Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0967
(608 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_16757| Best HMM Match : S-antigen (HMM E-Value=0.56) 30 1.3
SB_15319| Best HMM Match : Transposase_9 (HMM E-Value=3.2) 30 1.3
SB_13174| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_49429| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_36107| Best HMM Match : zf-CCHC (HMM E-Value=0.00023) 30 1.7
SB_24180| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_9496| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_49747| Best HMM Match : RVT_1 (HMM E-Value=2.1e-36) 30 1.7
SB_46950| Best HMM Match : zf-CCHC (HMM E-Value=0.0015) 30 1.7
SB_45147| Best HMM Match : zf-CCHC (HMM E-Value=0.0051) 30 1.7
SB_32803| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_23788| Best HMM Match : RVT_1 (HMM E-Value=4.7e-38) 30 1.7
SB_19517| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_18046| Best HMM Match : RVT_1 (HMM E-Value=0.34) 30 1.7
SB_17897| Best HMM Match : Ldl_recept_a (HMM E-Value=1.2e-14) 30 1.7
SB_25409| Best HMM Match : PSD1 (HMM E-Value=7.2) 29 2.2
SB_24050| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_20046| Best HMM Match : UPAR_LY6 (HMM E-Value=3.2) 29 2.9
SB_47225| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_49488| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_44616| Best HMM Match : rve (HMM E-Value=0.012) 28 5.1
SB_24712| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_20652| Best HMM Match : OmpH (HMM E-Value=1.9) 28 5.1
SB_19217| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_12593| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_56854| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_50077| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_2018| Best HMM Match : AIRC (HMM E-Value=5.1) 28 5.1
SB_47005| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.8
SB_38639| Best HMM Match : Avirulence (HMM E-Value=1.5) 28 6.8
SB_51519| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.8
SB_30231| Best HMM Match : POPLD (HMM E-Value=2.5) 28 6.8
SB_12700| Best HMM Match : POPLD (HMM E-Value=1.9) 28 6.8
SB_41555| Best HMM Match : CXC (HMM E-Value=3.9) 27 9.0
SB_33327| Best HMM Match : Tombus_movement (HMM E-Value=3.5) 27 9.0
SB_32960| Best HMM Match : Ribonuc_red_sm (HMM E-Value=0) 27 9.0
SB_24296| Best HMM Match : Pox_A32 (HMM E-Value=1) 27 9.0
SB_22350| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.0
SB_20133| Best HMM Match : Extensin_2 (HMM E-Value=2.1) 27 9.0
SB_7748| Best HMM Match : DUF229 (HMM E-Value=4.5e-10) 27 9.0
SB_57058| Best HMM Match : ROKNT (HMM E-Value=8) 27 9.0
