Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0965
         (689 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT004470-1|AAO42634.1| 1248|Drosophila melanogaster SD07139p pro...    31   1.9  
AE014297-2960|AAF55869.3| 1251|Drosophila melanogaster CG5874-PA...    31   1.9  
BT015200-1|AAT94429.1| 1112|Drosophila melanogaster RE70805p pro...    29   6.0  
AY069683-1|AAL39828.1|  993|Drosophila melanogaster LD45449p pro...    29   6.0  
AF132166-1|AAD34754.2| 1112|Drosophila melanogaster LD21334p pro...    29   6.0  
AE014298-2035|AAF48374.1|  993|Drosophila melanogaster CG9411-PA...    29   6.0  

>BT004470-1|AAO42634.1| 1248|Drosophila melanogaster SD07139p
           protein.
          Length = 1248

 Score = 30.7 bits (66), Expect = 1.9
 Identities = 17/46 (36%), Positives = 26/46 (56%)
 Frame = +2

Query: 176 QSPTAGHRPLPIHTTEPGLRLSSSTFAATVRRTALPSQGASHVTSS 313
           Q+P   H PL I+++ P + L+SS  A   +  ALPS   S  T++
Sbjct: 593 QAPQQSHPPLLINSSTPVI-LASSPSAQRAKALALPSSSTSATTTT 637


>AE014297-2960|AAF55869.3| 1251|Drosophila melanogaster CG5874-PA
           protein.
          Length = 1251

 Score = 30.7 bits (66), Expect = 1.9
 Identities = 17/46 (36%), Positives = 26/46 (56%)
 Frame = +2

Query: 176 QSPTAGHRPLPIHTTEPGLRLSSSTFAATVRRTALPSQGASHVTSS 313
           Q+P   H PL I+++ P + L+SS  A   +  ALPS   S  T++
Sbjct: 596 QAPQQSHPPLLINSSTPVI-LASSPSAQRAKALALPSSSTSATTTT 640


>BT015200-1|AAT94429.1| 1112|Drosophila melanogaster RE70805p
           protein.
          Length = 1112

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
 Frame = +3

Query: 555 SPMDFSNVRGRAKPLPTAK-YPISAETEENTYYGHKQIM 668
           S +DF  +  R +P   A  YP + + ++  Y+GHK+I+
Sbjct: 523 SMLDFDFICRRDEPSVVAMVYPFTGDHKQKYYWGHKEIL 561


>AY069683-1|AAL39828.1|  993|Drosophila melanogaster LD45449p
           protein.
          Length = 993

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 13/44 (29%), Positives = 21/44 (47%)
 Frame = +3

Query: 531 PPDGEWLPSPMDFSNVRGRAKPLPTAKYPISAETEENTYYGHKQ 662
           PP+ ++LP P   +NVR    P P  +  + A      +Y  +Q
Sbjct: 648 PPEPQYLPPPPPLANVRPLGPPPPPTQQYLPAAPSGPLFYQQQQ 691


>AF132166-1|AAD34754.2| 1112|Drosophila melanogaster LD21334p
           protein.
          Length = 1112

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
 Frame = +3

Query: 555 SPMDFSNVRGRAKPLPTAK-YPISAETEENTYYGHKQIM 668
           S +DF  +  R +P   A  YP + + ++  Y+GHK+I+
Sbjct: 523 SMLDFDFICRRDEPSVVAMVYPFTGDHKQKYYWGHKEIL 561


>AE014298-2035|AAF48374.1|  993|Drosophila melanogaster CG9411-PA
           protein.
          Length = 993

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 13/44 (29%), Positives = 21/44 (47%)
 Frame = +3

Query: 531 PPDGEWLPSPMDFSNVRGRAKPLPTAKYPISAETEENTYYGHKQ 662
           PP+ ++LP P   +NVR    P P  +  + A      +Y  +Q
Sbjct: 648 PPEPQYLPPPPPLANVRPLGPPPPPTQQYLPAAPSGPLFYQQQQ 691


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,121,152
Number of Sequences: 53049
Number of extensions: 723979
Number of successful extensions: 1874
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1802
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1874
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3005453946
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)