Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0973
         (687 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM079947-1|CAL04093.1|  100|Homo sapiens immunoglobulin heavy ch...    31   2.9  
AM079411-1|CAL03557.1|  101|Homo sapiens immunoglobulin heavy ch...    31   3.8  
AM081198-1|CAL05344.1|  101|Homo sapiens immunoglobulin heavy ch...    31   5.1  
AM081100-1|CAL05246.1|  101|Homo sapiens immunoglobulin heavy ch...    31   5.1  
AM081020-1|CAL05166.1|  101|Homo sapiens immunoglobulin heavy ch...    31   5.1  
AM081642-1|CAL05788.1|  101|Homo sapiens immunoglobulin heavy ch...    30   6.7  
AM081025-1|CAL05171.1|  101|Homo sapiens immunoglobulin heavy ch...    30   6.7  
AM079943-1|CAL04089.1|  101|Homo sapiens immunoglobulin heavy ch...    30   6.7  
AM079529-1|CAL03675.1|  100|Homo sapiens immunoglobulin heavy ch...    30   6.7  
AF471349-1|AAQ05524.1|  125|Homo sapiens Ig heavy chain variable...    30   6.7  
EF178134-1|ABM67289.1|  124|Homo sapiens immunoglobulin heavy ch...    30   8.9  
AM080505-1|CAL04651.1|  101|Homo sapiens immunoglobulin heavy ch...    30   8.9  
AM079244-1|CAL03390.1|  100|Homo sapiens immunoglobulin heavy ch...    30   8.9  
AM079088-1|CAL03234.1|  100|Homo sapiens immunoglobulin heavy ch...    30   8.9  
AJ617479-1|CAE84581.1|  754|Homo sapiens activator interaction d...    30   8.9  

>AM079947-1|CAL04093.1|  100|Homo sapiens immunoglobulin heavy chain
           variable region protein.
          Length = 100

 Score = 31.5 bits (68), Expect = 2.9
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = +2

Query: 140 WNKYVVSYHREAKSRF*AWVEDGKPKNGQTYVDMVESRSCLSR 268
           +N Y +S+ R+A  +   WV  G    G  Y D V+ R  +SR
Sbjct: 32  FNIYAMSWVRQAPGKGLEWVSSGGSGGGTYYADSVKGRFTISR 74


>AM079411-1|CAL03557.1|  101|Homo sapiens immunoglobulin heavy chain
           variable region protein.
          Length = 101

 Score = 31.1 bits (67), Expect = 3.8
 Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = +2

Query: 140 WNKYVVSYHREAKSRF*AWVEDGKPKNGQT-YVDMVESRSCLSR 268
           +N Y +++ R+A  +   WV D     G T Y D V+ R  +SR
Sbjct: 32  FNNYAITWVRQAPGKGLEWVSDISASGGSTYYADSVKGRFTISR 75


>AM081198-1|CAL05344.1|  101|Homo sapiens immunoglobulin heavy chain
           variable region protein.
          Length = 101

 Score = 30.7 bits (66), Expect = 5.1
 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = +2

Query: 140 WNKYVVSYHREAKSRF*AWVEDGKPKNGQT-YVDMVESRSCLSR 268
           +N Y V++ R+A  +   WV   +   G T Y D V+ R  LSR
Sbjct: 32  FNNYAVNWFRQAPGKGLEWVSTIRGSGGSTYYADSVKGRFTLSR 75


>AM081100-1|CAL05246.1|  101|Homo sapiens immunoglobulin heavy chain
           variable region protein.
          Length = 101

 Score = 30.7 bits (66), Expect = 5.1
 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = +2

Query: 140 WNKYVVSYHREAKSRF*AWVEDGKPKNGQT-YVDMVESRSCLSR 268
           +N Y +S+ R+A  +   WV D     G T Y D V+ R  +SR
Sbjct: 32  FNTYAMSWVRQAPGKGLEWVSDISGSGGSTYYADSVKGRFTISR 75


>AM081020-1|CAL05166.1|  101|Homo sapiens immunoglobulin heavy chain
           variable region protein.
          Length = 101

 Score = 30.7 bits (66), Expect = 5.1
 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = +2

Query: 140 WNKYVVSYHREAKSRF*AWVEDGKPKNGQT-YVDMVESRSCLSR 268
           +N Y V++ R+A  +   WV   +   G T Y D V+ R  LSR
Sbjct: 32  FNNYAVNWFRQAPGKGLEWVSTIRGSGGSTYYADSVKGRFTLSR 75


>AM081642-1|CAL05788.1|  101|Homo sapiens immunoglobulin heavy chain
           variable region protein.
          Length = 101

 Score = 30.3 bits (65), Expect = 6.7
 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = +2

Query: 143 NKYVVSYHREAKSRF*AWVEDGKPKNGQT-YVDMVESRSCLSR 268
           + Y +S+ R+A  R  AWV      +G T Y D V+ R  +SR
Sbjct: 33  SNYAMSWVRQAPGRGLAWVSSISASDGSTYYADSVKGRFTISR 75