SB_54540| Best HMM Match : Rick_17kDa_Anti (HMM E-Value=2.2) 27 9.0
SB_40686| Best HMM Match : rve (HMM E-Value=0.00016) 27 9.0
SB_39617| Best HMM Match : RVT_1 (HMM E-Value=4.7e-38) 27 9.0
SB_16103| Best HMM Match : RVP (HMM E-Value=0.027) 27 9.0
SB_4090| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.0
SB_2786| Best HMM Match : Pox_A32 (HMM E-Value=0.11) 27 9.0
SB_1252| Best HMM Match : POPLD (HMM E-Value=1.9) 27 9.0
>SB_16757| Best HMM Match : S-antigen (HMM E-Value=0.56)
Length = 1566
Score = 30.3 bits (65), Expect = 1.3
Identities = 19/77 (24%), Positives = 33/77 (42%)
Frame = -3
Query: 375 HQQRGDPEGSQEAYCQEQKIRKEPSPCLCCRMDRRKQRAGRESTFSTSRQHESFRHVTEL 196
+Q D E + +IR++ R++ R+ RE+ RQ E RHV E
Sbjct: 103 YQHIRDYEADKRRLADSIEIRRQEQAKTLEEKKRQRLRS-REAAMEEKRQKERLRHVQEA 161
Query: 195 FRHIKRYFSFVEHLHNF 145
H++ + V+ L +
Sbjct: 162 SLHLRSHQDDVKRLDGY 178
>SB_15319| Best HMM Match : Transposase_9 (HMM E-Value=3.2)
Length = 782
Score = 30.3 bits (65), Expect = 1.3
Identities = 25/94 (26%), Positives = 40/94 (42%)
Frame = +3
Query: 237 Y*RWIPFQLFVFVYPFDNKGKDLAPFESFVLDNKPLGFPLDRPVVDALFKVPNMYFKDIF 416
Y W P QL + V PF KG P++ + + F + R N D+F
Sbjct: 341 YGYW-PQQLNLAVCPFTQKGN---PYKKAAFERLCIEFGMSRKPDFRWKGGRNHGLGDVF 396
Query: 417 IYHEGERFPYKFNIPSYDTQSNVVPKN*I*ITDE 518
+++ GE + I YDT ++ P + +DE
Sbjct: 397 VFYPGEGYRNVHVIRGYDTAADEYPSHLNLFSDE 430
>SB_13174| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1108
Score = 30.3 bits (65), Expect = 1.3
Identities = 21/80 (26%), Positives = 34/80 (42%)
Frame = +3
Query: 279 PFDNKGKDLAPFESFVLDNKPLGFPLDRPVVDALFKVPNMYFKDIFIYHEGERFPYKFNI 458
PF KG P++ + + F L R N D+F+++ GE + I
Sbjct: 155 PFTQKGN---PYKKAAFERLCIEFGLPRKPDFRWKGGRNHGLDDVFVFYPGEGYRNMHVI 211
Query: 459 PSYDTQSNVVPKN*I*ITDE 518
P YDT ++ P + +DE
Sbjct: 212 PGYDTAADEYPSHLNLFSDE 231
>SB_49429| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 918
Score = 29.9 bits (64), Expect = 1.7
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +1
Query: 25 NWMKFFELDWFTTKLTAGQNKIIRNSNE 108
+W++ F+LDW + KL G+N + + E
Sbjct: 219 SWLRLFKLDWPSMKLVEGKNTALSDLTE 246
>SB_36107| Best HMM Match : zf-CCHC (HMM E-Value=0.00023)
Length = 425
Score = 29.9 bits (64), Expect = 1.7
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +1
Query: 25 NWMKFFELDWFTTKLTAGQNKIIRNSNE 108
+W++ F+LDW + KL G+N + + E
Sbjct: 377 SWLRLFKLDWPSIKLVQGKNTALSDLTE 404
>SB_24180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 238
Score = 29.9 bits (64), Expect = 1.7
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +1
Query: 25 NWMKFFELDWFTTKLTAGQNKIIRNSNE 108
+W++ F+LDW + KL G+N + + E
Sbjct: 76 SWLRLFKLDWPSIKLVQGKNTALSDLTE 103
