Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0966
(699 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC053367-1|AAH53367.1| 240|Homo sapiens GATS protein protein. 33 1.3
BC033723-1|AAH33723.1| 243|Homo sapiens GATS protein protein. 33 1.3
U43342-1|AAC50887.1| 925|Homo sapiens transcription factor NFAT... 31 3.0
U43341-1|AAC50886.1| 921|Homo sapiens transcription factor NFAT... 31 3.0
AL132866-2|CAI23549.1| 921|Homo sapiens nuclear factor of activ... 31 3.0
AL132866-1|CAC00528.2| 925|Homo sapiens nuclear factor of activ... 31 3.0
AL035684-4|CAI19206.1| 921|Homo sapiens nuclear factor of activ... 31 3.0
AL035684-3|CAI19205.1| 925|Homo sapiens nuclear factor of activ... 31 3.0
AL035682-2|CAI18853.1| 921|Homo sapiens nuclear factor of activ... 31 3.0
AL035682-1|CAI18852.1| 925|Homo sapiens nuclear factor of activ... 31 3.0
BC026213-1|AAH26213.1| 529|Homo sapiens F-box and WD repeat dom... 31 4.0
AF176022-1|AAF04528.1| 542|Homo sapiens F-box protein Fbw1b pro... 31 4.0
AB033281-1|BAA92331.1| 542|Homo sapiens F-box and WD-repeats pr... 31 4.0
AB033280-1|BAA92330.1| 529|Homo sapiens F-box and WD-repeats pr... 31 4.0
AB033279-1|BAA92329.1| 508|Homo sapiens F-box and WD-repeats pr... 31 4.0
AB014596-1|BAA31671.1| 550|Homo sapiens KIAA0696 protein protein. 31 4.0
M23102-1|AAA36770.1| 790|Homo sapiens protein ( Human trk proto... 31 5.2
BC062580-1|AAH62580.1| 795|Homo sapiens NTRK1 protein protein. 31 5.2
AL158169-4|CAH70010.1| 790|Homo sapiens neurotrophic tyrosine k... 31 5.2
AB019488-1|BAA34355.1| 796|Homo sapiens TRKA protein. 31 5.2
U01147-1|AAC50063.1| 859|Homo sapiens guanine nucleotide regula... 30 6.9
BC130578-1|AAI30579.1| 1935|Homo sapiens ADAM metallopeptidase w... 30 6.9
AF488803-1|AAO15765.1| 1935|Homo sapiens a disintegrin-like and ... 30 6.9
AB037733-1|BAA92550.1| 1471|Homo sapiens KIAA1312 protein protein. 30 6.9
BC065530-1|AAH65530.1| 1003|Homo sapiens methyl-CpG binding doma... 30 9.1
AL022395-2|CAB37982.1| 443|Homo sapiens POU domain, class 3, tr... 30 9.1
AK056399-1|BAB71176.1| 1003|Homo sapiens protein ( Homo sapiens ... 30 9.1
AB067474-1|BAB67780.1| 967|Homo sapiens KIAA1887 protein protein. 30 9.1
>BC053367-1|AAH53367.1| 240|Homo sapiens GATS protein protein.
Length = 240
Score = 32.7 bits (71), Expect = 1.3
Identities = 23/52 (44%), Positives = 27/52 (51%)
Frame = +1
Query: 361 CSPRRTGRTSVPSAVASAFHLPPATSGSSAGLRKVPPVFRTARAFRTIPQPL 516
CSPRR R + P A LPP+T GS + L PP F AR+ R P L
Sbjct: 5 CSPRRHPRAAAPPA------LPPSTRGSPSQLGG-PPPFCPARSGRRRPPRL 49
>BC033723-1|AAH33723.1| 243|Homo sapiens GATS protein protein.
