Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0974
         (704 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ278310-1|CAB93496.1|  219|Anopheles gambiae serine protease-li...    27   0.76 
AJ439060-2|CAD27753.1|  135|Anopheles gambiae putative cytoskele...    26   1.0  
AJ438610-10|CAD27482.1|  135|Anopheles gambiae putative cytoskel...    26   1.0  
AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    24   5.4  
AJ001042-1|CAA04496.1|  395|Anopheles gambiae putative gram nega...    24   5.4  
AF081533-1|AAD29854.1|  395|Anopheles gambiae putative gram nega...    24   5.4  

>AJ278310-1|CAB93496.1|  219|Anopheles gambiae serine protease-like
           protein protein.
          Length = 219

 Score = 26.6 bits (56), Expect = 0.76
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = +1

Query: 355 KVHQSLCSARSYRTFDACEQDGHIQILYPLPIRCVSYY 468
           K+H S   A   +  D C+ DG   ++ P+P     YY
Sbjct: 135 KLHSSFICAGGEKGRDTCKGDGGSPLICPIPGSVNHYY 172


>AJ439060-2|CAD27753.1|  135|Anopheles gambiae putative cytoskeletal
           regulator protein.
          Length = 135

 Score = 26.2 bits (55), Expect = 1.0
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -1

Query: 443 NGYNICICPSCSHASN 396
           N YN+  CPS +HA N
Sbjct: 114 NSYNLTTCPSWAHAPN 129


>AJ438610-10|CAD27482.1|  135|Anopheles gambiae putative
           cytoskeletal regulator protein.
          Length = 135

 Score = 26.2 bits (55), Expect = 1.0
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -1

Query: 443 NGYNICICPSCSHASN 396
           N YN+  CPS +HA N
Sbjct: 114 NSYNLTTCPSWAHAPN 129


>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adhesion
            protein protein.
          Length = 1881

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = -1

Query: 197  KATTFCTTKNLFLNIIPYSSHMNVTTVPDSIIGNGMP 87
            KAT  CT  NL L+   +S ++   TV  + I +  P
Sbjct: 1471 KATEECTNANLSLDTTSHSGNLLKATVYINDINDNSP 1507


>AJ001042-1|CAA04496.1|  395|Anopheles gambiae putative gram
           negative bacteria bindingprotein protein.
          Length = 395

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 10/43 (23%), Positives = 23/43 (53%)
 Frame = -2

Query: 628 NNNIGCXLNWKSGWARDLPPLRLSASA*EPYNLILTFIKIWCI 500
           NN+     ++ +G A+ LP   L     +  +L++ ++K+W +
Sbjct: 353 NNSPQAATDFWNGRAQWLPTWNLERDGGKSASLLVDYVKVWAL 395


>AF081533-1|AAD29854.1|  395|Anopheles gambiae putative gram
           negative bacteria bindingprotein protein.
          Length = 395

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 10/43 (23%), Positives = 23/43 (53%)
 Frame = -2

Query: 628 NNNIGCXLNWKSGWARDLPPLRLSASA*EPYNLILTFIKIWCI 500
           NN+     ++ +G A+ LP   L     +  +L++ ++K+W +
Sbjct: 353 NNSPQAATDFWNGRAQWLPTWNLERDGGKSASLLVDYVKVWAL 395


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 725,834
Number of Sequences: 2352
Number of extensions: 15391
Number of successful extensions: 25
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71922660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)