>SB_9496| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2309
Score = 29.9 bits (64), Expect = 1.7
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +1
Query: 25 NWMKFFELDWFTTKLTAGQNKIIRNSNE 108
+W++ F+LDW + KL G+N + + E
Sbjct: 293 SWLRLFKLDWPSIKLVQGKNTALSDLTE 320
>SB_49747| Best HMM Match : RVT_1 (HMM E-Value=2.1e-36)
Length = 877
Score = 29.9 bits (64), Expect = 1.7
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +1
Query: 25 NWMKFFELDWFTTKLTAGQNKIIRNSNE 108
+W++ F+LDW + KL G+N + + E
Sbjct: 76 SWLRLFKLDWPSIKLVQGKNTALSDLTE 103
>SB_46950| Best HMM Match : zf-CCHC (HMM E-Value=0.0015)
Length = 797
Score = 29.9 bits (64), Expect = 1.7
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +1
Query: 25 NWMKFFELDWFTTKLTAGQNKIIRNSNE 108
+W++ F+LDW + KL G+N + + E
Sbjct: 287 SWLRLFKLDWPSIKLVQGKNTALSDLTE 314
>SB_45147| Best HMM Match : zf-CCHC (HMM E-Value=0.0051)
Length = 522
Score = 29.9 bits (64), Expect = 1.7
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +1
Query: 25 NWMKFFELDWFTTKLTAGQNKIIRNSNE 108
+W++ F+LDW + KL G+N + + E
Sbjct: 164 SWLRLFKLDWPSIKLVQGKNTALSDLTE 191
>SB_32803| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 154
Score = 29.9 bits (64), Expect = 1.7
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +1
Query: 25 NWMKFFELDWFTTKLTAGQNKIIRNSNE 108
+W++ F+LDW + KL G+N + + E
Sbjct: 15 SWLRLFKLDWPSIKLVQGKNTALSDLTE 42
>SB_23788| Best HMM Match : RVT_1 (HMM E-Value=4.7e-38)
Length = 1122
Score = 29.9 bits (64), Expect = 1.7
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +1
Query: 25 NWMKFFELDWFTTKLTAGQNKIIRNSNE 108
+W++ F+LDW + KL G+N + + E
Sbjct: 399 SWLRLFKLDWPSIKLVQGKNTALSDLTE 426
>SB_19517| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1696
Score = 29.9 bits (64), Expect = 1.7
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +1
Query: 25 NWMKFFELDWFTTKLTAGQNKIIRNSNE 108
+W++ F+LDW + KL G+N + + E
Sbjct: 467 SWLRLFKLDWPSIKLVQGKNTALSDLTE 494
Score = 29.9 bits (64), Expect = 1.7
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +1
Query: 25 NWMKFFELDWFTTKLTAGQNKIIRNSNE 108
+W++ F+LDW + KL G+N + + E
Sbjct: 1117 SWLRLFKLDWPSIKLVQGKNTALSDLTE 1144
>SB_18046| Best HMM Match : RVT_1 (HMM E-Value=0.34)
Length = 837
Score = 29.9 bits (64), Expect = 1.7
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +1
Query: 25 NWMKFFELDWFTTKLTAGQNKIIRNSNE 108
+W++ F+LDW + KL G+N + + E
Sbjct: 143 SWLRLFKLDWPSMKLVEGKNTALSDLTE 170
>SB_17897| Best HMM Match : Ldl_recept_a (HMM E-Value=1.2e-14)
Length = 1217
Score = 29.9 bits (64), Expect = 1.7
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +1
Query: 25 NWMKFFELDWFTTKLTAGQNKIIRNSNE 108
