Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0974
(704 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g39060.1 68415.m04801 nodulin MtN3 family protein similar to ... 62 3e-10
At5g23660.1 68418.m02774 nodulin MtN3 family protein similar to ... 62 3e-10
At3g48740.1 68416.m05322 nodulin MtN3 family protein similar to ... 58 4e-09
At4g25010.1 68417.m03588 nodulin MtN3 family protein similar to ... 54 1e-07
At5g13170.1 68418.m01508 nodulin MtN3 family protein similar to ... 53 2e-07
At5g50790.1 68418.m06292 nodulin MtN3 family protein similar to ... 52 3e-07
At5g50800.1 68418.m06293 nodulin MtN3 family protein similar to ... 52 5e-07
At3g14770.1 68416.m01867 nodulin MtN3 family protein similar to ... 50 2e-06
At1g21460.1 68414.m02683 nodulin MtN3 family protein contains si... 50 2e-06
At5g53190.1 68418.m06612 nodulin MtN3 family protein similar to ... 49 3e-06
At1g66770.1 68414.m07590 nodulin MtN3 family protein contains Pf... 47 1e-05
At4g10850.1 68417.m01767 nodulin MtN3 family protein similar to ... 46 3e-05
At3g28007.1 68416.m03496 nodulin MtN3 family protein contains Pf... 44 1e-04
At4g15920.1 68417.m02418 nodulin MtN3 family protein similar to ... 42 3e-04
At3g16690.1 68416.m02132 nodulin MtN3 family protein contains Pf... 40 0.002
At2g45030.1 68415.m05606 mitochondrial elongation factor, putati... 29 3.0
At1g45332.1 68414.m05195 mitochondrial elongation factor, putati... 29 3.0
At5g17680.1 68418.m02072 disease resistance protein (TIR-NBS-LRR... 28 5.2
At3g45600.1 68416.m04925 senescence-associated family protein si... 27 9.2
>At2g39060.1 68415.m04801 nodulin MtN3 family protein similar to
MtN3 GI:1619602 (root nodule development) from [Medicago
truncatula]
Length = 258
Score = 62.5 bits (145), Expect = 3e-10
Identities = 25/74 (33%), Positives = 49/74 (66%)
Frame = +1
Query: 16 AFMFYLIASPLFGLKEIIQNKSTEGMPFPIILSGTVVTFMWLLYGIILRNKFLVVQNVVA 195
A+ + ASPL ++++I+ KS E MPF + LS T+ MW YG+++++KF+ + N++
Sbjct: 139 AYSLAVFASPLSVMRKVIKTKSVEYMPFLLSLSLTLNAVMWFFYGLLIKDKFIAMPNILG 198
Query: 196 LVLCASQLSLFVIY 237
+ +Q+ L+++Y
Sbjct: 199 FLFGVAQMILYMMY 212
Score = 27.5 bits (58), Expect = 9.2
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Frame = +1
Query: 25 FYLIASPLFGLKEIIQNKSTEGMP-FPIILSGTVVTFMWLLYGIILRNKFLVVQ-NVVAL 198
F + SP+ I + KS++G P I + T + L YGI+ + +L++ N
Sbjct: 21 FGVFLSPVPTFYGIYKKKSSKGFQSIPYICALASATLL-LYYGIMKTHAYLIISINTFGC 79
Query: 199 VLCASQLSLFVIY 237
+ S L L+++Y
Sbjct: 80 FIEISYLFLYILY 92
>At5g23660.1 68418.m02774 nodulin MtN3 family protein similar to
MtN3 GI:1619602 (root nodule development) from [Medicago
truncatula]
Length = 285
Score = 62.1 bits (144), Expect = 3e-10
Identities = 28/73 (38%), Positives = 47/73 (64%)