Length = 243
Score = 32.7 bits (71), Expect = 1.3
Identities = 23/52 (44%), Positives = 27/52 (51%)
Frame = +1
Query: 361 CSPRRTGRTSVPSAVASAFHLPPATSGSSAGLRKVPPVFRTARAFRTIPQPL 516
CSPRR R + P A LPP+T GS + L PP F AR+ R P L
Sbjct: 8 CSPRRHPRAAAPPA------LPPSTRGSPSQLGG-PPPFCPARSGRRRPPRL 52
>U43342-1|AAC50887.1| 925|Homo sapiens transcription factor NFAT1
isoform C protein.
Length = 925
Score = 31.5 bits (68), Expect = 3.0
Identities = 32/98 (32%), Positives = 42/98 (42%), Gaps = 17/98 (17%)
Frame = +1
Query: 310 LCPGMREIPCHYVLSLFCSPRRTGRTSVPSAVASAFHLP---PATSGSSAGLRK------ 462
LCP + IP HY S SP + RTS+ H P PA+ SS G ++
Sbjct: 201 LCPQFQNIPAHY--SPRTSPIMSPRTSLAEDSCLGRHSPVPRPASRSSSPGAKRRHSCAE 258
Query: 463 ----VPPVFRTARAFRTIPQP---LI*RHHG-PAAYGP 552
+PP R+ PQP + + HG PA Y P
Sbjct: 259 ALVALPPGASPQRSRSPSPQPSSHVAPQDHGSPAGYPP 296
>U43341-1|AAC50886.1| 921|Homo sapiens transcription factor NFAT1
isoform B protein.
Length = 921
Score = 31.5 bits (68), Expect = 3.0
Identities = 32/98 (32%), Positives = 42/98 (42%), Gaps = 17/98 (17%)
Frame = +1
Query: 310 LCPGMREIPCHYVLSLFCSPRRTGRTSVPSAVASAFHLP---PATSGSSAGLRK------ 462
LCP + IP HY S SP + RTS+ H P PA+ SS G ++
Sbjct: 201 LCPQFQNIPAHY--SPRTSPIMSPRTSLAEDSCLGRHSPVPRPASRSSSPGAKRRHSCAE 258
Query: 463 ----VPPVFRTARAFRTIPQP---LI*RHHG-PAAYGP 552
+PP R+ PQP + + HG PA Y P
Sbjct: 259 ALVALPPGASPQRSRSPSPQPSSHVAPQDHGSPAGYPP 296
>AL132866-2|CAI23549.1| 921|Homo sapiens nuclear factor of
activated T-cells, cytoplasmic,rate protein.
Length = 921
Score = 31.5 bits (68), Expect = 3.0
Identities = 32/98 (32%), Positives = 42/98 (42%), Gaps = 17/98 (17%)
Frame = +1
Query: 310 LCPGMREIPCHYVLSLFCSPRRTGRTSVPSAVASAFHLP---PATSGSSAGLRK------ 462
LCP + IP HY S SP + RTS+ H P PA+ SS G ++
Sbjct: 201 LCPQFQNIPAHY--SPRTSPIMSPRTSLAEDSCLGRHSPVPRPASRSSSPGAKRRHSCAE 258
Query: 463 ----VPPVFRTARAFRTIPQP---LI*RHHG-PAAYGP 552
+PP R+ PQP + + HG PA Y P
Sbjct: 259 ALVALPPGASPQRSRSPSPQPSSHVAPQDHGSPAGYPP 296
>AL132866-1|CAC00528.2| 925|Homo sapiens nuclear factor of
activated T-cells, cytoplasmic,in protein.
Length = 925
Score = 31.5 bits (68), Expect = 3.0
Identities = 32/98 (32%), Positives = 42/98 (42%), Gaps = 17/98 (17%)
Frame = +1
Query: 310 LCPGMREIPCHYVLSLFCSPRRTGRTSVPSAVASAFHLP---PATSGSSAGLRK------ 462
LCP + IP HY S SP + RTS+ H P PA+ SS G ++
Sbjct: 201 LCPQFQNIPAHY--SPRTSPIMSPRTSLAEDSCLGRHSPVPRPASRSSSPGAKRRHSCAE 258
Query: 463 ----VPPVFRTARAFRTIPQP---LI*RHHG-PAAYGP 552
+PP R+ PQP + + HG PA Y P
Sbjct: 259 ALVALPPGASPQRSRSPSPQPSSHVAPQDHGSPAGYPP 296
>AL035684-4|CAI19206.1| 921|Homo sapiens nuclear factor of
activated T-cells, cytoplasmic,r 1 protein.
