Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0973
(687 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z71180-7|CAK55177.1| 647|Caenorhabditis elegans Hypothetical pr... 32 0.44
Z71180-6|CAI79160.1| 702|Caenorhabditis elegans Hypothetical pr... 32 0.44
Z71180-5|CAD44114.1| 363|Caenorhabditis elegans Hypothetical pr... 32 0.44
Z71180-4|CAA94893.2| 723|Caenorhabditis elegans Hypothetical pr... 32 0.44
AL021475-8|CAK55192.1| 647|Caenorhabditis elegans Hypothetical ... 32 0.44
AL021475-7|CAI79248.1| 702|Caenorhabditis elegans Hypothetical ... 32 0.44
AL021475-6|CAD44157.1| 363|Caenorhabditis elegans Hypothetical ... 32 0.44
AL021475-5|CAA16314.2| 723|Caenorhabditis elegans Hypothetical ... 32 0.44
AF178536-1|AAD56365.1| 723|Caenorhabditis elegans EGL-9 protein. 32 0.44
Z81043-8|CAB02804.2| 550|Caenorhabditis elegans Hypothetical pr... 28 5.4
U61237-1|AAB17542.1| 550|Caenorhabditis elegans M89 protein. 28 5.4
AL023813-2|CAA19424.2| 550|Caenorhabditis elegans Hypothetical ... 28 5.4
AF106592-1|AAK21365.2| 654|Caenorhabditis elegans Semaphorin re... 28 7.2
Z49130-4|CAA88969.1| 280|Caenorhabditis elegans Hypothetical pr... 27 9.5
>Z71180-7|CAK55177.1| 647|Caenorhabditis elegans Hypothetical
protein F22E12.4e protein.
Length = 647
Score = 31.9 bits (69), Expect = 0.44
Identities = 21/88 (23%), Positives = 36/88 (40%)
Frame = +1
Query: 325 HHSANNFPQFWKDTGKFNQKPGLPVSINGIFDHHLIANAFSKHFKVTPQRNTGVFRSPVA 504
+ + +NFP + T K +P +P+ I S+ P RNT VF S
Sbjct: 54 NQTISNFPPTFSITSKTEPEPSIPIQIPQRISSTSTVPFSSEGSAFKPYRNTHVFNS--I 111
Query: 505 GTSSRKGISVLHRRRLKELLTACIEVNP 588
+ S + H L+ + +A + + P
Sbjct: 112 SSESMSSMCTSHEASLEHMSSASLAMFP 139
>Z71180-6|CAI79160.1| 702|Caenorhabditis elegans Hypothetical
protein F22E12.4d protein.
Length = 702
Score = 31.9 bits (69), Expect = 0.44
Identities = 21/88 (23%), Positives = 36/88 (40%)
Frame = +1
Query: 325 HHSANNFPQFWKDTGKFNQKPGLPVSINGIFDHHLIANAFSKHFKVTPQRNTGVFRSPVA 504
+ + +NFP + T K +P +P+ I S+ P RNT VF S
Sbjct: 130 NQTISNFPPTFSITSKTEPEPSIPIQIPQRISSTSTVPFSSEGSAFKPYRNTHVFNS--I 187
Query: 505 GTSSRKGISVLHRRRLKELLTACIEVNP 588
+ S + H L+ + +A + + P
Sbjct: 188 SSESMSSMCTSHEASLEHMSSASLAMFP 215
>Z71180-5|CAD44114.1| 363|Caenorhabditis elegans Hypothetical
protein F22E12.4b protein.
Length = 363
Score = 31.9 bits (69), Expect = 0.44
Identities = 21/88 (23%), Positives = 36/88 (40%)
Frame = +1
Query: 325 HHSANNFPQFWKDTGKFNQKPGLPVSINGIFDHHLIANAFSKHFKVTPQRNTGVFRSPVA 504
+ + +NFP + T K +P +P+ I S+ P RNT VF S
Sbjct: 130 NQTISNFPPTFSITSKTEPEPSIPIQIPQRISSTSTVPFSSEGSAFKPYRNTHVFNS--I 187
Query: 505 GTSSRKGISVLHRRRLKELLTACIEVNP 588
+ S + H L+ + +A + + P
Sbjct: 188 SSESMSSMCTSHEASLEHMSSASLAMFP 215
>Z71180-4|CAA94893.2| 723|Caenorhabditis elegans Hypothetical
protein F22E12.4a protein.
