Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0972
         (700 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    26   0.34 
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    25   0.79 
DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory pro...    24   1.4  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    22   4.2  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   7.3  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    21   9.7  

>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 25.8 bits (54), Expect = 0.34
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = +2

Query: 53  MLQIPTSLTTFWRSSFTIASSLPITTVRLKRA 148
           +L IPT   T  +SSF+I+S LP T +   ++
Sbjct: 8   ILVIPTMARTPLKSSFSISSILPETALEAPKS 39


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 24.6 bits (51), Expect = 0.79
 Identities = 16/66 (24%), Positives = 33/66 (50%)
 Frame = +3

Query: 183 HKCSEQTDTKQQDELHGVRLSTLAQGSKDIVRDCFPVEFRLIFAENAIKLMYKRDGLALT 362
           HK  E  D +  D++    L  L + +       FP+++ L+F+E  + L++K   + + 
Sbjct: 668 HKI-ETNDHEIIDKIEMFSLQILNERAGFSAAGFFPIDYSLVFSETKL-LLFKITSVMIA 725

Query: 363 LSNDVH 380
           +S  V+
Sbjct: 726 VSGLVY 731


>DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory
           protein 10 protein.
          Length = 129

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = +3

Query: 573 VDSFRAQWYLQPAKYDKDNLFYIYNREYSKAL 668
           +D+ R  W    AKYDKD    +Y ++Y   +
Sbjct: 94  IDNKRDWWNELEAKYDKDG---VYRQKYKDVI 122


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +3

Query: 522 ESVLTRTATTWAFGVNSVDSFRA 590
           E++  R +     GVNS DSF+A
Sbjct: 13  EAIPKRRSVFLESGVNSADSFKA 35


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = +2

Query: 41  WHLCMLQIPTSLTTFWRSS 97
           +H+ M  +PT L +F++S+
Sbjct: 59  YHIFMHIVPTKLISFYKST 77


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = +3

Query: 324 IKLMYKRDGLALTLSNDVHGNDGRLAFGDGKDKTSPKV 437
           IKL+ +++     LS+D    + +   G+ KDK  PK+
Sbjct: 211 IKLVVEKER-EKELSDDEAEEEKKEEEGEDKDKDKPKI 247


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,259
Number of Sequences: 336
Number of extensions: 2769
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)