Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0973
(687 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_54859| Best HMM Match : RVT_1 (HMM E-Value=0) 37 0.013
SB_40928| Best HMM Match : MtrG (HMM E-Value=6) 37 0.013
SB_34404| Best HMM Match : MtrG (HMM E-Value=6) 37 0.013
SB_32387| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.013
SB_15964| Best HMM Match : Exo_endo_phos (HMM E-Value=3.3e-15) 37 0.013
SB_15148| Best HMM Match : Exo_endo_phos (HMM E-Value=3.3e-15) 37 0.013
SB_1673| Best HMM Match : MtrG (HMM E-Value=6) 37 0.013
SB_54537| Best HMM Match : Mlp (HMM E-Value=2.4) 37 0.013
SB_44548| Best HMM Match : MtrG (HMM E-Value=6) 37 0.013
SB_41617| Best HMM Match : RVT_1 (HMM E-Value=0) 37 0.013
SB_6031| Best HMM Match : RVT_1 (HMM E-Value=3.4) 37 0.013
SB_45447| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.023
SB_33535| Best HMM Match : RVT_1 (HMM E-Value=1.4013e-45) 36 0.023
SB_31815| Best HMM Match : Lipase_GDSL (HMM E-Value=0.0024) 36 0.023
SB_32319| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.023
SB_34098| Best HMM Match : RVT_1 (HMM E-Value=0) 36 0.041
SB_1360| Best HMM Match : RVT_1 (HMM E-Value=0) 35 0.054
SB_36393| Best HMM Match : IF2_N (HMM E-Value=5.1) 34 0.094
SB_17785| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.12
SB_48946| Best HMM Match : RVT_1 (HMM E-Value=1.49939e-43) 33 0.16
SB_17625| Best HMM Match : Myb_DNA-binding (HMM E-Value=6.8) 33 0.29
SB_8271| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.29
SB_37314| Best HMM Match : Mlp (HMM E-Value=2) 32 0.38
SB_20922| Best HMM Match : RVT_1 (HMM E-Value=0) 32 0.38
SB_25567| Best HMM Match : RVT_1 (HMM E-Value=0) 32 0.50
SB_32796| Best HMM Match : MSG (HMM E-Value=2.7) 31 1.2
SB_15552| Best HMM Match : SCP (HMM E-Value=3.6) 30 1.5
SB_31266| Best HMM Match : PKI (HMM E-Value=1) 30 1.5
SB_42160| Best HMM Match : RVT_1 (HMM E-Value=0) 30 2.0
SB_24663| Best HMM Match : Exo_endo_phos (HMM E-Value=6.7e-05) 30 2.0
SB_8718| Best HMM Match : Lipase_GDSL (HMM E-Value=0.023) 30 2.0
SB_45895| Best HMM Match : RVT_1 (HMM E-Value=0.00031) 30 2.0
SB_40728| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_27722| Best HMM Match : RVT_1 (HMM E-Value=0.00011) 30 2.0
SB_26566| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_22389| Best HMM Match : RVT_1 (HMM E-Value=1.6e-37) 30 2.0
SB_37284| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_58895| Best HMM Match : SRCR (HMM E-Value=0) 28 6.2
SB_55228| Best HMM Match : RVT_1 (HMM E-Value=0.028) 28 6.2
SB_45246| Best HMM Match : zf-MYND (HMM E-Value=0.19) 28 8.1
SB_26060| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_11898| Best HMM Match : DMP1 (HMM E-Value=1.6) 28 8.1
>SB_54859| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 559
Score = 37.1 bits (82), Expect = 0.013
Identities = 17/55 (30%), Positives = 31/55 (56%)
Frame = +3
Query: 510 IIQKRDISFTSKEVKRVINSMHRGKSPGYDGSASSILGMLESTCPRVLILVFNNL 674