+W++ F+LDW + KL G+N + + E
Sbjct: 176 SWLRLFKLDWPSIKLVQGKNTALSDLTE 203
>SB_25409| Best HMM Match : PSD1 (HMM E-Value=7.2)
Length = 889
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = -3
Query: 285 RMDRRKQRAGRESTFSTSRQHESFRHVTELFRHIKRYFSFVEHL 154
+M RR + R + S HES RH E +R I Y + ++ L
Sbjct: 463 KMYRRTHKRYRRTHESYRHTHESHRHTHESYRRIHAYSTVIDIL 506
>SB_24050| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1092
Score = 29.5 bits (63), Expect = 2.2
Identities = 22/80 (27%), Positives = 34/80 (42%)
Frame = +3
Query: 279 PFDNKGKDLAPFESFVLDNKPLGFPLDRPVVDALFKVPNMYFKDIFIYHEGERFPYKFNI 458
PF KGK P++ + + F L R L N D+F+++ GE + I
Sbjct: 203 PFTQKGK---PYKKAAFERLCIEFGLPRKPDFRLKGGRNHGLGDVFVFYPGEGYRNVHVI 259
Query: 459 PSYDTQSNVVPKN*I*ITDE 518
YDT + P + +DE
Sbjct: 260 RGYDTAMDEYPSHLNLFSDE 279
>SB_20046| Best HMM Match : UPAR_LY6 (HMM E-Value=3.2)
Length = 419
Score = 29.1 bits (62), Expect = 2.9
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +1
Query: 25 NWMKFFELDWFTTKLTAGQNKIIRNSNE 108
+W++ F+LDW + KL G+N + + E
Sbjct: 349 SWLRLFKLDWPSIKLVQGKNIALSDLTE 376
>SB_47225| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 295
Score = 28.7 bits (61), Expect = 3.9
Identities = 21/80 (26%), Positives = 34/80 (42%)
Frame = +3
Query: 279 PFDNKGKDLAPFESFVLDNKPLGFPLDRPVVDALFKVPNMYFKDIFIYHEGERFPYKFNI 458
PF KG P++ + + F L R N D+F+++ GER+ I
Sbjct: 186 PFTQKGN---PYKKAAFERLCIEFGLPRKPDFRWKGGRNHGLGDVFVFYPGERYRNVHVI 242
Query: 459 PSYDTQSNVVPKN*I*ITDE 518
YDT ++ P + +DE
Sbjct: 243 RGYDTAADEYPSHLNLFSDE 262
>SB_49488| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1228
Score = 28.3 bits (60), Expect = 5.1
Identities = 9/28 (32%), Positives = 18/28 (64%)
Frame = +1
Query: 25 NWMKFFELDWFTTKLTAGQNKIIRNSNE 108
+W++ F+L+W + KL G+N + + E
Sbjct: 344 SWLRLFKLEWPSIKLVQGKNTALSDLTE 371
Score = 28.3 bits (60), Expect = 5.1
Identities = 9/28 (32%), Positives = 18/28 (64%)
Frame = +1
Query: 25 NWMKFFELDWFTTKLTAGQNKIIRNSNE 108
+W++ F+L+W + KL G+N + + E
Sbjct: 827 SWLRLFKLEWPSIKLVQGKNTALSDLTE 854
>SB_44616| Best HMM Match : rve (HMM E-Value=0.012)
Length = 1189
Score = 28.3 bits (60), Expect = 5.1
Identities = 25/88 (28%), Positives = 39/88 (44%), Gaps = 1/88 (1%)
Frame = +3
Query: 237 Y*RWIPFQLFVFVYPFDNKGKDLAPFESFVLDNKPLGFPLDRPVVDALFKVPNMYFK-DI 413
Y W P QL V PF KG P++ + + F L R D +K + D+
Sbjct: 375 YGYW-PQQLNFAVCPFTQKGN---PYKKAAFERLCIEFSLPRKP-DFRWKGGRNHGPGDV 429
Query: 414 FIYHEGERFPYKFNIPSYDTQSNVVPKN 497
F+++ GE + I YDT ++ P +
Sbjct: 430 FVFYPGEGYRNVHVILGYDTAADEYPSH 457
>SB_24712| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 468
Score = 28.3 bits (60), Expect = 5.1