Frame = +1
Query: 19 FMFYLIASPLFGLKEIIQNKSTEGMPFPIILSGTVVTFMWLLYGIILRNKFLVVQNVVAL 198
F + A+PL ++ +I+ KS E MPF + L+ T+ +WLLYG+ L++ ++ NV+
Sbjct: 142 FSVCVFAAPLSIIRTVIKTKSVEYMPFSLSLTLTISAVIWLLYGLALKDIYVAFPNVIGF 201
Query: 199 VLCASQLSLFVIY 237
VL A Q+ L+V+Y
Sbjct: 202 VLGALQMILYVVY 214
Score = 27.9 bits (59), Expect = 6.9
Identities = 19/74 (25%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Frame = +1
Query: 25 FYLIASPLFGLKEIIQNKSTEGMPFPIILSGTVVTFMWLLYGIILRNKFLVVQ-NVVALV 201
F + SP+ I + K+TEG + +WL Y ++ FL+V N
Sbjct: 23 FAVFLSPVPTFYRICKKKTTEGFQSIPYVVALFSAMLWLYYATQKKDVFLLVTINSFGCF 82
Query: 202 LCASQLSLFVIYPS 243
+ +S+FV + S
Sbjct: 83 IETIYISIFVAFAS 96
>At3g48740.1 68416.m05322 nodulin MtN3 family protein similar to
MtN3 GI:1619602 (root nodule development) from [Medicago
truncatula]
Length = 289
Score = 58.4 bits (135), Expect = 4e-09
Identities = 26/73 (35%), Positives = 46/73 (63%)
Frame = +1
Query: 19 FMFYLIASPLFGLKEIIQNKSTEGMPFPIILSGTVVTFMWLLYGIILRNKFLVVQNVVAL 198
F + A+PL ++ +I+ +S E MPF + L+ T+ +WLLYG+ L++ ++ NV+
Sbjct: 142 FSVCVFAAPLSIIRTVIKTRSVEYMPFSLSLTLTISAVIWLLYGLALKDIYVAFPNVLGF 201
Query: 199 VLCASQLSLFVIY 237
L A Q+ L+V+Y
Sbjct: 202 ALGALQMILYVVY 214
>At4g25010.1 68417.m03588 nodulin MtN3 family protein similar to
MtN3 GI:1619602 (root nodule development) from [Medicago
truncatula]
Length = 281
Score = 53.6 bits (123), Expect = 1e-07
Identities = 24/73 (32%), Positives = 44/73 (60%)
Frame = +1
Query: 19 FMFYLIASPLFGLKEIIQNKSTEGMPFPIILSGTVVTFMWLLYGIILRNKFLVVQNVVAL 198
F + A+PL ++ +I+ KS E MPF + L T+ WL YG+ +++ ++ + N++
Sbjct: 141 FSVCVFAAPLSIMRVVIRTKSVEFMPFSLSLFLTISAITWLFYGLAIKDFYVALPNILGA 200
Query: 199 VLCASQLSLFVIY 237
L A Q+ L+VI+
Sbjct: 201 FLGAVQMILYVIF 213
>At5g13170.1 68418.m01508 nodulin MtN3 family protein similar to
MtN3 GI:1619602 (root nodule development) from [Medicago
truncatula]; identical to cDNA senescence-associated
protein (SAG29) mRNA, partial cds GI:4426938
Length = 292
Score = 52.8 bits (121), Expect = 2e-07
Identities = 24/69 (34%), Positives = 39/69 (56%)
Frame = +1
Query: 31 LIASPLFGLKEIIQNKSTEGMPFPIILSGTVVTFMWLLYGIILRNKFLVVQNVVALVLCA 210
+ A+PL + +I+ KS E MPF + T+ MW YG+ L + + + NVV VL
Sbjct: 147 VFAAPLMIVARVIKTKSVEYMPFTLSFFLTISAVMWFAYGLFLNDICIAIPNVVGFVLGL 206
Query: 211 SQLSLFVIY 237
Q+ L+++Y
Sbjct: 207 LQMVLYLVY 215
>At5g50790.1 68418.m06292 nodulin MtN3 family protein similar to
MtN3 GI:1619602 (root nodule development) from [Medicago
truncatula]
Length = 289
Score = 52.4 bits (120), Expect = 3e-07
Identities = 23/73 (31%), Positives = 42/73 (57%)
Frame = +1
Query: 19 FMFYLIASPLFGLKEIIQNKSTEGMPFPIILSGTVVTFMWLLYGIILRNKFLVVQNVVAL 198
F + +PL ++++I+ KS E MPF + T+ MW YG++L++ + + NV+