I+Q D T +E+++ I++ GKSPG+DG ++ + C R +L+ N+
Sbjct: 80 IMQSMDDPVTDQELEKAISNTKLGKSPGFDGVLPEVI-VYGGRCLRAFLLILFNI 133
>SB_40928| Best HMM Match : MtrG (HMM E-Value=6)
Length = 272
Score = 37.1 bits (82), Expect = 0.013
Identities = 17/55 (30%), Positives = 31/55 (56%)
Frame = +3
Query: 510 IIQKRDISFTSKEVKRVINSMHRGKSPGYDGSASSILGMLESTCPRVLILVFNNL 674
I+Q D T +E+++ I++ GKSPG+DG ++ + C R +L+ N+
Sbjct: 128 IMQSMDDPVTDQELEKAISNTKLGKSPGFDGVLPEVI-VYGGRCLRAFLLILFNI 181
>SB_34404| Best HMM Match : MtrG (HMM E-Value=6)
Length = 253
Score = 37.1 bits (82), Expect = 0.013
Identities = 17/55 (30%), Positives = 31/55 (56%)
Frame = +3
Query: 510 IIQKRDISFTSKEVKRVINSMHRGKSPGYDGSASSILGMLESTCPRVLILVFNNL 674
I+Q D T +E+++ I++ GKSPG+DG ++ + C R +L+ N+
Sbjct: 90 IMQSMDDPVTDQELEKAISNTKLGKSPGFDGVLPEVI-VYGGRCLRAFLLILFNI 143
>SB_32387| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 912
Score = 37.1 bits (82), Expect = 0.013
Identities = 17/55 (30%), Positives = 31/55 (56%)
Frame = +3
Query: 510 IIQKRDISFTSKEVKRVINSMHRGKSPGYDGSASSILGMLESTCPRVLILVFNNL 674
I+Q D T +E+++ I++ GKSPG+DG ++ + C R +L+ N+
Sbjct: 394 IMQSMDDPVTDQELEKAISNTKLGKSPGFDGVLPEVI-VYGGRCLRAFLLILFNI 447
>SB_15964| Best HMM Match : Exo_endo_phos (HMM E-Value=3.3e-15)
Length = 602
Score = 37.1 bits (82), Expect = 0.013
Identities = 17/55 (30%), Positives = 31/55 (56%)
Frame = +3
Query: 510 IIQKRDISFTSKEVKRVINSMHRGKSPGYDGSASSILGMLESTCPRVLILVFNNL 674
I+Q D T +E+++ I++ GKSPG+DG ++ + C R +L+ N+
Sbjct: 479 IMQSMDDPVTDQELEKAISNTKLGKSPGFDGVLPEVI-VYGGRCLRAFLLILFNI 532
>SB_15148| Best HMM Match : Exo_endo_phos (HMM E-Value=3.3e-15)
Length = 683
Score = 37.1 bits (82), Expect = 0.013
Identities = 17/55 (30%), Positives = 31/55 (56%)
Frame = +3
Query: 510 IIQKRDISFTSKEVKRVINSMHRGKSPGYDGSASSILGMLESTCPRVLILVFNNL 674
I+Q D T +E+++ I++ GKSPG+DG ++ + C R +L+ N+
Sbjct: 479 IMQSMDDPVTDQELEKAISNTKLGKSPGFDGVLPEVI-VYGGRCLRAFLLILFNI 532
>SB_1673| Best HMM Match : MtrG (HMM E-Value=6)
Length = 220
Score = 37.1 bits (82), Expect = 0.013
Identities = 17/55 (30%), Positives = 31/55 (56%)
Frame = +3
Query: 510 IIQKRDISFTSKEVKRVINSMHRGKSPGYDGSASSILGMLESTCPRVLILVFNNL 674
I+Q D T +E+++ I++ GKSPG+DG ++ + C R +L+ N+
Sbjct: 128 IMQSMDDPVTDQELEKAISNTKLGKSPGFDGVLPEVI-VYGGRCLRAFLLILFNI 181
>SB_54537| Best HMM Match : Mlp (HMM E-Value=2.4)
Length = 387
Score = 37.1 bits (82), Expect = 0.013
Identities = 17/55 (30%), Positives = 31/55 (56%)
Frame = +3
Query: 510 IIQKRDISFTSKEVKRVINSMHRGKSPGYDGSASSILGMLESTCPRVLILVFNNL 674
I+Q D T +E+++ I++ GKSPG+DG ++ + C R +L+ N+
Sbjct: 265 IMQSMDDPVTDQELEKAISNTKLGKSPGFDGVLPEVI-VYGGRCLRAFLLILFNI 318
>SB_44548| Best HMM Match : MtrG (HMM E-Value=6)
Length = 272
Score = 37.1 bits (82), Expect = 0.013
Identities = 17/55 (30%), Positives = 31/55 (56%)
Frame = +3
Query: 510 IIQKRDISFTSKEVKRVINSMHRGKSPGYDGSASSILGMLESTCPRVLILVFNNL 674
I+Q D T +E+++ I++ GKSPG+DG ++ + C R +L+ N+
Sbjct: 128 IMQSMDDPVTDQELEKAISNTKLGKSPGFDGVLPEVI-VYGGRCLRAFLLILFNI 181