Length = 921
Score = 31.5 bits (68), Expect = 3.0
Identities = 32/98 (32%), Positives = 42/98 (42%), Gaps = 17/98 (17%)
Frame = +1
Query: 310 LCPGMREIPCHYVLSLFCSPRRTGRTSVPSAVASAFHLP---PATSGSSAGLRK------ 462
LCP + IP HY S SP + RTS+ H P PA+ SS G ++
Sbjct: 201 LCPQFQNIPAHY--SPRTSPIMSPRTSLAEDSCLGRHSPVPRPASRSSSPGAKRRHSCAE 258
Query: 463 ----VPPVFRTARAFRTIPQP---LI*RHHG-PAAYGP 552
+PP R+ PQP + + HG PA Y P
Sbjct: 259 ALVALPPGASPQRSRSPSPQPSSHVAPQDHGSPAGYPP 296
>AL035684-3|CAI19205.1| 925|Homo sapiens nuclear factor of
activated T-cells, cytoplasmic,r 1 protein.
Length = 925
Score = 31.5 bits (68), Expect = 3.0
Identities = 32/98 (32%), Positives = 42/98 (42%), Gaps = 17/98 (17%)
Frame = +1
Query: 310 LCPGMREIPCHYVLSLFCSPRRTGRTSVPSAVASAFHLP---PATSGSSAGLRK------ 462
LCP + IP HY S SP + RTS+ H P PA+ SS G ++
Sbjct: 201 LCPQFQNIPAHY--SPRTSPIMSPRTSLAEDSCLGRHSPVPRPASRSSSPGAKRRHSCAE 258
Query: 463 ----VPPVFRTARAFRTIPQP---LI*RHHG-PAAYGP 552
+PP R+ PQP + + HG PA Y P
Sbjct: 259 ALVALPPGASPQRSRSPSPQPSSHVAPQDHGSPAGYPP 296
>AL035682-2|CAI18853.1| 921|Homo sapiens nuclear factor of
activated T-cells, cytoplasmic,adenine nucleotide
translocato protein.
Length = 921
Score = 31.5 bits (68), Expect = 3.0
Identities = 32/98 (32%), Positives = 42/98 (42%), Gaps = 17/98 (17%)
Frame = +1
Query: 310 LCPGMREIPCHYVLSLFCSPRRTGRTSVPSAVASAFHLP---PATSGSSAGLRK------ 462
LCP + IP HY S SP + RTS+ H P PA+ SS G ++
Sbjct: 201 LCPQFQNIPAHY--SPRTSPIMSPRTSLAEDSCLGRHSPVPRPASRSSSPGAKRRHSCAE 258
Query: 463 ----VPPVFRTARAFRTIPQP---LI*RHHG-PAAYGP 552
+PP R+ PQP + + HG PA Y P
Sbjct: 259 ALVALPPGASPQRSRSPSPQPSSHVAPQDHGSPAGYPP 296
>AL035682-1|CAI18852.1| 925|Homo sapiens nuclear factor of
activated T-cells, cytoplasmic,ide 1 protein.
Length = 925
Score = 31.5 bits (68), Expect = 3.0
Identities = 32/98 (32%), Positives = 42/98 (42%), Gaps = 17/98 (17%)
Frame = +1
Query: 310 LCPGMREIPCHYVLSLFCSPRRTGRTSVPSAVASAFHLP---PATSGSSAGLRK------ 462
LCP + IP HY S SP + RTS+ H P PA+ SS G ++
Sbjct: 201 LCPQFQNIPAHY--SPRTSPIMSPRTSLAEDSCLGRHSPVPRPASRSSSPGAKRRHSCAE 258
Query: 463 ----VPPVFRTARAFRTIPQP---LI*RHHG-PAAYGP 552
+PP R+ PQP + + HG PA Y P
Sbjct: 259 ALVALPPGASPQRSRSPSPQPSSHVAPQDHGSPAGYPP 296
>BC026213-1|AAH26213.1| 529|Homo sapiens F-box and WD repeat domain
containing 11 protein.
