Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0971
         (638 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9BPS2 Cluster: Laminin; n=1; Bombyx mori|Rep: Laminin ...   122   6e-27
UniRef50_P11046 Cluster: Laminin subunit beta-1 precursor; n=6; ...    53   7e-06
UniRef50_Q967S8 Cluster: Laminin beta chain; n=1; Schistocerca g...    38   0.15 
UniRef50_UPI0000E48F4B Cluster: PREDICTED: similar to LOC494988 ...    36   0.62 
UniRef50_A5MTT5 Cluster: Putative uncharacterized protein; n=1; ...    36   1.1  
UniRef50_Q6CG35 Cluster: Similarity; n=1; Yarrowia lipolytica|Re...    36   1.1  
UniRef50_Q4XN97 Cluster: Putative uncharacterized protein; n=1; ...    34   2.5  
UniRef50_Q30ZU2 Cluster: ATP-dependent protease, putative; n=4; ...    33   7.7  

>UniRef50_Q9BPS2 Cluster: Laminin; n=1; Bombyx mori|Rep: Laminin -
            Bombyx mori (Silk moth)
          Length = 1069

 Score =  122 bits (295), Expect = 6e-27
 Identities = 77/200 (38%), Positives = 111/200 (55%)
 Frame = +2

Query: 5    TRRINESVSQLTNIENIIAETAPDLERAKALKDXXXXXXXXXXXXXDMANKVLQSLXXXX 184
            ++RINESVSQLTNIE IIAET PDL++A  L++             +MANKVLQ+L    
Sbjct: 827  SQRINESVSQLTNIETIIAETKPDLDKANTLRENATVVRKDAHLTLEMANKVLQALNETQ 886

Query: 185  XXXXXXXNAIEKANSDIEAAKSD*FQ*H*RXXXXXXXXXXXXXXXXPYDYDFRIYKKIF* 364
                    A++KAN+DI+AAK+D                                +K   
Sbjct: 887  SAQEAAEKAVQKANNDIDAAKNDLAPIAMETEEARIKAINVTNDVESLRSRLSDLQKNRL 946

Query: 365  RLKATR*QVKHEADDVVNRAEGAELKARQLRQNFKQTNKSLTERSSQTLIQGNGAQMLAG 544
            ++++   QVK EADDVVNRA+ AELKA+QL+ +F++TNK+L  +++QT    + AQ+L  
Sbjct: 947  KVESDAEQVKQEADDVVNRAKDAELKAKQLQNDFERTNKTLAAQANQTTKSRDRAQLLLE 1006

Query: 545  PCYEAS**NTNAVKLLANME 604
               + +    + +KLL NME
Sbjct: 1007 RATKLASDTQSQLKLLINME 1026



 Score = 53.2 bits (122), Expect = 5e-06
 Identities = 27/43 (62%), Positives = 33/43 (76%)
 Frame = +1

Query: 253  LIPIALETEQAQKKANETIEDVEALRLRLSHLQKDILKIESDA 381
            L PIA+ETE+A+ KA     DVE+LR RLS LQK+ LK+ESDA
Sbjct: 910  LAPIAMETEEARIKAINVTNDVESLRSRLSDLQKNRLKVESDA 952



 Score = 37.1 bits (82), Expect = 0.36
 Identities = 18/33 (54%), Positives = 19/33 (57%)
 Frame = +3

Query: 540  LDRATKLAXXXXXXXXXXXXWNELYNDHNEQLN 638
            L+RATKLA              ELYNDHNEQLN
Sbjct: 1005 LERATKLASDTQSQLKLLINMEELYNDHNEQLN 1037


>UniRef50_P11046 Cluster: Laminin subunit beta-1 precursor; n=6;
            Diptera|Rep: Laminin subunit beta-1 precursor -
            Drosophila melanogaster (Fruit fly)
          Length = 1790

 Score = 52.8 bits (121), Expect = 7e-06
 Identities = 30/81 (37%), Positives = 41/81 (50%)
 Frame = +2

Query: 11   RINESVSQLTNIENIIAETAPDLERAKALKDXXXXXXXXXXXXXDMANKVLQSLXXXXXX 190
            +IN +VS L N+E II  T PDL+R   L+              D AN V++SL      
Sbjct: 1550 QINRAVSSLKNVEAIIYRTKPDLDRVNNLQSIANATKEKADKILDSANSVVESLAAADES 1609

