Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0971
         (638 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   1.6  
DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    22   5.0  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    21   8.7  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    21   8.7  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -2

Query: 238 FYIAIRFFYCVLSRILC 188
           F + I +FYC L  +LC
Sbjct: 281 FLLCIYYFYCALIILLC 297


>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = -3

Query: 447 LALSSAPSARLTTSSASCXTCYRVAFNL 364
           LAL +A SA L  +SA    CY  ++ +
Sbjct: 5   LALLAASSAFLALASAGNVVCYFTSWTI 32


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 6/18 (33%), Positives = 10/18 (55%)
 Frame = -2

Query: 625 LWSLYNSFHVC*ELYCVC 572
           LW  +  +H+   L C+C
Sbjct: 205 LWHTFGYYHILAMLNCLC 222


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 6/18 (33%), Positives = 10/18 (55%)
 Frame = -2

Query: 625 LWSLYNSFHVC*ELYCVC 572
           LW  +  +H+   L C+C
Sbjct: 205 LWHTFGYYHILAMLNCLC 222


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,873
Number of Sequences: 336
Number of extensions: 1717
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16501678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)