Identities = 21/80 (26%), Positives = 35/80 (43%)
Frame = +3
Query: 279 PFDNKGKDLAPFESFVLDNKPLGFPLDRPVVDALFKVPNMYFKDIFIYHEGERFPYKFNI 458
PF KG P++ + + F L R + N D+F+++ GE + I
Sbjct: 179 PFTQKGN---PYKKAAFERLCIEFGLPRKLDFRWKGGRNHGLGDVFVFYPGEGYRNVHVI 235
Query: 459 PSYDTQSNVVPKN*I*ITDE 518
SYDT ++ P + +DE
Sbjct: 236 CSYDTAADEYPSHLNLFSDE 255
>SB_20652| Best HMM Match : OmpH (HMM E-Value=1.9)
Length = 842
Score = 28.3 bits (60), Expect = 5.1
Identities = 24/83 (28%), Positives = 36/83 (43%), Gaps = 3/83 (3%)
Frame = +3
Query: 279 PFDNKGKDL--APFESFVLD-NKPLGFPLDRPVVDALFKVPNMYFKDIFIYHEGERFPYK 449
PF KG A FE ++ P G P++R N D+F+++ GER
Sbjct: 132 PFTQKGNPYKKAAFERLCIEFGLPPGLPMERR--------RNHGLGDVFVFYPGERCRNV 183
Query: 450 FNIPSYDTQSNVVPKN*I*ITDE 518
I YDT ++ P + +DE
Sbjct: 184 HVIRGYDTAADKYPSHPNLFSDE 206
>SB_19217| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 468
Score = 28.3 bits (60), Expect = 5.1
Identities = 25/87 (28%), Positives = 36/87 (41%)
Frame = +3
Query: 237 Y*RWIPFQLFVFVYPFDNKGKDLAPFESFVLDNKPLGFPLDRPVVDALFKVPNMYFKDIF 416
Y W P QL V PF KG P++ V + + F L R N D+F
Sbjct: 237 YGYW-PQQLNFAVCPFTQKGN---PYKKAVFERLCIEFGLPRNPDFRWKGGRNHGLGDVF 292
Query: 417 IYHEGERFPYKFNIPSYDTQSNVVPKN 497
+++ GE I YDT ++ P +
Sbjct: 293 VFYPGEGNRNVHVIRGYDTAADEYPSH 319
>SB_12593| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 431
Score = 28.3 bits (60), Expect = 5.1
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +3
Query: 408 DIFIYHEGERFPYKFNIPSYDTQSNVVPKN*I*ITDE 518
D+F+++ GE + IP YDT ++ P + +DE
Sbjct: 259 DVFVFYPGEGYRNVHVIPGYDTAADEYPSHINLFSDE 295
>SB_56854| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 183
Score = 28.3 bits (60), Expect = 5.1
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +1
Query: 358 IAPLLMHYSRFLTCISRIFSFTTRVNGSLTNSIFLRMTHS 477
I PL+ L C+S + T ++GSL++ + ++TH+
Sbjct: 45 ILPLVPRPKELLECVSNMRLLTWLLHGSLSHMVHSKITHA 84
>SB_50077| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 907
Score = 28.3 bits (60), Expect = 5.1
Identities = 23/83 (27%), Positives = 36/83 (43%), Gaps = 3/83 (3%)
Frame = +3
Query: 279 PFDNKGKDL--APFESFVLD-NKPLGFPLDRPVVDALFKVPNMYFKDIFIYHEGERFPYK 449
PF KG A FE ++ P G P++R L D+F+++ GE +
Sbjct: 128 PFTQKGNPYKKAAFERLCIEFGLPPGLPMERRAEHGL--------GDVFVFYPGEGYRNV 179
Query: 450 FNIPSYDTQSNVVPKN*I*ITDE 518
I YDT ++ P + +DE
Sbjct: 180 HVIRGYDTAADEYPSHLNLFSDE 202
>SB_2018| Best HMM Match : AIRC (HMM E-Value=5.1)
Length = 298
Score = 28.3 bits (60), Expect = 5.1
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +3
Query: 408 DIFIYHEGERFPYKFNIPSYDTQSNVVPKN*I*ITDE 518
D+F+++ GE + IP YDT ++ P + +DE
Sbjct: 253 DVFVFYPGEGYRNVHVIPGYDTAADEYPSHINLFSDE 289