Query: 191  XXXXXNAIEKANSDIEAAKSD 253
                 +AI++ANS+IE A  D
Sbjct: 1610 QGKAKDAIQQANSNIELAGQD 1630


>UniRef50_Q967S8 Cluster: Laminin beta chain; n=1; Schistocerca
            gregaria|Rep: Laminin beta chain - Schistocerca gregaria
            (Desert locust)
          Length = 1168

 Score = 38.3 bits (85), Expect = 0.15
 Identities = 21/43 (48%), Positives = 26/43 (60%)
 Frame = +1

Query: 253  LIPIALETEQAQKKANETIEDVEALRLRLSHLQKDILKIESDA 381
            L  IA  TE AQ+KANET+ +V  L+ RL  LQ   L+   DA
Sbjct: 1009 LTQIASGTEDAQQKANETVVEVNFLQARLKPLQTQFLQNAHDA 1051


>UniRef50_UPI0000E48F4B Cluster: PREDICTED: similar to LOC494988
            protein; n=4; Strongylocentrotus purpuratus|Rep:
            PREDICTED: similar to LOC494988 protein -
            Strongylocentrotus purpuratus
          Length = 1671

 Score = 36.3 bits (80), Expect = 0.62
 Identities = 23/78 (29%), Positives = 34/78 (43%)
 Frame = +2

Query: 11   RINESVSQLTNIENIIAETAPDLERAKALKDXXXXXXXXXXXXXDMANKVLQSLXXXXXX 190
            +I + ++ L NI+ IIA T  DL+R   LK              D A  V+++L      
Sbjct: 1534 QIEDIIATLENIDEIIAATRDDLQRVNDLKARADAAREYAEDVLDSAEDVVRALNQAEAA 1593

Query: 191  XXXXXNAIEKANSDIEAA 244
                 +AI  A  DI+ A
Sbjct: 1594 QNIADDAINNATKDIKDA 1611


>UniRef50_A5MTT5 Cluster: Putative uncharacterized protein; n=1;
           Streptococcus pneumoniae SP23-BS72|Rep: Putative
           uncharacterized protein - Streptococcus pneumoniae
           SP23-BS72
          Length = 236

 Score = 35.5 bits (78), Expect = 1.1
 Identities = 17/45 (37%), Positives = 28/45 (62%)
 Frame = -1

Query: 194 LVLLEPRQEIVELCSPYLTLDWHYYWQMLHCL*EL*PFPNPVQFL 60
           LV+L  +  I+++ +PY  LD++ YW +LH L  + P   P+Q L
Sbjct: 26  LVILAIKTYILDISAPYSELDYNKYWYVLHTLIYM-PMIFPIQIL 69


>UniRef50_Q6CG35 Cluster: Similarity; n=1; Yarrowia lipolytica|Rep:
           Similarity - Yarrowia lipolytica (Candida lipolytica)
          Length = 459

 Score = 35.5 bits (78), Expect = 1.1
 Identities = 18/60 (30%), Positives = 32/60 (53%)
 Frame = +2

Query: 368 LKATR*QVKHEADDVVNRAEGAELKARQLRQNFKQTNKSLTERSSQTLIQGNGAQMLAGP 547
           L+  R +VK     + ++ + +E+K R L  + KQT K ++E   +  +  +GA  L GP
Sbjct: 22  LRKLRDRVKQRVSSLEHKVDASEVKTRSLDNDKKQTWKVMSELMHRFALSDDGAAELTGP 81


>UniRef50_Q4XN97 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium chabaudi|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 228

 Score = 34.3 bits (75), Expect = 2.5
 Identities = 14/31 (45%), Positives = 21/31 (67%)
 Frame = +2

Query: 425 EGAELKARQLRQNFKQTNKSLTERSSQTLIQ 517
           EGA + ++ +  N+ + NK+LTER   TLIQ
Sbjct: 26  EGASIVSKNISDNYNKINKNLTERDISTLIQ 56


>UniRef50_Q30ZU2 Cluster: ATP-dependent protease, putative; n=4;
           Deltaproteobacteria|Rep: ATP-dependent protease,
           putative - Desulfovibrio desulfuricans (strain G20)
          Length = 829

 Score = 32.7 bits (71), Expect = 7.7
 Identities = 14/32 (43%), Positives = 21/32 (65%)
 Frame = +1

Query: 271 ETEQAQKKANETIEDVEALRLRLSHLQKDILK 366
           E E  QKK  E  E+++A+ L + HLQK++ K
Sbjct: 213 ELESLQKKYKELKEEIDAIFLEVRHLQKEVKK 244


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 441,784,767
Number of Sequences: 1657284
Number of extensions: 6273330
Number of successful extensions: 17588
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 17137
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17584
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 47711253245
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)