Length = 529
Score = 31.1 bits (67), Expect = 4.0
Identities = 21/87 (24%), Positives = 38/87 (43%), Gaps = 7/87 (8%)
Frame = +3
Query: 216 LWGVRSGDIVNTCRGHGRH-LQLRHKNPFM------ESLMPWDARDTMSLRTEFVLFASQ 374
+W V +G+++NT H L LR N M S+ WD + VL +
Sbjct: 291 VWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHR 350
Query: 375 DGANIRSLXRRFGISPATGYKWLQRWA 455
N+ ++ +S A+G + ++ W+
Sbjct: 351 AAVNVVDFDDKYIVS-ASGDRTIKVWS 376
>AF176022-1|AAF04528.1| 542|Homo sapiens F-box protein Fbw1b
protein.
Length = 542
Score = 31.1 bits (67), Expect = 4.0
Identities = 21/87 (24%), Positives = 38/87 (43%), Gaps = 7/87 (8%)
Frame = +3
Query: 216 LWGVRSGDIVNTCRGHGRH-LQLRHKNPFM------ESLMPWDARDTMSLRTEFVLFASQ 374
+W V +G+++NT H L LR N M S+ WD + VL +
Sbjct: 304 VWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHR 363
Query: 375 DGANIRSLXRRFGISPATGYKWLQRWA 455
N+ ++ +S A+G + ++ W+
Sbjct: 364 AAVNVVDFDDKYIVS-ASGDRTIKVWS 389
>AB033281-1|BAA92331.1| 542|Homo sapiens F-box and WD-repeats
protein beta-TRCP2 isoform C protein.
Length = 542
Score = 31.1 bits (67), Expect = 4.0
Identities = 21/87 (24%), Positives = 38/87 (43%), Gaps = 7/87 (8%)
Frame = +3
Query: 216 LWGVRSGDIVNTCRGHGRH-LQLRHKNPFM------ESLMPWDARDTMSLRTEFVLFASQ 374
+W V +G+++NT H L LR N M S+ WD + VL +
Sbjct: 304 VWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHR 363
Query: 375 DGANIRSLXRRFGISPATGYKWLQRWA 455
N+ ++ +S A+G + ++ W+
Sbjct: 364 AAVNVVDFDDKYIVS-ASGDRTIKVWS 389
>AB033280-1|BAA92330.1| 529|Homo sapiens F-box and WD-repeats
protein beta-TRCP2 isoform B protein.
Length = 529
Score = 31.1 bits (67), Expect = 4.0
Identities = 21/87 (24%), Positives = 38/87 (43%), Gaps = 7/87 (8%)
Frame = +3
Query: 216 LWGVRSGDIVNTCRGHGRH-LQLRHKNPFM------ESLMPWDARDTMSLRTEFVLFASQ 374
+W V +G+++NT H L LR N M S+ WD + VL +
Sbjct: 291 VWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHR 350
Query: 375 DGANIRSLXRRFGISPATGYKWLQRWA 455
N+ ++ +S A+G + ++ W+
Sbjct: 351 AAVNVVDFDDKYIVS-ASGDRTIKVWS 376
>AB033279-1|BAA92329.1| 508|Homo sapiens F-box and WD-repeats
protein beta-TRCP2 isoform A protein.
Length = 508
Score = 31.1 bits (67), Expect = 4.0
Identities = 21/87 (24%), Positives = 38/87 (43%), Gaps = 7/87 (8%)
Frame = +3
Query: 216 LWGVRSGDIVNTCRGHGRH-LQLRHKNPFM------ESLMPWDARDTMSLRTEFVLFASQ 374
+W V +G+++NT H L LR N M S+ WD + VL +
Sbjct: 270 VWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHR 329
Query: 375 DGANIRSLXRRFGISPATGYKWLQRWA 455
N+ ++ +S A+G + ++ W+
Sbjct: 330 AAVNVVDFDDKYIVS-ASGDRTIKVWS 355
>AB014596-1|BAA31671.1| 550|Homo sapiens KIAA0696 protein protein.
