Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0971
         (638 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_02_0206 - 7771835-7771913,7772083-7772219,7772364-7772422,777...    28   5.4  
10_08_0036 + 14325793-14326457,14326610-14328035                       28   7.2  

>02_02_0206 -
           7771835-7771913,7772083-7772219,7772364-7772422,
           7772535-7772610,7772717-7772873,7773241-7773329,
           7773648-7773750,7773919-7774013,7774301-7774367,
           7774894-7775066
          Length = 344

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = -1

Query: 194 LVLLEPRQEIVELCSPYLTLDWHYYWQMLHCL 99
           +V+ +  QE+V+ C  YLT++W  +     CL
Sbjct: 139 VVMCDIDQEVVDFCRTYLTVNWDAFASDKLCL 170


>10_08_0036 + 14325793-14326457,14326610-14328035
          Length = 696

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = -1

Query: 542 QPTFVPRSLELKFD*TVLLRTY 477
           +PTF   +LE+ FD TV LR Y
Sbjct: 245 EPTFTAMALEINFDFTVELRKY 266


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,628,155
Number of Sequences: 37544
Number of extensions: 168468
Number of successful extensions: 434
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 425
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 434
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1573040476
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)