Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0961
         (670 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    27   0.18 
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    27   0.18 
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    24   1.3  
EF532798-1|ABQ08060.1|   50|Tribolium castaneum acetylcholineste...    22   4.0  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   6.9  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   6.9  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    21   9.1  

>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 26.6 bits (56), Expect = 0.18
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +2

Query: 587 FRIISHEAIACPALLKGRSHDITI 658
           FR+I+  A  CPA L  + HD+T+
Sbjct: 346 FRMINSFASVCPAQLTIQGHDLTL 369


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 26.6 bits (56), Expect = 0.18
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +2

Query: 587 FRIISHEAIACPALLKGRSHDITI 658
           FR+I+  A  CPA L  + HD+T+
Sbjct: 346 FRMINSFASVCPAQLTIQGHDLTL 369


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = -2

Query: 519 F*LNYDRLYSNINXFIIHSKHSVHVFLLRC 430
           F L+  R+Y  +   II + H    FL RC
Sbjct: 654 FALHKFRIYIQVTKIIIRTDHQALKFLSRC 683


>EF532798-1|ABQ08060.1|   50|Tribolium castaneum
           acetylcholinesterase protein.
          Length = 50

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -1

Query: 601 TNNPESCQYQSVWIHQ 554
           TN  E C Y ++W+ Q
Sbjct: 7   TNISEDCLYLNIWVPQ 22


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -1

Query: 598 NNPESCQYQSVWIHQ 554
           N   SC+Y  VWI +
Sbjct: 187 NEDYSCEYNLVWIKE 201


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 6/16 (37%), Positives = 13/16 (81%)
 Frame = -3

Query: 347  KIVIARYIYHVSKFIL 300
            ++V+ARY+Y+ + F +
Sbjct: 1210 RMVVARYVYYATIFTI 1225


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = +2

Query: 347 WIMYHFTLYNPHNDQSKKAS*D 412
           W+  H T   P  DQ K+ + D
Sbjct: 352 WLFQHLTHPYPSEDQKKQLAQD 373


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,190
Number of Sequences: 336
Number of extensions: 2701
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17385535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)