>SB_41617| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 675
Score = 37.1 bits (82), Expect = 0.013
Identities = 17/55 (30%), Positives = 31/55 (56%)
Frame = +3
Query: 510 IIQKRDISFTSKEVKRVINSMHRGKSPGYDGSASSILGMLESTCPRVLILVFNNL 674
I+Q D T +E+++ I++ GKSPG+DG ++ + C R +L+ N+
Sbjct: 128 IMQSMDDPVTDQELEKAISNTKLGKSPGFDGVLPEVI-VYGGRCLRAFLLILFNI 181
>SB_6031| Best HMM Match : RVT_1 (HMM E-Value=3.4)
Length = 378
Score = 37.1 bits (82), Expect = 0.013
Identities = 17/55 (30%), Positives = 31/55 (56%)
Frame = +3
Query: 510 IIQKRDISFTSKEVKRVINSMHRGKSPGYDGSASSILGMLESTCPRVLILVFNNL 674
I+Q D T +E+++ I++ GKSPG+DG ++ + C R +L+ N+
Sbjct: 128 IMQSMDDPVTDQELEKAISNTKLGKSPGFDGVLPEVI-VYGGRCLRAFLLILFNI 181
>SB_45447| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1200
Score = 36.3 bits (80), Expect = 0.023
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +3
Query: 525 DISFTSKEVKRVINSMHRGKSPGYDGSASSILGMLESTCPRVLILVFNNL 674
D FT E+ I S+ GK+PG D + +L E T + L ++FN +
Sbjct: 831 DHEFTELEITNAIKSLKTGKAPGADNILNEVLKCGEETLKKPLQILFNKI 880
>SB_33535| Best HMM Match : RVT_1 (HMM E-Value=1.4013e-45)
Length = 469
Score = 36.3 bits (80), Expect = 0.023
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +3
Query: 525 DISFTSKEVKRVINSMHRGKSPGYDGSASSILGMLESTCPRVLILVFNNL 674
D FT E+ I S+ GK+PG D + +L E T + L ++FN +
Sbjct: 128 DHGFTELEITNAIKSLKTGKAPGADNILNEVLKCGEETLKKPLQILFNKI 177
>SB_31815| Best HMM Match : Lipase_GDSL (HMM E-Value=0.0024)
Length = 1163
Score = 36.3 bits (80), Expect = 0.023
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +3
Query: 525 DISFTSKEVKRVINSMHRGKSPGYDGSASSILGMLESTCPRVLILVFNNL 674
D FT E+ I S+ GK+PG D + +L E T + L ++FN +
Sbjct: 1076 DHEFTELEITNAIKSLKTGKAPGADNILNEVLKCGEETLKKPLQILFNKI 1125
>SB_32319| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 551
Score = 36.3 bits (80), Expect = 0.023
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +3
Query: 525 DISFTSKEVKRVINSMHRGKSPGYDGSASSILGMLESTCPRVLILVFNNL 674
D FT E+ I S+ GK+PG D + +L E T + L ++FN +
Sbjct: 128 DHEFTELEITNAIKSLKTGKAPGADNILNEVLKCGEETLKKPLQILFNKI 177
>SB_34098| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 388
Score = 35.5 bits (78), Expect = 0.041
Identities = 16/54 (29%), Positives = 30/54 (55%)
Frame = +3
Query: 513 IQKRDISFTSKEVKRVINSMHRGKSPGYDGSASSILGMLESTCPRVLILVFNNL 674
+Q D T +E+++ I++ GKSPG+DG ++ + C R +L+ N+
Sbjct: 1 MQSMDDPVTDQELEKAISNTKLGKSPGFDGVLPEVI-VYGGRCLRAFLLILFNI 53
>SB_1360| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 591
Score = 35.1 bits (77), Expect = 0.054
Identities = 16/55 (29%), Positives = 31/55 (56%)
Frame = +3
Query: 510 IIQKRDISFTSKEVKRVINSMHRGKSPGYDGSASSILGMLESTCPRVLILVFNNL 674
I++ D T +E+++ I++ GKSPG+DG ++ + C R +L+ N+
Sbjct: 3 IVKTVDDPVTDQELEKAISNTKLGKSPGFDGVLPEVI-VYGGRCLRAFLLILFNI 56
>SB_36393| Best HMM Match : IF2_N (HMM E-Value=5.1)
Length = 275
Score = 34.3 bits (75), Expect = 0.094
Identities = 16/55 (29%), Positives = 30/55 (54%)
