Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0960
(664 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory recept... 26 0.24
AY337337-2|AAP94193.1| 491|Tribolium castaneum cytochrome P450 ... 23 3.0
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 22 3.9
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 22 3.9
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 22 3.9
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 22 3.9
DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulati... 21 6.8
AM292366-1|CAL23178.2| 379|Tribolium castaneum gustatory recept... 21 9.0
AM292329-1|CAL23141.2| 379|Tribolium castaneum gustatory recept... 21 9.0
>AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory receptor
candidate 19 protein.
Length = 355
Score = 26.2 bits (55), Expect = 0.24
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +1
Query: 499 VYLSTHACILFIVKLLFLTSVVKLRID*ILFVFVKYFY 612
VY +A I+F V LLFL + + + + YFY
Sbjct: 113 VYYFYYAFIIFTVHLLFLLCIYYFVVPLFFLLCIYYFY 150
Score = 26.2 bits (55), Expect = 0.24
Identities = 14/53 (26%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +1
Query: 490 LHTVYLSTHACILFI--VKLLFLTSVVKLRID*ILFVFVKYFYSVVLAKFCDY 642
L TV+L CI + + LLF + + + + + + YFY ++ C Y
Sbjct: 247 LFTVHLLLLVCIYYFYYMHLLFCCAFIIFTMHLLFLLCIYYFYCALIILLCIY 299
Score = 24.2 bits (50), Expect = 0.97
Identities = 21/82 (25%), Positives = 33/82 (40%), Gaps = 8/82 (9%)
Frame = +1
Query: 430 IFF*IMYKRYIKSIKKTLHTLHT---VYLSTHACIL-----FIVKLLFLTSVVKLRID*I 585
+F +Y + I T+H L ++ + H L F + LLFL + I
Sbjct: 161 LFLLCIYHFFCAFIIFTMHLLFCCAFIFFNMHLLFLLCLDYFTLHLLFLPCIYYFYSAFI 220
Query: 586 LFVFVKYFYSVVLAKFCDYRRY 651
+F FY V++ C Y Y
Sbjct: 221 IFTIHLLFYCVLIILLCIYYFY 242
Score = 21.8 bits (44), Expect = 5.2
Identities = 14/65 (21%), Positives = 25/65 (38%)
Frame = +1
Query: 457 YIKSIKKTLHTLHTVYLSTHACILFIVKLLFLTSVVKLRID*ILFVFVKYFYSVVLAKFC 636
Y I T+H L Y +A I+ + F + + + + + + YF + C
Sbjct: 86 YCPFIIFTVHFLLCTYYFYYAFIILLCVYYFYYAFIIFTVHLLFLLCIYYFVVPLFFLLC 145
Query: 637 DYRRY 651
Y Y
Sbjct: 146 IYYFY 150
Score = 21.8 bits (44), Expect = 5.2
Identities = 10/48 (20%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Frame = -1
Query: 529 IVCMRVCSNTRYVVCVMFS---LLI*CIFYTLFKKKY*HCALLLYILY 395
++ + +C Y ++F+ LL+ CI+Y + CA +++ ++
Sbjct: 231 VLIILLCIYYFYYAFILFTVHLLLLVCIYYFYYMHLLFCCAFIIFTMH 278
>AY337337-2|AAP94193.1| 491|Tribolium castaneum cytochrome P450
monooxygenase protein.
Length = 491
Score = 22.6 bits (46), Expect = 3.0
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +1
Query: 391 TYREYREEVHNANIFF*IMYKRYIKSIKKTLHT 489
TYR R +HN I+ R + + K+LH+
Sbjct: 211 TYRAPRPWIHNETIYSLTPQGRKEQKVLKSLHS 243
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 22.2 bits (45), Expect = 3.9
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = +1
Query: 499 VYLSTHACILFIVKLLFLTSV 561
+++S C+LF V +LF+ V
Sbjct: 300 MFVSVWKCLLFFVSVLFILLV 320
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 22.2 bits (45), Expect = 3.9
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = +1
Query: 499 VYLSTHACILFIVKLLFLTSV 561
+++S C+LF V +LF+ V
Sbjct: 300 MFVSVWKCLLFFVSVLFILLV 320
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 22.2 bits (45), Expect = 3.9
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = +1
Query: 499 VYLSTHACILFIVKLLFLTSV 561
+++S C+LF V +LF+ V
Sbjct: 300 MFVSVWKCLLFFVSVLFILLV 320
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 22.2 bits (45), Expect = 3.9
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = +1
Query: 499 VYLSTHACILFIVKLLFLTSV 561
+++S C+LF V +LF+ V
Sbjct: 300 MFVSVWKCLLFFVSVLFILLV 320
>DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulation
protein.
Length = 947
Score = 21.4 bits (43), Expect = 6.8
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = +1
Query: 7 EVSRLKTYFENTSFTDLINSSDGWEN*FSRITP 105
++ LKT +NT+F L++ S +TP
Sbjct: 439 QIENLKTTPDNTTFITLVDVSTKRRTELEDLTP 471
>AM292366-1|CAL23178.2| 379|Tribolium castaneum gustatory receptor
candidate 45 protein.
Length = 379
Score = 21.0 bits (42), Expect = 9.0
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +1
Query: 520 CILFIVKLLFLTSVVKLRI 576
C+L++V L FLT + L I
Sbjct: 175 CVLYVVLLHFLTYNLSLGI 193
>AM292329-1|CAL23141.2| 379|Tribolium castaneum gustatory receptor
candidate 8 protein.
Length = 379
Score = 21.0 bits (42), Expect = 9.0
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +1
Query: 520 CILFIVKLLFLTSVVKLRI 576
C+L++V L FLT + L I
Sbjct: 175 CVLYVVLLHFLTYNLSLGI 193
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,194
Number of Sequences: 336
Number of extensions: 2928
Number of successful extensions: 15
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17177325
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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