Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0966
         (699 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         27   0.75 
AY645022-1|AAT92558.1|  165|Anopheles gambiae hairy protein.           24   5.3  
AY176049-1|AAO19580.1|  515|Anopheles gambiae cytochrome P450 CY...    23   9.2  
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    23   9.2  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    23   9.2  

>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 26.6 bits (56), Expect = 0.75
 Identities = 29/139 (20%), Positives = 48/139 (34%), Gaps = 2/139 (1%)
 Frame = +3

Query: 150 PHPGPLPKGARGKRWLGAVPSPLWGVRSGDIVNTCRGHGRHLQLRHKNPFMESLMPWDAR 329
           P   P+P  A G+ W     SP+ G  S   +++           H +          + 
Sbjct: 541 PGVAPVPALATGRGWSSPQASPVSGYDSSTSISSVCSGPEEDNASHSSASSHGSSDGPSS 600

Query: 330 DTMSLRTEFVLFASQDG--ANIRSLXRRFGISPATGYKWLQRWAQEGAAGLQDRPRIPHH 503
                R     F        + R++  ++ IS     KWLQ+  Q+         +  HH
Sbjct: 601 SEKLKRQAIDSFYHDVACRGDYRAVATKYNISRKYVEKWLQQEEQQQEDDHHHHQQ-HHH 659

Query: 504 SPTAHLTTSRPCCVWPMTV 560
              A +TT+    V P+ V
Sbjct: 660 HHHAEVTTAGSVRVSPLVV 678


>AY645022-1|AAT92558.1|  165|Anopheles gambiae hairy protein.
          Length = 165

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 13/41 (31%), Positives = 18/41 (43%)
 Frame = +1

Query: 391 VPSAVASAFHLPPATSGSSAGLRKVPPVFRTARAFRTIPQP 513
           +PS  AS        SGSS+   +VP    T+  +   P P
Sbjct: 38  IPSRTASTGSASSGHSGSSSLYDRVPREHATSSPYHAPPSP 78


>AY176049-1|AAO19580.1|  515|Anopheles gambiae cytochrome P450
           CYP12F3 protein.
          Length = 515

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 12/29 (41%), Positives = 14/29 (48%), Gaps = 2/29 (6%)
 Frame = +3

Query: 420 PATGYKWLQRWAQE--GAAGLQDRPRIPH 500
           PA   +WL RWA E  G   L  R  + H
Sbjct: 192 PADFNEWLSRWALETTGVLALDTRLGVLH 220


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
           FGF-signaling promoter protein.
          Length = 1197

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = -3

Query: 580 PGPPAFMTVMGHTQQGRDVVR 518
           PGPP    V G  +   DVVR
Sbjct: 713 PGPPDEKDVCGENEDNFDVVR 733


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +1

Query: 163 LSPKGRGGKDGSVQSPLPFGVYG 231
           + P+GR G+DG+   P P G  G
Sbjct: 769 VGPEGRPGRDGAPGLPGPKGEPG 791


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 849,213
Number of Sequences: 2352
Number of extensions: 20029
Number of successful extensions: 43
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)