Frame = +3
Query: 510 IIQKRDISFTSKEVKRVINSMHRGKSPGYDGSASSILGMLESTCPRVLILVFNNL 674
I+ D T +E+++ I++ GKSPG+DG ++ + C R +L+ N+
Sbjct: 103 IMLSMDDPVTDQELEKAISNTKLGKSPGFDGVLPEVI-VYGGRCLRAFLLILFNI 156
>SB_17785| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 33.9 bits (74), Expect = 0.12
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = +3
Query: 513 IQKRDISFTSKEVKRVINSMHRGKSPGYDGSASSILGMLESTCPRVLILVFNNL 674
+Q D T E+K I++ GKSPG+DG ++ + C R +L+ N+
Sbjct: 1 MQSMDDPVTDLELKIAISNTKLGKSPGFDGVLPEVI-VYGGRCLRAFLLILFNI 53
>SB_48946| Best HMM Match : RVT_1 (HMM E-Value=1.49939e-43)
Length = 1074
Score = 33.5 bits (73), Expect = 0.16
Identities = 16/55 (29%), Positives = 30/55 (54%)
Frame = +3
Query: 510 IIQKRDISFTSKEVKRVINSMHRGKSPGYDGSASSILGMLESTCPRVLILVFNNL 674
I+Q D T +E+++ I++ KSPG+DG ++ + C R +L+ N+
Sbjct: 539 IMQSMDDPVTDQELEKAISNTKLVKSPGFDGVLPEVI-VYGGRCLRAFLLILFNI 592
>SB_17625| Best HMM Match : Myb_DNA-binding (HMM E-Value=6.8)
Length = 217
Score = 32.7 bits (71), Expect = 0.29
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +3
Query: 510 IIQKRDISFTSKEVKRVINSMHRGKSPGYDGSASSIL 620
I+Q D T +E+++ I++ GKSPG+DG ++
Sbjct: 128 IMQSMDDPVTDQELEKAISNTKLGKSPGFDGVLPEVI 164
>SB_8271| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 167
Score = 32.7 bits (71), Expect = 0.29
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +3
Query: 510 IIQKRDISFTSKEVKRVINSMHRGKSPGYDGSASSIL 620
I+Q D T +E+++ I++ GKSPG+DG ++
Sbjct: 128 IMQSMDDPVTDQELEKAISNTKLGKSPGFDGVLPEVI 164
>SB_37314| Best HMM Match : Mlp (HMM E-Value=2)
Length = 360
Score = 32.3 bits (70), Expect = 0.38
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +3
Query: 510 IIQKRDISFTSKEVKRVINSMHRGKSPGYDG 602
I+Q D T +E+++ I++ GKSPG+DG
Sbjct: 320 IMQSMDDPVTDQELEKAISNTKLGKSPGFDG 350
>SB_20922| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 576
Score = 32.3 bits (70), Expect = 0.38
Identities = 14/48 (29%), Positives = 28/48 (58%)
Frame = +3
Query: 531 SFTSKEVKRVINSMHRGKSPGYDGSASSILGMLESTCPRVLILVFNNL 674
S + +E+++ I++ GKSPG+DG ++ + C R +L+ N+
Sbjct: 189 SSSDQELEKAISNTKLGKSPGFDGVLPEVI-VYGGRCLRAFLLILFNI 235
>SB_25567| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 636
Score = 31.9 bits (69), Expect = 0.50
Identities = 14/49 (28%), Positives = 27/49 (55%)
Frame = +3
Query: 528 ISFTSKEVKRVINSMHRGKSPGYDGSASSILGMLESTCPRVLILVFNNL 674
I +E+++ I++ GKSPG+DG ++ + C R +L+ N+
Sbjct: 95 IEVKDQELEKAISNTKLGKSPGFDGVLPEVI-VYGGRCLRAFLLILFNI 142
>SB_32796| Best HMM Match : MSG (HMM E-Value=2.7)
Length = 270
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/61 (26%), Positives = 30/61 (49%)
Frame = +3
Query: 486 VSVARCWNIIQKRDISFTSKEVKRVINSMHRGKSPGYDGSASSILGMLESTCPRVLILVF 665
+S+++C + D +EVK I ++ K+PG+D + +L + T L +F
Sbjct: 168 LSISKCRDQTGPLDSEIRLEEVKLAIENLKNNKAPGHDNILNELLKYGKDTLLPYLTRLF 227
Query: 666 N 668
N
Sbjct: 228 N 228
>SB_15552| Best HMM Match : SCP (HMM E-Value=3.6)
Length = 154