Length = 723
Score = 31.9 bits (69), Expect = 0.44
Identities = 21/88 (23%), Positives = 36/88 (40%)
Frame = +1
Query: 325 HHSANNFPQFWKDTGKFNQKPGLPVSINGIFDHHLIANAFSKHFKVTPQRNTGVFRSPVA 504
+ + +NFP + T K +P +P+ I S+ P RNT VF S
Sbjct: 130 NQTISNFPPTFSITSKTEPEPSIPIQIPQRISSTSTVPFSSEGSAFKPYRNTHVFNS--I 187
Query: 505 GTSSRKGISVLHRRRLKELLTACIEVNP 588
+ S + H L+ + +A + + P
Sbjct: 188 SSESMSSMCTSHEASLEHMSSASLAMFP 215
>AL021475-8|CAK55192.1| 647|Caenorhabditis elegans Hypothetical
protein F22E12.4e protein.
Length = 647
Score = 31.9 bits (69), Expect = 0.44
Identities = 21/88 (23%), Positives = 36/88 (40%)
Frame = +1
Query: 325 HHSANNFPQFWKDTGKFNQKPGLPVSINGIFDHHLIANAFSKHFKVTPQRNTGVFRSPVA 504
+ + +NFP + T K +P +P+ I S+ P RNT VF S
Sbjct: 54 NQTISNFPPTFSITSKTEPEPSIPIQIPQRISSTSTVPFSSEGSAFKPYRNTHVFNS--I 111
Query: 505 GTSSRKGISVLHRRRLKELLTACIEVNP 588
+ S + H L+ + +A + + P
Sbjct: 112 SSESMSSMCTSHEASLEHMSSASLAMFP 139
>AL021475-7|CAI79248.1| 702|Caenorhabditis elegans Hypothetical
protein F22E12.4d protein.
Length = 702
Score = 31.9 bits (69), Expect = 0.44
Identities = 21/88 (23%), Positives = 36/88 (40%)
Frame = +1
Query: 325 HHSANNFPQFWKDTGKFNQKPGLPVSINGIFDHHLIANAFSKHFKVTPQRNTGVFRSPVA 504
+ + +NFP + T K +P +P+ I S+ P RNT VF S
Sbjct: 130 NQTISNFPPTFSITSKTEPEPSIPIQIPQRISSTSTVPFSSEGSAFKPYRNTHVFNS--I 187
Query: 505 GTSSRKGISVLHRRRLKELLTACIEVNP 588
+ S + H L+ + +A + + P
Sbjct: 188 SSESMSSMCTSHEASLEHMSSASLAMFP 215
>AL021475-6|CAD44157.1| 363|Caenorhabditis elegans Hypothetical
protein F22E12.4b protein.
Length = 363
Score = 31.9 bits (69), Expect = 0.44
Identities = 21/88 (23%), Positives = 36/88 (40%)
Frame = +1
Query: 325 HHSANNFPQFWKDTGKFNQKPGLPVSINGIFDHHLIANAFSKHFKVTPQRNTGVFRSPVA 504
+ + +NFP + T K +P +P+ I S+ P RNT VF S
Sbjct: 130 NQTISNFPPTFSITSKTEPEPSIPIQIPQRISSTSTVPFSSEGSAFKPYRNTHVFNS--I 187
Query: 505 GTSSRKGISVLHRRRLKELLTACIEVNP 588
+ S + H L+ + +A + + P
Sbjct: 188 SSESMSSMCTSHEASLEHMSSASLAMFP 215
>AL021475-5|CAA16314.2| 723|Caenorhabditis elegans Hypothetical
protein F22E12.4a protein.
Length = 723
Score = 31.9 bits (69), Expect = 0.44
Identities = 21/88 (23%), Positives = 36/88 (40%)
Frame = +1
Query: 325 HHSANNFPQFWKDTGKFNQKPGLPVSINGIFDHHLIANAFSKHFKVTPQRNTGVFRSPVA 504
+ + +NFP + T K +P +P+ I S+ P RNT VF S
Sbjct: 130 NQTISNFPPTFSITSKTEPEPSIPIQIPQRISSTSTVPFSSEGSAFKPYRNTHVFNS--I 187
Query: 505 GTSSRKGISVLHRRRLKELLTACIEVNP 588
+ S + H L+ + +A + + P
Sbjct: 188 SSESMSSMCTSHEASLEHMSSASLAMFP 215
>AF178536-1|AAD56365.1| 723|Caenorhabditis elegans EGL-9 protein.