>AM081025-1|CAL05171.1|  101|Homo sapiens immunoglobulin heavy chain
           variable region protein.
          Length = 101

 Score = 30.3 bits (65), Expect = 6.7
 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = +2

Query: 140 WNKYVVSYHREAKSRF*AWVEDGKPKNGQTYV-DMVESRSCLSR 268
           +N Y +S+ R+A  +   WV       G TY  D V+ RS +SR
Sbjct: 32  FNNYAMSWVRQAPGKGLEWVSGISGSGGSTYYGDSVKGRSTISR 75


>AM079943-1|CAL04089.1|  101|Homo sapiens immunoglobulin heavy chain
           variable region protein.
          Length = 101

 Score = 30.3 bits (65), Expect = 6.7
 Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
 Frame = +2

Query: 140 WNKYVVSYHREAKSRF*AWVEDGKPKNGQT-YVDMVESRSCLSR 268
           +N Y +S+ R+A  +   WV    P  G T Y D V  R  +SR
Sbjct: 32  FNTYAMSWVRQAPGKGLDWVSTINPDGGSTKYADSVRGRFTISR 75


>AM079529-1|CAL03675.1|  100|Homo sapiens immunoglobulin heavy chain
           variable region protein.
          Length = 100

 Score = 30.3 bits (65), Expect = 6.7
 Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = +2

Query: 140 WNKYVVSYHREAKSRF*AWVEDGKPKNGQT-YVDMVESRSCLSR 268
           ++ YV+S+ R+A  +   WV D     G T Y D V+ R  +SR
Sbjct: 32  FSSYVMSWVRQAPGKGLEWVSDISAGGGSTYYADSVKGRFTISR 75


>AF471349-1|AAQ05524.1|  125|Homo sapiens Ig heavy chain variable
           region, VH3 family protein.
          Length = 125

 Score = 30.3 bits (65), Expect = 6.7
 Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = +2

Query: 140 WNKYVVSYHREAKSRF*AWVEDGKPKNGQT-YVDMVESRSCLSR 268
           ++ YV+S+ R+A  +   WV D     G T Y D V+ R  +SR
Sbjct: 29  FSSYVMSWVRQAPGKGLEWVSDISDGGGSTNYADSVKGRFTISR 72


>EF178134-1|ABM67289.1|  124|Homo sapiens immunoglobulin heavy chain
           variable region protein.
          Length = 124

 Score = 29.9 bits (64), Expect = 8.9
 Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
 Frame = +2

Query: 140 WNKYVVSYHREAKSRF*AWVEDGKPKNGQT-YVDMVESRSCLSR 268
           ++ Y +S+ R+A  +   WV + K   G+T YVD V+ R  +SR
Sbjct: 31  FSSYWMSWVRQAPGKGLEWVANIKQDGGETFYVDSVKGRFSISR 74


>AM080505-1|CAL04651.1|  101|Homo sapiens immunoglobulin heavy chain
           variable region protein.
          Length = 101

 Score = 29.9 bits (64), Expect = 8.9
 Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = +2

Query: 140 WNKYVVSYHREAKSRF*AWVEDGKPKNGQT-YVDMVESRSCLSR 268
           ++ YV+S+ R+A  +   WV       G T Y D V+ RS +SR
Sbjct: 32  FSSYVMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRSTISR 75


>AM079244-1|CAL03390.1|  100|Homo sapiens immunoglobulin heavy chain
           variable region protein.
          Length = 100

 Score = 29.9 bits (64), Expect = 8.9
 Identities = 13/43 (30%), Positives = 22/43 (51%)
 Frame = +2

Query: 140 WNKYVVSYHREAKSRF*AWVEDGKPKNGQTYVDMVESRSCLSR 268
           +NKY +++ R+A  +   W+       G  Y D V+ R  +SR
Sbjct: 32  FNKYAMTWVRQAPGKGLEWISAVSGGGGTNYADSVKGRFTISR 74


>AM079088-1|CAL03234.1|  100|Homo sapiens immunoglobulin heavy chain
           variable region protein.
          Length = 100

 Score = 29.9 bits (64), Expect = 8.9
 Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
 Frame = +2

Query: 140 WNKYVVSYHREAKSRF*AWVEDGKPKNGQT-YVDMVESRSCLSR 268
           ++ YV+S+ R+A  +   WV    P + +T Y D V+ R  +SR
Sbjct: 32  FSSYVLSWVRQAPGKGLEWVSSLTPSDSKTYYADSVKGRFTISR 75


>AJ617479-1|CAE84581.1|  754|Homo sapiens activator interaction
           domain 1 protein protein.
          Length = 754

 Score = 29.9 bits (64), Expect = 8.9
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = -2

Query: 200 PPRPKTSTWPPYGNLQHICSIPQHNHP 120
           PP P+T   PP  +L H+ S   HN P
Sbjct: 653 PPPPQTGVPPPQASLHHLPSPGPHNFP 679


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,066,825
Number of Sequences: 237096
Number of extensions: 2481537
Number of successful extensions: 7917
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 7785
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7917
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7839245960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)