Length = 550
Score = 31.1 bits (67), Expect = 4.0
Identities = 21/87 (24%), Positives = 38/87 (43%), Gaps = 7/87 (8%)
Frame = +3
Query: 216 LWGVRSGDIVNTCRGHGRH-LQLRHKNPFM------ESLMPWDARDTMSLRTEFVLFASQ 374
+W V +G+++NT H L LR N M S+ WD + VL +
Sbjct: 312 VWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHR 371
Query: 375 DGANIRSLXRRFGISPATGYKWLQRWA 455
N+ ++ +S A+G + ++ W+
Sbjct: 372 AAVNVVDFDDKYIVS-ASGDRTIKVWS 397
>M23102-1|AAA36770.1| 790|Homo sapiens protein ( Human trk
proto-oncogene insert of pLM6. ).
Length = 790
Score = 30.7 bits (66), Expect = 5.2
Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +3
Query: 435 KWLQRWAQEGAAGLQDRPRIPH-HSPTAHL 521
+WLQRW +EG G+ ++ H P AH+
Sbjct: 157 RWLQRWEEEGLGGVPEQKLQCHGQGPLAHM 186
>BC062580-1|AAH62580.1| 795|Homo sapiens NTRK1 protein protein.
Length = 795
Score = 30.7 bits (66), Expect = 5.2
Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +3
Query: 435 KWLQRWAQEGAAGLQDRPRIPH-HSPTAHL 521
+WLQRW +EG G+ ++ H P AH+
Sbjct: 156 RWLQRWEEEGLGGVPEQKLQCHGQGPLAHM 185
>AL158169-4|CAH70010.1| 790|Homo sapiens neurotrophic tyrosine
kinase, receptor, type 1 protein.
Length = 790
Score = 30.7 bits (66), Expect = 5.2
Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +3
Query: 435 KWLQRWAQEGAAGLQDRPRIPH-HSPTAHL 521
+WLQRW +EG G+ ++ H P AH+
Sbjct: 157 RWLQRWEEEGLGGVPEQKLQCHGQGPLAHM 186
>AB019488-1|BAA34355.1| 796|Homo sapiens TRKA protein.
Length = 796
Score = 30.7 bits (66), Expect = 5.2
Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +3
Query: 435 KWLQRWAQEGAAGLQDRPRIPH-HSPTAHL 521
+WLQRW +EG G+ ++ H P AH+
Sbjct: 157 RWLQRWEEEGLGGVPEQKLQCHGQGPLAHM 186
>U01147-1|AAC50063.1| 859|Homo sapiens guanine nucleotide
regulatory protein protein.
Length = 859
Score = 30.3 bits (65), Expect = 6.9
Identities = 20/51 (39%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = -1
Query: 522 SDERLGNG-AECAGGPEDRRHLPEPSAGATCSRWQVKCRSDGXGNGCSPRP 373
+DE G G E G PE +P T S Q+ RS G G+G SP P
Sbjct: 26 TDEYDGEGNEEQKGPPEGSETMPYIDESPTMSP-QLSARSQGRGDGVSPTP 75
>BC130578-1|AAI30579.1| 1935|Homo sapiens ADAM metallopeptidase with
thrombospondin type 1 motif, 9 protein.
Length = 1935
Score = 30.3 bits (65), Expect = 6.9
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = +3
Query: 429 GYKWLQRWAQEGAAGLQDRPRIPHHSPTAHLTTSRP-CCVW 548
G+K Q W Q G L DR P PT+ T +P C W
Sbjct: 1071 GHKHRQVWCQFGEDRLNDRMCDPETKPTSMQTCQQPECASW 1111
>AF488803-1|AAO15765.1| 1935|Homo sapiens a disintegrin-like and
metalloprotease with thrombospondin type 1 motifs 9B
protein.