>SB_47005| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 289
Score = 27.9 bits (59), Expect = 6.8
Identities = 19/73 (26%), Positives = 31/73 (42%)
Frame = +3
Query: 279 PFDNKGKDLAPFESFVLDNKPLGFPLDRPVVDALFKVPNMYFKDIFIYHEGERFPYKFNI 458
PF KG P++ + + F L R V N D+F+++ GE + I
Sbjct: 177 PFTQKGN---PYKKAAFERLCIEFGLPRKQVFRWKGGRNHGLGDVFVFYPGEGYCNVHVI 233
Query: 459 PSYDTQSNVVPKN 497
YDT ++ P +
Sbjct: 234 RGYDTAADEYPSH 246
>SB_38639| Best HMM Match : Avirulence (HMM E-Value=1.5)
Length = 546
Score = 27.9 bits (59), Expect = 6.8
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -3
Query: 255 RESTFSTSRQHESFRHVTELFRHI 184
R + + S +HES RH TEL +HI
Sbjct: 523 RYNNHTASFRHESKRHTTELSKHI 546
>SB_51519| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 177
Score = 27.9 bits (59), Expect = 6.8
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -3
Query: 255 RESTFSTSRQHESFRHVTELFRHI 184
R + + S +HES RH TEL +HI
Sbjct: 154 RYNNHTASFRHESKRHTTELSKHI 177
>SB_30231| Best HMM Match : POPLD (HMM E-Value=2.5)
Length = 181
Score = 27.9 bits (59), Expect = 6.8
Identities = 21/80 (26%), Positives = 34/80 (42%)
Frame = +3
Query: 279 PFDNKGKDLAPFESFVLDNKPLGFPLDRPVVDALFKVPNMYFKDIFIYHEGERFPYKFNI 458
PF KG P++ + + F L R V N D+F+++ GE + I
Sbjct: 48 PFTQKGN---PYKKAAFERLCIEFGLPRKPDFRWKGVRNNGLGDVFVFYPGEGYRNVRVI 104
Query: 459 PSYDTQSNVVPKN*I*ITDE 518
YDT ++ P + +DE
Sbjct: 105 RGYDTAADEYPSHLNLFSDE 124
>SB_12700| Best HMM Match : POPLD (HMM E-Value=1.9)
Length = 461
Score = 27.9 bits (59), Expect = 6.8
Identities = 20/80 (25%), Positives = 34/80 (42%)
Frame = +3
Query: 279 PFDNKGKDLAPFESFVLDNKPLGFPLDRPVVDALFKVPNMYFKDIFIYHEGERFPYKFNI 458
PF KG P++ + + F L R N + D+F+++ GE + I
Sbjct: 267 PFTQKGN---PYKKAAFERLCIEFGLPRKPDFRWKGGRNHWLGDVFVFYPGEGYRNVHVI 323
Query: 459 PSYDTQSNVVPKN*I*ITDE 518
YDT ++ P + +DE
Sbjct: 324 RGYDTAADEYPSHLNLFSDE 343
>SB_41555| Best HMM Match : CXC (HMM E-Value=3.9)
Length = 607
Score = 27.5 bits (58), Expect = 9.0
Identities = 20/80 (25%), Positives = 34/80 (42%)
Frame = +3
Query: 279 PFDNKGKDLAPFESFVLDNKPLGFPLDRPVVDALFKVPNMYFKDIFIYHEGERFPYKFNI 458
PF KG P++ + + F L R N D+F+++ G+R+ I
Sbjct: 288 PFTQKGN---PYKKAAFERLCIEFGLPRKPDFRWKGGRNQGLGDMFVFYPGDRYRNVHVI 344
Query: 459 PSYDTQSNVVPKN*I*ITDE 518
YDT ++ P + +DE
Sbjct: 345 RGYDTAADEYPSHLNLFSDE 364
>SB_33327| Best HMM Match : Tombus_movement (HMM E-Value=3.5)
Length = 527
Score = 27.5 bits (58), Expect = 9.0
Identities = 20/80 (25%), Positives = 34/80 (42%)
Frame = +3
Query: 279 PFDNKGKDLAPFESFVLDNKPLGFPLDRPVVDALFKVPNMYFKDIFIYHEGERFPYKFNI 458
PF KG P++ + + F L R N D+F+++ GE + + I
Sbjct: 288 PFTKKGN---PYKKAAFERLCIEFGLPRKPDFRWKGGRNHGLGDVFVFYPGEGYRNVYVI 344
