Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0973
         (687 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    22   4.1  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    22   4.1  
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    21   7.2  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    21   9.5  

>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 14/34 (41%), Positives = 16/34 (47%), Gaps = 8/34 (23%)
 Frame = +1

Query: 262 KQKLRWCQDRQEQIKMDS--------LASHHSAN 339
           KQ + WC   QEQ   +S        LA H SAN
Sbjct: 306 KQTISWCYKLQEQFVTNSEVRTELFKLAQHVSAN 339


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 14/34 (41%), Positives = 16/34 (47%), Gaps = 8/34 (23%)
 Frame = +1

Query: 262 KQKLRWCQDRQEQIKMDS--------LASHHSAN 339
           KQ + WC   QEQ   +S        LA H SAN
Sbjct: 306 KQTISWCYKLQEQFVTNSEVRTELFKLAQHVSAN 339


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -2

Query: 158 LQHICSIPQHNHPSFEA*PFY 96
           +Q    + QHN P F+A  F+
Sbjct: 204 VQIFIDVVQHNRPEFKAARFF 224


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = +2

Query: 605 SIEHLRHAGVHLPTRPN 655
           SIE  + A  HL TRPN
Sbjct: 129 SIEKHQGAVCHLETRPN 145


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,210
Number of Sequences: 336
Number of extensions: 4117
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)