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/56 (30%), Positives = 30/56 (53%)
Frame = +1
Query: 481 GVFRSPVAGTSSRKGISVLHRRRLKELLTACIEVNPLDMMDQHRAS*ACWSPPAHA 648
G+ SP AG S ++G ++ + E + I + ++++S AC +PPAHA
Sbjct: 57 GLSHSPQAGVSDKEGENLANAGSCPEAVAQWI-----GQLGKYKSSGACTNPPAHA 107
>SB_31266| Best HMM Match : PKI (HMM E-Value=1)
Length = 1507
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = -2
Query: 200 PPRPKTSTWPPYGNLQHICSIPQHNHPSF 114
PP PK S PP + Q I P H P F
Sbjct: 432 PPSPKPSRQPPPSSPQRIAPTPGHRRPVF 460
>SB_42160| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 1858
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/61 (26%), Positives = 29/61 (47%)
Frame = +3
Query: 486 VSVARCWNIIQKRDISFTSKEVKRVINSMHRGKSPGYDGSASSILGMLESTCPRVLILVF 665
+S+ +C + D +EVK I ++ K+PG+D + +L + T L +F
Sbjct: 1255 LSIPKCRDQTGPLDSEIRLEEVKLAIENLKNNKAPGHDNILNELLKYGKDTLLPYLTRLF 1314
Query: 666 N 668
N
Sbjct: 1315 N 1315
>SB_24663| Best HMM Match : Exo_endo_phos (HMM E-Value=6.7e-05)
Length = 666
Score = 29.9 bits (64), Expect = 2.0
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +3
Query: 537 TSKEVKRVINSMHRGKSPGYDGSASSILGMLESTCPRVLILVFNNL 674
T+ EV+ I +M GK+PG D + I+ T VL+ +F+ +
Sbjct: 456 TALEVREAIRTMKNGKAPGIDSIHAEIVQADLDTSTTVLLDLFSKI 501
>SB_8718| Best HMM Match : Lipase_GDSL (HMM E-Value=0.023)
Length = 836
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/61 (26%), Positives = 29/61 (47%)
Frame = +3
Query: 486 VSVARCWNIIQKRDISFTSKEVKRVINSMHRGKSPGYDGSASSILGMLESTCPRVLILVF 665
+S+ +C + D +EVK I ++ K+PG+D + +L + T L +F
Sbjct: 612 LSIPKCRDQTGPLDSEIRLEEVKLAIENLKNNKAPGHDNILNELLKYGKDTLLPYLTRLF 671
Query: 666 N 668
N
Sbjct: 672 N 672
>SB_45895| Best HMM Match : RVT_1 (HMM E-Value=0.00031)
Length = 313
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/61 (26%), Positives = 29/61 (47%)
Frame = +3
Query: 486 VSVARCWNIIQKRDISFTSKEVKRVINSMHRGKSPGYDGSASSILGMLESTCPRVLILVF 665
+S+ +C + D +EVK I ++ K+PG+D + +L + T L +F
Sbjct: 11 LSIPKCRDQTGPLDSEIRLEEVKLAIENLKNNKAPGHDNILNELLKYGKDTLLPYLTRLF 70
Query: 666 N 668
N
Sbjct: 71 N 71
>SB_40728| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1317
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/61 (26%), Positives = 29/61 (47%)
Frame = +3
Query: 486 VSVARCWNIIQKRDISFTSKEVKRVINSMHRGKSPGYDGSASSILGMLESTCPRVLILVF 665
+S+ +C + D +EVK I ++ K+PG+D + +L + T L +F
Sbjct: 975 LSIPKCRDQTGPLDSEIRLEEVKLAIENLKNNKAPGHDNILNELLKYGKDTLLPYLTRLF 1034
Query: 666 N 668
N
Sbjct: 1035 N 1035
>SB_27722| Best HMM Match : RVT_1 (HMM E-Value=0.00011)
Length = 315
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/61 (26%), Positives = 29/61 (47%)
Frame = +3
Query: 486 VSVARCWNIIQKRDISFTSKEVKRVINSMHRGKSPGYDGSASSILGMLESTCPRVLILVF 665
+S+ +C + D +EVK I ++ K+PG+D + +L + T L +F
Sbjct: 11 LSIPKCRDQTGPLDSEIRLEEVKLAIENLKNNKAPGHDNILNELLKYGKDTLLPYLTRLF 70
Query: 666 N 668
N
Sbjct: 71 N 71
>SB_26566| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1141