Length = 723
Score = 31.9 bits (69), Expect = 0.44
Identities = 21/88 (23%), Positives = 36/88 (40%)
Frame = +1
Query: 325 HHSANNFPQFWKDTGKFNQKPGLPVSINGIFDHHLIANAFSKHFKVTPQRNTGVFRSPVA 504
+ + +NFP + T K +P +P+ I S+ P RNT VF S
Sbjct: 130 NQTISNFPPTFSITSKTEPEPSIPIQIPQRISSTSTVPFSSEGSAFKPYRNTHVFNS--I 187
Query: 505 GTSSRKGISVLHRRRLKELLTACIEVNP 588
+ S + H L+ + +A + + P
Sbjct: 188 SSESMSSMCTSHEASLEHMSSASLAMFP 215
>Z81043-8|CAB02804.2| 550|Caenorhabditis elegans Hypothetical
protein C29F3.2 protein.
Length = 550
Score = 28.3 bits (60), Expect = 5.4
Identities = 16/55 (29%), Positives = 25/55 (45%)
Frame = +1
Query: 400 SINGIFDHHLIANAFSKHFKVTPQRNTGVFRSPVAGTSSRKGISVLHRRRLKELL 564
S + DHHL+ N+F KH R + F + + T G S+ + EL+
Sbjct: 488 SCHSEIDHHLLQNSFFKHVLKLKNRISKYFWNEESNTEGNIGTSLNFLIEIFELI 542
>U61237-1|AAB17542.1| 550|Caenorhabditis elegans M89 protein.
Length = 550
Score = 28.3 bits (60), Expect = 5.4
Identities = 16/55 (29%), Positives = 25/55 (45%)
Frame = +1
Query: 400 SINGIFDHHLIANAFSKHFKVTPQRNTGVFRSPVAGTSSRKGISVLHRRRLKELL 564
S + DHHL+ N+F KH R + F + + T G S+ + EL+
Sbjct: 488 SCHSEIDHHLLQNSFFKHVLKLKNRISKYFWNEESNTEGNIGTSLNFLIEIFELI 542
>AL023813-2|CAA19424.2| 550|Caenorhabditis elegans Hypothetical
protein C29F3.2 protein.
Length = 550
Score = 28.3 bits (60), Expect = 5.4
Identities = 16/55 (29%), Positives = 25/55 (45%)
Frame = +1
Query: 400 SINGIFDHHLIANAFSKHFKVTPQRNTGVFRSPVAGTSSRKGISVLHRRRLKELL 564
S + DHHL+ N+F KH R + F + + T G S+ + EL+
Sbjct: 488 SCHSEIDHHLLQNSFFKHVLKLKNRISKYFWNEESNTEGNIGTSLNFLIEIFELI 542
>AF106592-1|AAK21365.2| 654|Caenorhabditis elegans Semaphorin
related protein 2 protein.
Length = 654
Score = 27.9 bits (59), Expect = 7.2
Identities = 29/85 (34%), Positives = 36/85 (42%), Gaps = 8/85 (9%)
Frame = +1
Query: 361 DTGKFNQKPGL---PVSINGIFDHHLI---ANAFSKHFK-VTPQRNTGVFRSPVAGTSSR 519
DT FNQ G+ P S G F L A+A K+ K V ++ T SR
Sbjct: 285 DTFYFNQFAGVAESPTSFYGAFRSQLAGIGASAICKYSKKVISGSFASGYKESTPDTCSR 344
Query: 520 KG-ISVLHRRRLKELLTACIEVNPL 591
I L R RLK L+ I NP+
Sbjct: 345 ANDIEELSRIRLKPLIKQKISANPI 369
>Z49130-4|CAA88969.1| 280|Caenorhabditis elegans Hypothetical
protein T06D8.6 protein.
Length = 280
Score = 27.5 bits (58), Expect = 9.5
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +1
Query: 256 LFKQKLRWCQDRQEQIKMDSLASHHSANNFPQFWKDTGKF 375
+ K+ RW D + M+++ S H+ANN + W++ K+
Sbjct: 119 MLKKGWRWQDDSLSKSDMENIISIHNANN-EEAWREVLKW 157
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,615,924
Number of Sequences: 27780
Number of extensions: 371029
Number of successful extensions: 933
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 894
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 933
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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