Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0974
         (704 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    25   0.60 
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    25   0.60 
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    24   1.0  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   7.4  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    21   7.4  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    21   9.8  

>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 25.0 bits (52), Expect = 0.60
 Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
 Frame = +1

Query: 40  SPLFGLKEIIQNKSTEGMPFPIILSGTVVTFMWLLYGIILRNKFL-VVQNVVALVLCASQ 216
           +PLF  +    N   + + F + LSG    F+ L+   + +  F   V NV AL    ++
Sbjct: 65  NPLFDGQLYSFNTFAKLLIFVVSLSGNSAVFIMLIISFMHKKSFKNFVNNVAALDETLAK 124

Query: 217 LSLFVIY 237
           L  ++ Y
Sbjct: 125 LGQYINY 131


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 25.0 bits (52), Expect = 0.60
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = -2

Query: 295 IYSVFLAFTFDLSFLLAWM 239
           +Y +F+ F+F ++F  AW+
Sbjct: 32  LYKIFVVFSFAVTFFSAWI 50


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -1

Query: 350 LSCQPLTPYVP 318
           L+CQP  PYVP
Sbjct: 244 LTCQPAVPYVP 254


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = -1

Query: 458 TQRIGNGYNICICPSCSHASNV 393
           +QR   G   C CP+C  A  +
Sbjct: 281 SQRRYTGRATCDCPNCQEAERL 302


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +1

Query: 424 IQILYPLPIRCVSYYCHQQY 483
           I +LY L +    YY  QQY
Sbjct: 107 INVLYVLTLCYAVYYWRQQY 126


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +3

Query: 414 GRTYTNIISIAD 449
           GRTY NI SI++
Sbjct: 30  GRTYNNISSISE 41


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,969
Number of Sequences: 336
Number of extensions: 3691
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18634795
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)