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/61 (26%), Positives = 29/61 (47%)
Frame = +3
Query: 486 VSVARCWNIIQKRDISFTSKEVKRVINSMHRGKSPGYDGSASSILGMLESTCPRVLILVF 665
+S+ +C + D +EVK I ++ K+PG+D + +L + T L +F
Sbjct: 238 LSIPKCRDQTGPLDSEIRLEEVKLAIENLKNNKAPGHDNILNELLKYGKDTLLPYLTRLF 297
Query: 666 N 668
N
Sbjct: 298 N 298
>SB_22389| Best HMM Match : RVT_1 (HMM E-Value=1.6e-37)
Length = 458
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/61 (26%), Positives = 29/61 (47%)
Frame = +3
Query: 486 VSVARCWNIIQKRDISFTSKEVKRVINSMHRGKSPGYDGSASSILGMLESTCPRVLILVF 665
+S+ +C + D +EVK I ++ K+PG+D + +L + T L +F
Sbjct: 11 LSIPKCRDQTGPLDSEIRLEEVKLAIENLKNNKAPGHDNILNELLKYGKDTLLPYLTRLF 70
Query: 666 N 668
N
Sbjct: 71 N 71
>SB_37284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1031
Score = 28.7 bits (61), Expect = 4.7
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +3
Query: 537 TSKEVKRVINSMHRGKSPGYDGSASSILGMLESTCPRVLILVFNNL 674
T+ EV+ I M GK+PG D + +L T VL+ +F+ +
Sbjct: 829 TALEVREAIRIMKNGKAPGIDSIHAEMLQADLDTSTTVLLDLFSKI 874
>SB_58895| Best HMM Match : SRCR (HMM E-Value=0)
Length = 1838
Score = 28.3 bits (60), Expect = 6.2
Identities = 9/34 (26%), Positives = 18/34 (52%)
Frame = -2
Query: 347 GKLLAE*WDASESILICSCLSWHHLNFCLNNSYF 246
G + + WD ++ ++C L +HH + N +F
Sbjct: 1343 GTVCDDSWDIQDAHVVCRSLGYHHAVRAIGNGFF 1376
>SB_55228| Best HMM Match : RVT_1 (HMM E-Value=0.028)
Length = 391
Score = 28.3 bits (60), Expect = 6.2
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +3
Query: 516 QKRDISFTSKEVKRVINSMHRGKSPGYDGSA 608
+K + ++ E V+N+ G+SPG DGS+
Sbjct: 43 EKCEREISNNECLHVLNTFDNGRSPGMDGSS 73
>SB_45246| Best HMM Match : zf-MYND (HMM E-Value=0.19)
Length = 1828
Score = 27.9 bits (59), Expect = 8.1
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -3
Query: 679 RQRLLKTRIRTRGQVDSSMPKMLDADPSYPG 587
R+R + RIR R VD S K + +PS+ G
Sbjct: 380 RRRGTRYRIRARDSVDKSFVKFRNPNPSFSG 410
>SB_26060| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2671
Score = 27.9 bits (59), Expect = 8.1
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
Frame = -3
Query: 160 TYNIFVPSRNITTPPS---RLDPFTSSCCCIQQRSDQS 56
TYN P RN+TTPP+ L+ S C ++ Q+
Sbjct: 1853 TYNARSPPRNVTTPPTPDDSLEGKKSPCAGVENTGTQT 1890
>SB_11898| Best HMM Match : DMP1 (HMM E-Value=1.6)
Length = 1705
Score = 27.9 bits (59), Expect = 8.1
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
Frame = -3
Query: 160 TYNIFVPSRNITTPPS---RLDPFTSSCCCIQQRSDQS 56
TYN P RN+TTPP+ L+ S C ++ Q+
Sbjct: 165 TYNARSPPRNVTTPPTPDDSLEGKKSPCAGVENTGTQT 202
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,649,673
Number of Sequences: 59808
Number of extensions: 499702
Number of successful extensions: 1286
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 1194
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1285
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1781448916
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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