Sbjct: 140 FALSVFVAPLGIIRKVIKTKSAEFMPFGLSFFLTLSAVMWFFYGLLLKDMNIALPNVLGF 199
Query: 199 VLCASQLSLFVIY 237
+ Q+ LF+IY
Sbjct: 200 IFGVLQMILFLIY 212
>At5g50800.1 68418.m06293 nodulin MtN3 family protein similar to
MtN3 GI:1619602 (root nodule development) from [Medicago
truncatula]
Length = 294
Score = 51.6 bits (118), Expect = 5e-07
Identities = 22/73 (30%), Positives = 44/73 (60%)
Frame = +1
Query: 19 FMFYLIASPLFGLKEIIQNKSTEGMPFPIILSGTVVTFMWLLYGIILRNKFLVVQNVVAL 198
F + A+PL ++ +++ +S E MPF + L T+ WL YG+ +++ ++ + NV+
Sbjct: 141 FSVSVFAAPLSIMRVVVRTRSVEFMPFSLSLFLTISAVTWLFYGLAIKDFYVALPNVLGA 200
Query: 199 VLCASQLSLFVIY 237
L A Q+ L++I+
Sbjct: 201 FLGAVQMILYIIF 213
>At3g14770.1 68416.m01867 nodulin MtN3 family protein similar to
MtN3 GI:1619602 (root nodule development) from [Medicago
truncatula]
Length = 236
Score = 50.0 bits (114), Expect = 2e-06
Identities = 25/69 (36%), Positives = 41/69 (59%)
Frame = +1
Query: 31 LIASPLFGLKEIIQNKSTEGMPFPIILSGTVVTFMWLLYGIILRNKFLVVQNVVALVLCA 210
+ ASPLF + +I+ KS E MPF + LS +++ +LLYG+ + F+ N + +L
Sbjct: 150 MFASPLFVINLVIRTKSVEFMPFYLSLSTFLMSASFLLYGLFNSDAFVYTPNGIGTILGI 209
Query: 211 SQLSLFVIY 237
QL+L+ Y
Sbjct: 210 VQLALYCYY 218
Score = 31.1 bits (67), Expect = 0.74
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
Frame = +1
Query: 19 FMFYLIASPLFGLKEIIQNKSTE---GMPFPIILSGTVVTFMWLLYGIILRNKFLVVQNV 189
F F L SP+ + I++NKSTE G+P+ L ++ + I N L+ N
Sbjct: 24 FAFGLFVSPMPTFRRIMRNKSTEQFSGLPYIYALLNCLICLWYGTPFISHSNAMLMTVNS 83
Query: 190 VALVLCASQLSLFVIY 237
V + LF+++
Sbjct: 84 VGATFQLCYIILFIMH 99
>At1g21460.1 68414.m02683 nodulin MtN3 family protein contains
similarity to MTN3 (nodule development protein)
GB:Y08726 GI:1619601 from [Medicago truncatula]
Length = 247
Score = 49.6 bits (113), Expect = 2e-06
Identities = 26/75 (34%), Positives = 40/75 (53%)
Frame = +1
Query: 13 TAFMFYLIASPLFGLKEIIQNKSTEGMPFPIILSGTVVTFMWLLYGIILRNKFLVVQNVV 192
T F + ASPL ++ +++ KS E MPF + L + W +YG+I R+ F+ + N
Sbjct: 135 TVFSIIMYASPLSIMRLVVKTKSVEFMPFFLSLFVFLCGTSWFVYGLIGRDPFVAIPNGF 194
Query: 193 ALVLCASQLSLFVIY 237
L QL L+ IY
Sbjct: 195 GCALGTLQLILYFIY 209
Score = 32.3 bits (70), Expect = 0.32
Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
Frame = +1
Query: 16 AFMFYLIASPLFGLKEIIQNKSTE---GMPFPIILSGTVVTFMWLLYGIILRNKFLVVQN 186
A +L +P K II+NKSTE G+P+P+ L +++ + L + N + N
Sbjct: 14 ATALFLFLAPSITFKRIIKNKSTEQFSGIPYPMTLLNCLLSAWYGLPFVSKDNTLVSTIN 73
Query: 187 VVALVLCASQLSLFVIY 237
V+ + +F+ Y
Sbjct: 74 GTGAVIETVYVLIFLFY 90
>At5g53190.1 68418.m06612 nodulin MtN3 family protein similar to
MtN3 GI:1619602 (root nodule development) from [Medicago
truncatula]
Length = 263
Score = 49.2 bits (112), Expect = 3e-06
Identities = 24/69 (34%), Positives = 39/69 (56%)