Length = 1935
Score = 30.3 bits (65), Expect = 6.9
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = +3
Query: 429 GYKWLQRWAQEGAAGLQDRPRIPHHSPTAHLTTSRP-CCVW 548
G+K Q W Q G L DR P PT+ T +P C W
Sbjct: 1071 GHKHRQVWCQFGEDRLNDRMCDPETKPTSMQTCQQPECASW 1111
>AB037733-1|BAA92550.1| 1471|Homo sapiens KIAA1312 protein protein.
Length = 1471
Score = 30.3 bits (65), Expect = 6.9
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = +3
Query: 429 GYKWLQRWAQEGAAGLQDRPRIPHHSPTAHLTTSRP-CCVW 548
G+K Q W Q G L DR P PT+ T +P C W
Sbjct: 913 GHKHRQVWCQFGEDRLNDRMCDPETKPTSMQTCQQPECASW 953
>BC065530-1|AAH65530.1| 1003|Homo sapiens methyl-CpG binding domain
protein 6 protein.
Length = 1003
Score = 29.9 bits (64), Expect = 9.1
Identities = 18/61 (29%), Positives = 29/61 (47%)
Frame = +3
Query: 402 RRFGISPATGYKWLQRWAQEGAAGLQDRPRIPHHSPTAHLTTSRPCCVWPMTVMNAGGPG 581
RR ++ AT Y+ ++ + G P++ H + PC V P T +N GGPG
Sbjct: 104 RRKAVAMATLYRSMETTCSHSSPGEGASPQMFHTVSPGPPSARPPCRVPPTTPLN-GGPG 162
Query: 582 T 584
+
Sbjct: 163 S 163
>AL022395-2|CAB37982.1| 443|Homo sapiens POU domain, class 3,
transcription factor 2 protein.
Length = 443
Score = 29.9 bits (64), Expect = 9.1
Identities = 16/45 (35%), Positives = 20/45 (44%)
Frame = +1
Query: 400 AVASAFHLPPATSGSSAGLRKVPPVFRTARAFRTIPQPLI*RHHG 534
+ A+A HLPP+ S+ GL P F QP HHG
Sbjct: 170 SAAAAAHLPPSMGASNGGLLYSQPSFTVNGMLGAGGQPAGLHHHG 214
>AK056399-1|BAB71176.1| 1003|Homo sapiens protein ( Homo sapiens
cDNA FLJ31837 fis, clone NT2RP7000069, weakly similar to
MUCIN 1 PRECURSOR. ).
Length = 1003
Score = 29.9 bits (64), Expect = 9.1
Identities = 18/61 (29%), Positives = 29/61 (47%)
Frame = +3
Query: 402 RRFGISPATGYKWLQRWAQEGAAGLQDRPRIPHHSPTAHLTTSRPCCVWPMTVMNAGGPG 581
RR ++ AT Y+ ++ + G P++ H + PC V P T +N GGPG
Sbjct: 104 RRKAVAMATLYRSMETTCSHSSPGEGASPQMFHTVSPGPPSARPPCRVPPTTPLN-GGPG 162
Query: 582 T 584
+
Sbjct: 163 S 163
>AB067474-1|BAB67780.1| 967|Homo sapiens KIAA1887 protein protein.
Length = 967
Score = 29.9 bits (64), Expect = 9.1
Identities = 18/61 (29%), Positives = 29/61 (47%)
Frame = +3
Query: 402 RRFGISPATGYKWLQRWAQEGAAGLQDRPRIPHHSPTAHLTTSRPCCVWPMTVMNAGGPG 581
RR ++ AT Y+ ++ + G P++ H + PC V P T +N GGPG
Sbjct: 68 RRKAVAMATLYRSMETTCSHSSPGEGASPQMFHTVSPGPPSARPPCRVPPTTPLN-GGPG 126
Query: 582 T 584
+
Sbjct: 127 S 127
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,768,977
Number of Sequences: 237096
Number of extensions: 3575974
Number of successful extensions: 17820
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 16345
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17811
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8063224416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -