Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0972
         (700 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          22   6.4  
EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate isome...    22   6.4  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      22   6.4  
AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase p...    22   6.4  
AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase p...    22   6.4  

>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +1

Query: 70  VPNDILEEQLYNSIVVADYDSAVEK 144
           VP+++  + LYN +VV++  S   K
Sbjct: 566 VPDEVPSDVLYNRLVVSEDGSETFK 590


>EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate
           isomerase protein.
          Length = 247

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 9/34 (26%), Positives = 16/34 (47%)
 Frame = +3

Query: 462 ENNKVYFKILNTERNHIWYWESVLTRTATTWAFG 563
           + ++V F+      N I  W++V+      WA G
Sbjct: 137 KTDEVVFRQTKAIANKINSWDNVVVAYEPVWAIG 170


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +1

Query: 70  VPNDILEEQLYNSIVVADYDSAVEK 144
           VP+++  + LYN +VV++  S   K
Sbjct: 566 VPDEVPSDVLYNRLVVSEDGSETFK 590


>AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -2

Query: 630 NCLCRI*RAAGTTGL 586
           NCL +I +A G TGL
Sbjct: 161 NCLTKIFKADGITGL 175


>AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -2

Query: 630 NCLCRI*RAAGTTGL 586
           NCL +I +A G TGL
Sbjct: 161 NCLTKIFKADGITGL 175


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,191
Number of Sequences: 438
Number of extensions: 3409
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21439440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)