Frame = +1
Query: 31 LIASPLFGLKEIIQNKSTEGMPFPIILSGTVVTFMWLLYGIILRNKFLVVQNVVALVLCA 210
+ SPL +K++I+ +S E MPF + + + +WL YG++ + FL N+VA L
Sbjct: 145 MYGSPLVVMKKVIETRSVEYMPFYLSFFSFLASSLWLAYGLLSHDLFLASPNMVATPLGI 204
Query: 211 SQLSLFVIY 237
QL L+ Y
Sbjct: 205 LQLILYFKY 213
>At1g66770.1 68414.m07590 nodulin MtN3 family protein contains Pfam
PF03083 MtN3/saliva family; similar to LIM7 (cDNAs
induced in meiotic prophase in lily microsporocytes)
GI:431154 from [Lilium longiflorum]
Length = 261
Score = 47.2 bits (107), Expect = 1e-05
Identities = 25/73 (34%), Positives = 39/73 (53%)
Frame = +1
Query: 19 FMFYLIASPLFGLKEIIQNKSTEGMPFPIILSGTVVTFMWLLYGIILRNKFLVVQNVVAL 198
F + ASPL +K +I+ KS E MPF + + G + +W +YG + + FL + N +
Sbjct: 144 FNAMMYASPLSVMKMVIKTKSLEFMPFLLSVVGFLNAGVWTIYGFVPFDPFLAIPNGIGC 203
Query: 199 VLCASQLSLFVIY 237
V QL L+ Y
Sbjct: 204 VFGLVQLILYGTY 216
>At4g10850.1 68417.m01767 nodulin MtN3 family protein similar to
MtN3 GI:1619602 (root nodule development) from [Medicago
truncatula]
Length = 258
Score = 45.6 bits (103), Expect = 3e-05
Identities = 22/73 (30%), Positives = 41/73 (56%)
Frame = +1
Query: 19 FMFYLIASPLFGLKEIIQNKSTEGMPFPIILSGTVVTFMWLLYGIILRNKFLVVQNVVAL 198
F + ASPL +K +I+ KS E MPF + ++G + +W +Y ++ + F+ + N +
Sbjct: 144 FNVMMYASPLSVMKMVIKTKSVEFMPFWLSVAGFLNAGVWTIYALMPFDPFMAIPNGIGC 203
Query: 199 VLCASQLSLFVIY 237
+ +QL L+ Y
Sbjct: 204 LFGLAQLILYGAY 216
>At3g28007.1 68416.m03496 nodulin MtN3 family protein contains Pfam
PF03083 MtN3/saliva family; similar to LIM7 GI:431154
(induced in meiotic prophase in lily microsporocytes)
from [Lilium longiflorum]
Length = 251
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/73 (28%), Positives = 42/73 (57%)
Frame = +1
Query: 19 FMFYLIASPLFGLKEIIQNKSTEGMPFPIILSGTVVTFMWLLYGIILRNKFLVVQNVVAL 198
F+ + +PL + ++I+ KS + MPF + L+ + +W++Y +I + F+++ N +
Sbjct: 141 FVSLMYIAPLTIMSKVIKTKSVKYMPFSLSLANFLNGVVWVIYALIKFDLFILIGNGLGT 200
Query: 199 VLCASQLSLFVIY 237
V A QL L+ Y
Sbjct: 201 VSGAVQLILYACY 213
>At4g15920.1 68417.m02418 nodulin MtN3 family protein similar to
MtN3 GI:1619602 (root nodule development) from [Medicago
truncatula]
Length = 241
Score = 42.3 bits (95), Expect = 3e-04
Identities = 22/69 (31%), Positives = 36/69 (52%)
Frame = +1
Query: 31 LIASPLFGLKEIIQNKSTEGMPFPIILSGTVVTFMWLLYGIILRNKFLVVQNVVALVLCA 210
+ SPL +K ++ KS + MPF + + +W +Y ++ + FL+V N V V
Sbjct: 141 MYGSPLSAMKTVVTTKSVKYMPFWLSFFLFLNGAIWAVYALLQHDVFLLVPNGVGFVFGT 200
Query: 211 SQLSLFVIY 237
QL L+ IY
Sbjct: 201 MQLILYGIY 209
>At3g16690.1 68416.m02132 nodulin MtN3 family protein contains Pfam
PF03083 MtN3/saliva family
Length = 230
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/69 (27%), Positives = 36/69 (52%)