Query: 459 PSYDTQSNVVPKN*I*ITDE 518
YDT ++ P + +DE
Sbjct: 345 RGYDTAADEYPSHLNLFSDE 364
>SB_32960| Best HMM Match : Ribonuc_red_sm (HMM E-Value=0)
Length = 991
Score = 27.5 bits (58), Expect = 9.0
Identities = 22/81 (27%), Positives = 36/81 (44%), Gaps = 1/81 (1%)
Frame = +3
Query: 279 PFDNKGKDLAPFESFVLDNKPLGFPLDRPVVDALFKVPNMY-FKDIFIYHEGERFPYKFN 455
PF KG P++ + + F L R D +K Y D+F+++ GE +
Sbjct: 705 PFTQKGN---PYKKAAFERLCIEFGLPRKP-DFRWKGGRNYGLGDVFVFYPGEGYRNVHV 760
Query: 456 IPSYDTQSNVVPKN*I*ITDE 518
I YDT ++ P + +DE
Sbjct: 761 IRGYDTAADEYPSHLNLFSDE 781
>SB_24296| Best HMM Match : Pox_A32 (HMM E-Value=1)
Length = 1041
Score = 27.5 bits (58), Expect = 9.0
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +3
Query: 408 DIFIYHEGERFPYKFNIPSYDTQSNVVPKN*I*ITDE 518
D+F+++ GER+ I YDT ++ P + +DE
Sbjct: 499 DVFVFYPGERYRNVHVIRGYDTAADEYPSHLNRFSDE 535
>SB_22350| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1967
Score = 27.5 bits (58), Expect = 9.0
Identities = 13/41 (31%), Positives = 25/41 (60%)
Frame = -3
Query: 381 IMHQQRGDPEGSQEAYCQEQKIRKEPSPCLCCRMDRRKQRA 259
++HQ++ E Q++ C E+++ +E + L C + KQRA
Sbjct: 1623 LLHQEKLLKEKQQQSACVEKQVEQELA-LLRCELAEAKQRA 1662
>SB_20133| Best HMM Match : Extensin_2 (HMM E-Value=2.1)
Length = 762
Score = 27.5 bits (58), Expect = 9.0
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +1
Query: 121 KEDSVPMTEIMKMLDEGKVPFDMSEEFCYMPKRLMLPRGTEGG 249
K++ TE LDE K D+ E Y K+ +P+GT+ G
Sbjct: 592 KKEVSAATESKDALDETKKCKDLPVENAYENKKNYVPQGTQAG 634
>SB_7748| Best HMM Match : DUF229 (HMM E-Value=4.5e-10)
Length = 784
Score = 27.5 bits (58), Expect = 9.0
Identities = 21/50 (42%), Positives = 23/50 (46%)
Frame = +3
Query: 216 KTHAA*RY*RWIPFQLFVFVYPFDNKGKDLAPFESFVLDNKPLGFPLDRP 365
+T AA R RW FQ V Y DN G L F VL+ P DRP
Sbjct: 314 RTSAAYRK-RWRAFQELVNTYNIDNYG--LTHFSCEVLNQYGYTNPYDRP 360
>SB_57058| Best HMM Match : ROKNT (HMM E-Value=8)
Length = 200
Score = 27.5 bits (58), Expect = 9.0
Identities = 11/42 (26%), Positives = 22/42 (52%)
Frame = +1
Query: 55 FTTKLTAGQNKIIRNSNEFVIFKEDSVPMTEIMKMLDEGKVP 180
+ K TA +K ++NE +E+ +P+ + + D+ VP
Sbjct: 142 YNDKSTAHNDKRTTDNNESTAVREEKIPLPCVASLFDQTAVP 183
>SB_54540| Best HMM Match : Rick_17kDa_Anti (HMM E-Value=2.2)
Length = 558
Score = 27.5 bits (58), Expect = 9.0
Identities = 21/80 (26%), Positives = 33/80 (41%)
Frame = +3
Query: 279 PFDNKGKDLAPFESFVLDNKPLGFPLDRPVVDALFKVPNMYFKDIFIYHEGERFPYKFNI 458
PF KG P++ + + F L R N D+F+++ GE + I
Sbjct: 242 PFAQKGN---PYKKAAFERLCIEFGLPREPDFRWKGGRNHGLGDVFVFYPGEGYRNVHVI 298
Query: 459 PSYDTQSNVVPKN*I*ITDE 518
YDT ++ P N +DE
Sbjct: 299 RGYDTAADEYPSNLNLFSDE 318
