Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0981
         (685 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7RG50 Cluster: Putative uncharacterized protein PY0449...    33   6.5  
UniRef50_Q8I293 Cluster: Putative uncharacterized protein PFA023...    33   8.6  

>UniRef50_Q7RG50 Cluster: Putative uncharacterized protein PY04499;
           n=1; Plasmodium yoelii yoelii|Rep: Putative
           uncharacterized protein PY04499 - Plasmodium yoelii
           yoelii
          Length = 1784

 Score = 33.1 bits (72), Expect = 6.5
 Identities = 17/45 (37%), Positives = 26/45 (57%)
 Frame = -2

Query: 408 SYINKPVKYYHNSENTKINKQKCSTHHQSFIRSCSNITSLNYSSH 274
           +Y+NKP KYY N +N  I+K + + ++  FI S +N     Y  H
Sbjct: 370 TYLNKPEKYY-NHQNGLIHKNRPNGYNSQFINS-NNENETCYKKH 412


>UniRef50_Q8I293 Cluster: Putative uncharacterized protein PFA0235w;
           n=2; Plasmodium|Rep: Putative uncharacterized protein
           PFA0235w - Plasmodium falciparum (isolate 3D7)
          Length = 1389

 Score = 32.7 bits (71), Expect = 8.6
 Identities = 14/28 (50%), Positives = 16/28 (57%)
 Frame = -2

Query: 399 NKPVKYYHNSENTKINKQKCSTHHQSFI 316
           NK   Y+H+  N K NK K   HH SFI
Sbjct: 805 NKQHMYHHDMFNVKYNKTKDKEHHSSFI 832


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 563,683,979
Number of Sequences: 1657284
Number of extensions: 9790433
Number of successful extensions: 23779
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 22815
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23767
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 53305790091
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)