT 67


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +3

Query: 225 PLHRKLTTQESCFANET 275
           P+H KLT +ES   ++T
Sbjct: 81  PVHIKLTNRESSIIDKT 97


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +3

Query: 204 PQPSCYLPLHRKLTTQESC 260
           P+P+C  P+HR     ++C
Sbjct: 90  PEPTCDEPVHRPGRCCKTC 108


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = -1

Query: 508  KRLHYYER**QFLTSPYGSISSNNPCI 428
            K + Y +   Q   +  GS SSNNP I
Sbjct: 1385 KPIFYLDEAFQRRVTQIGSTSSNNPSI 1411


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = -1

Query: 508  KRLHYYER**QFLTSPYGSISSNNPCI 428
            K + Y +   Q   +  GS SSNNP I
Sbjct: 1385 KPIFYLDEAFQRRVTQIGSTSSNNPSI 1411


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,728
Number of Sequences: 336
Number of extensions: 3050
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)