Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0981
         (685 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    27   0.11 
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    25   0.76 
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    23   3.1  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      23   3.1  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      23   3.1  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    22   4.1  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    22   4.1  

>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 27.5 bits (58), Expect = 0.11
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = -2

Query: 144 HVDIYPAIHKCIMITT*TRRSLQHTQRRRYHGNA*CSAQTRPNP 13
           H  IYPA+   + ++T TR +L++ +   Y      SA   P P
Sbjct: 239 HQPIYPAVTATVQLSTCTRTTLKNNRASPYPMQRPKSASLSPPP 282


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 24.6 bits (51), Expect = 0.76
 Identities = 16/36 (44%), Positives = 19/36 (52%)
 Frame = -1

Query: 670 KKYLTSLLNGHSKLLSINKIINNY*ALILFFINCKY 563
           KKY +  L  + KLL   KI  N   L+LF IN  Y
Sbjct: 77  KKYWSEFL-ANLKLLKGRKIRKNLYYLLLFVINVLY 111


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 11/23 (47%), Positives = 11/23 (47%)
 Frame = +3

Query: 501 QSLWPISIKSEDYLRLGCLQEYL 569
           QSL P       YLR GCL   L
Sbjct: 256 QSLLPSQTGLSPYLRFGCLSTRL 278


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +1

Query: 76  LXASSRLCCYH 108
           L A SR CCYH
Sbjct: 608 LAARSRRCCYH 618


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +1

Query: 76  LXASSRLCCYH 108
           L A SR CCYH
Sbjct: 500 LAARSRRCCYH 510


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +2

Query: 416 GIPASTLACDALSTFLDNVYF 478
           G P S   C+    F+D +YF
Sbjct: 309 GDPLSGCLCELYMAFMDRLYF 329


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +3

Query: 384 ILQVCLCSSNTVSLHQRLLATLFQHS 461
           ++ VCLC ++  S   ++L  LF  S
Sbjct: 208 LISVCLCGASVHSESSKVLPLLFSVS 233


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,411
Number of Sequences: 336
Number of extensions: 2801
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)