Frame = +1
Query: 31 LIASPLFGLKEIIQNKSTEGMPFPIILSGTVVTFMWLLYGIILRNKFLVVQNVVALVLCA 210
+ SPL +K ++ +S + MPF + + +W +Y ++L + FL+V N + L
Sbjct: 141 MYGSPLSAIKTVVTTRSVQFMPFWLSFFLFLNGAIWGVYALLLHDMFLLVPNGMGFFLGI 200
Query: 211 SQLSLFVIY 237
QL ++ Y
Sbjct: 201 MQLLIYAYY 209
>At2g45030.1 68415.m05606 mitochondrial elongation factor, putative
similar to SP|P25039 Elongation factor G 1,
mitochondrial precursor (mEF-G-1) {Saccharomyces
cerevisiae}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03764: Elongation factor
G domain IV, PF00679: Elongation factor G C-terminus
Length = 754
Score = 29.1 bits (62), Expect = 3.0
Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 6/48 (12%)
Frame = -1
Query: 248 GLDGYITKSDSCDAHSTK------ATTFCTTKNLFLNIIPYSSHMNVT 123
G DG K DS D K A T+CT K+ +NII H++ T
Sbjct: 100 GRDGVGAKMDSMDLEREKGITIQSAATYCTWKDYKVNIIDTPGHVDFT 147
>At1g45332.1 68414.m05195 mitochondrial elongation factor, putative
similar to mitochondrial elongation factor GI:3917 from
[Saccharomyces cerevisiae]
Length = 754
Score = 29.1 bits (62), Expect = 3.0
Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 6/48 (12%)
Frame = -1
Query: 248 GLDGYITKSDSCDAHSTK------ATTFCTTKNLFLNIIPYSSHMNVT 123
G DG K DS D K A T+CT K+ +NII H++ T
Sbjct: 100 GRDGVGAKMDSMDLEREKGITIQSAATYCTWKDYKVNIIDTPGHVDFT 147
>At5g17680.1 68418.m02072 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1294
Score = 28.3 bits (60), Expect = 5.2
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +1
Query: 346 DNLKVHQSLCSARSYRTFDACEQDGHIQILYPLPIRCVSYYCHQQYLLLIGR-CT 507
+NLK+H CS + DACE ++ YP P + Y +LLL R CT
Sbjct: 1132 NNLKIH---CSC-ILKDADACELVVMDEVWYPDPKAFTNMYFGSDHLLLFSRTCT 1182
>At3g45600.1 68416.m04925 senescence-associated family protein
similar to senescence-associated protein 5 [Hemerocallis
hybrid cultivar] gi|3551954|gb|AAC34855
Length = 285
Score = 27.5 bits (58), Expect = 9.2
Identities = 22/80 (27%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Frame = +1
Query: 19 FMFYLIASPLFGLKEIIQNK--STEGMPF---PIILSGTVVTFMWL--LYGIILRNKFLV 177
F+ +L++ P+ G + ++ ST+ + F P+I+ G + + L G RNKFL+
Sbjct: 13 FLTFLLSIPILGGGIWLSSRANSTDCLRFLQWPLIVIGISIMVVSLAGFAGACYRNKFLM 72
Query: 178 VQNVVALVLCASQLSLFVIY 237
+V ++L + L F+I+
Sbjct: 73 WLYLVVMLLIIAALIGFIIF 92
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,722,371
Number of Sequences: 28952
Number of extensions: 303602
Number of successful extensions: 575
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 562
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 575
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1516419560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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