Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0976
         (674 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X96395-1|CAA65259.2| 1545|Homo sapiens canalicular multidrug res...    33   0.93 
U63970-1|AAB39892.1| 1545|Homo sapiens canalicular multispecific...    33   0.93 
U49248-1|AAB09422.1| 1545|Homo sapiens canalicular multispecific...    33   0.93 
AL392107-3|CAI11010.1| 1545|Homo sapiens ATP-binding cassette, s...    33   0.93 
AL133353-7|CAI14502.1| 1545|Homo sapiens ATP-binding cassette, s...    33   0.93 
AJ132244-1|CAB45309.1| 1545|Homo sapiens multidrug resistance pr...    33   0.93 
BC030704-1|AAH30704.1|  712|Homo sapiens ubiquitin specific pept...    30   8.6  

>X96395-1|CAA65259.2| 1545|Homo sapiens canalicular multidrug
           resistance protein protein.
          Length = 1545

 Score = 33.1 bits (72), Expect = 0.93
 Identities = 16/47 (34%), Positives = 25/47 (53%)
 Frame = -1

Query: 482 VGLSKLPYVWPSIHSLWLQLLQLACYVYHHWVMI*PNVCTGVGLRLL 342
           V   KL  V   +H LW  +LQ+   ++  W  + P+V  GVG+ +L
Sbjct: 426 VDAQKLMDVTNFMHMLWSSVLQIVLSIFFLWRELGPSVLAGVGVMVL 472


>U63970-1|AAB39892.1| 1545|Homo sapiens canalicular multispecific
           organic anion transporter protein.
          Length = 1545

 Score = 33.1 bits (72), Expect = 0.93
 Identities = 16/47 (34%), Positives = 25/47 (53%)
 Frame = -1

Query: 482 VGLSKLPYVWPSIHSLWLQLLQLACYVYHHWVMI*PNVCTGVGLRLL 342
           V   KL  V   +H LW  +LQ+   ++  W  + P+V  GVG+ +L
Sbjct: 426 VDAQKLMDVTNFMHMLWSSVLQIVLSIFFLWRELGPSVLAGVGVMVL 472


>U49248-1|AAB09422.1| 1545|Homo sapiens canalicular multispecific
           organic anion transporter protein.
          Length = 1545

 Score = 33.1 bits (72), Expect = 0.93
 Identities = 16/47 (34%), Positives = 25/47 (53%)
 Frame = -1

Query: 482 VGLSKLPYVWPSIHSLWLQLLQLACYVYHHWVMI*PNVCTGVGLRLL 342
           V   KL  V   +H LW  +LQ+   ++  W  + P+V  GVG+ +L
Sbjct: 426 VDAQKLMDVTNFMHMLWSSVLQIVLSIFFLWRELGPSVLAGVGVMVL 472


>AL392107-3|CAI11010.1| 1545|Homo sapiens ATP-binding cassette,
           sub-family C (CFTR/MRP), member 2 protein.
          Length = 1545

 Score = 33.1 bits (72), Expect = 0.93
 Identities = 16/47 (34%), Positives = 25/47 (53%)
 Frame = -1

Query: 482 VGLSKLPYVWPSIHSLWLQLLQLACYVYHHWVMI*PNVCTGVGLRLL 342
           V   KL  V   +H LW  +LQ+   ++  W  + P+V  GVG+ +L
Sbjct: 426 VDAQKLMDVTNFMHMLWSSVLQIVLSIFFLWRELGPSVLAGVGVMVL 472


>AL133353-7|CAI14502.1| 1545|Homo sapiens ATP-binding cassette,
           sub-family C (CFTR/MRP), member 2 protein.
          Length = 1545

 Score = 33.1 bits (72), Expect = 0.93
 Identities = 16/47 (34%), Positives = 25/47 (53%)
 Frame = -1

Query: 482 VGLSKLPYVWPSIHSLWLQLLQLACYVYHHWVMI*PNVCTGVGLRLL 342
           V   KL  V   +H LW  +LQ+   ++  W  + P+V  GVG+ +L
Sbjct: 426 VDAQKLMDVTNFMHMLWSSVLQIVLSIFFLWRELGPSVLAGVGVMVL 472


>AJ132244-1|CAB45309.1| 1545|Homo sapiens multidrug resistance
           protein 2 (MRP2) protein.
          Length = 1545

 Score = 33.1 bits (72), Expect = 0.93
 Identities = 16/47 (34%), Positives = 25/47 (53%)
 Frame = -1

Query: 482 VGLSKLPYVWPSIHSLWLQLLQLACYVYHHWVMI*PNVCTGVGLRLL 342
           V   KL  V   +H LW  +LQ+   ++  W  + P+V  GVG+ +L
Sbjct: 426 VDAQKLMDVTNFMHMLWSSVLQIVLSIFFLWRELGPSVLAGVGVMVL 472


>BC030704-1|AAH30704.1|  712|Homo sapiens ubiquitin specific
           peptidase 44 protein.
          Length = 712

 Score = 29.9 bits (64), Expect = 8.6
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = +1

Query: 55  STKNHELVIVMGDMNAKVGSTITPGVTGAYGLGN 156
           ST  +E+   + D + K    +TPGVTG   LGN
Sbjct: 247 STSENEISQKVSDSSVKRRPIVTPGVTGLRNLGN 280


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,815,576
Number of Sequences: 237096
Number of extensions: 2503813
Number of successful extensions: 4675
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4444
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4675
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7615267504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)