>SB_40686| Best HMM Match : rve (HMM E-Value=0.00016)
Length = 1586
Score = 27.5 bits (58), Expect = 9.0
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +3
Query: 408 DIFIYHEGERFPYKFNIPSYDTQSNVVPKN*I*ITDE 518
D+F+++ GER+ I YDT ++ P + +DE
Sbjct: 158 DVFVFYPGERYRNVHVIRGYDTAADEYPSHINMFSDE 194
>SB_39617| Best HMM Match : RVT_1 (HMM E-Value=4.7e-38)
Length = 1084
Score = 27.5 bits (58), Expect = 9.0
Identities = 9/28 (32%), Positives = 17/28 (60%)
Frame = +1
Query: 25 NWMKFFELDWFTTKLTAGQNKIIRNSNE 108
+W++ F+LDW + KL +N + + E
Sbjct: 365 SWLRLFKLDWPSIKLVQSKNTALSDLTE 392
>SB_16103| Best HMM Match : RVP (HMM E-Value=0.027)
Length = 274
Score = 27.5 bits (58), Expect = 9.0
Identities = 9/28 (32%), Positives = 17/28 (60%)
Frame = +1
Query: 25 NWMKFFELDWFTTKLTAGQNKIIRNSNE 108
+W++ F+LDW + KL +N + + E
Sbjct: 135 SWLRLFKLDWPSIKLVQSKNTALSDLTE 162
>SB_4090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2342
Score = 27.5 bits (58), Expect = 9.0
Identities = 20/80 (25%), Positives = 34/80 (42%)
Frame = +3
Query: 279 PFDNKGKDLAPFESFVLDNKPLGFPLDRPVVDALFKVPNMYFKDIFIYHEGERFPYKFNI 458
PF KG P++ + + F L R N D+F+++ GE + + I
Sbjct: 833 PFTKKGN---PYKKAAFERLCIEFGLPRKPDFRWKGGRNHGLGDVFVFYPGEGYRNVYVI 889
Query: 459 PSYDTQSNVVPKN*I*ITDE 518
YDT ++ P + +DE
Sbjct: 890 RGYDTAADEYPSHLNLFSDE 909
>SB_2786| Best HMM Match : Pox_A32 (HMM E-Value=0.11)
Length = 1182
Score = 27.5 bits (58), Expect = 9.0
Identities = 20/80 (25%), Positives = 34/80 (42%)
Frame = +3
Query: 279 PFDNKGKDLAPFESFVLDNKPLGFPLDRPVVDALFKVPNMYFKDIFIYHEGERFPYKFNI 458
PF KG P++ + + F L R N D+F+++ G+R+ I
Sbjct: 43 PFTQKGN---PYKKAAFERLCIEFGLPRKPDFRWKGGRNQGLGDMFVFYPGDRYRNVHVI 99
Query: 459 PSYDTQSNVVPKN*I*ITDE 518
YDT ++ P + +DE
Sbjct: 100 RGYDTAADEYPSHLNLFSDE 119
>SB_1252| Best HMM Match : POPLD (HMM E-Value=1.9)
Length = 566
Score = 27.5 bits (58), Expect = 9.0
Identities = 21/80 (26%), Positives = 33/80 (41%)
Frame = +3
Query: 279 PFDNKGKDLAPFESFVLDNKPLGFPLDRPVVDALFKVPNMYFKDIFIYHEGERFPYKFNI 458
PF KG P++ + + F L R N D+F+++ GE + I
Sbjct: 414 PFTQKGN---PYKKAAFERLCIEFGLPRKPHFRWKGGRNHGLGDVFVFYPGEGYRNVHVI 470
Query: 459 PSYDTQSNVVPKN*I*ITDE 518
YDT ++ P + TDE
Sbjct: 471 RGYDTAADEYPSHLNLFTDE 490
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,010,345
Number of Sequences: 59808
Number of extensions: 393381
Number of successful extensions: 1291
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 1202
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1288
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1487884875
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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