Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0959
(693 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4Y0Q1 Cluster: Putative uncharacterized protein; n=1; ... 41 0.033
UniRef50_A0CAD6 Cluster: Chromosome undetermined scaffold_161, w... 40 0.076
UniRef50_Q9YVQ5 Cluster: ORF MSV187 putative late transcription ... 38 0.18
UniRef50_Q7RHE8 Cluster: Phosphatidylinositol 4-kinase-related; ... 36 0.94
UniRef50_Q25802 Cluster: RpoD protein; n=2; Plasmodium|Rep: RpoD... 36 1.2
UniRef50_Q6YA78 Cluster: Reticulocyte binding-like protein 3; n=... 34 2.9
UniRef50_A2G4T1 Cluster: Putative uncharacterized protein; n=1; ... 34 3.8
UniRef50_Q30R33 Cluster: Diguanylate cyclase; n=1; Thiomicrospir... 33 5.0
UniRef50_Q7RT69 Cluster: Streptococcus pyogenes AMV258, putative... 33 5.0
UniRef50_A2AX81 Cluster: Gustatory receptor candidate 19; n=1; T... 33 5.0
UniRef50_O58313 Cluster: Putative uncharacterized protein PH0604... 33 5.0
UniRef50_Q73N67 Cluster: CAAX amino terminal protease family pro... 33 8.8
>UniRef50_Q4Y0Q1 Cluster: Putative uncharacterized protein; n=1;
Plasmodium chabaudi|Rep: Putative uncharacterized
protein - Plasmodium chabaudi
Length = 69
Score = 40.7 bits (91), Expect = 0.033
Identities = 18/43 (41%), Positives = 25/43 (58%)
Frame = +3
Query: 9 VNIYFNMFYLFIICYKYVFRYFLVTTNYFLFNAYCASAIYELK 137
VNI NM+Y++I Y Y+F FLVTTN+ L + + K
Sbjct: 26 VNILLNMYYIYIYLYAYLFVNFLVTTNFRLLYILLIGSFLQFK 68
>UniRef50_A0CAD6 Cluster: Chromosome undetermined scaffold_161,
whole genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_161,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 384
Score = 39.5 bits (88), Expect = 0.076
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Frame = -2
Query: 686 VSRCDIFPKINKNKTFNMKRKVMKTIKNILLFHFSIKQI*SHHEIYLKANVYEQYGYRYH 507
+SRC FP +NK K + +M+++K I L + +I QI +I+ + QY +
Sbjct: 194 ISRC--FPSVNKMKNYRKVNLLMRSLKKIKLLNLTIPQI-MKQQIFQRTAFASQYSKEFI 250
Query: 506 FEIK-NKKNDFLN*IQS 459
F K N N N +Q+
Sbjct: 251 FAAKQNNINQIQNLLQT 267
>UniRef50_Q9YVQ5 Cluster: ORF MSV187 putative late transcription
factor VLTF-2 homolog (Vaccinia A1L), similar to
SW:P33814; n=1; Melanoplus sanguinipes
entomopoxvirus|Rep: ORF MSV187 putative late
transcription factor VLTF-2 homolog (Vaccinia A1L),
similar to SW:P33814 - Melanoplus sanguinipes
entomopoxvirus (MsEPV)
Length = 261
Score = 38.3 bits (85), Expect = 0.18
Identities = 21/60 (35%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Frame = -2
Query: 656 NKNKTFNMKRKVMKTI--KNILLFH-FSIKQI*SHHEIYLKANVYEQYGYRYHFEIKNKK 486
N + +N+ +K+ K I KN++LF ++ +QI S+ +I LK N + Y+++FE K K
Sbjct: 106 NSKEDYNVIKKIFKNIDYKNLILFSKYNNEQIISNFKIILKNNKIWHFTYKFNFETKINK 165
>UniRef50_Q7RHE8 Cluster: Phosphatidylinositol 4-kinase-related;
n=13; Apicomplexa|Rep: Phosphatidylinositol
4-kinase-related - Plasmodium yoelii yoelii
Length = 1654
Score = 35.9 bits (79), Expect = 0.94
Identities = 23/87 (26%), Positives = 40/87 (45%)
Frame = -2
Query: 683 SRCDIFPKINKNKTFNMKRKVMKTIKNILLFHFSIKQI*SHHEIYLKANVYEQYGYRYHF 504
++C+ P+ N N N + N+L I S ++ L N+YEQ Y+Y+
Sbjct: 70 NKCEALPEHNCNTHANKSDNICIQNSNVLKCEEIQNNIDS--KLSLSTNLYEQ-NYKYNT 126
Query: 503 EIKNKKNDFLN*IQSTVNLNRPIKTNS 423
+ + D N + +LN P+K N+
Sbjct: 127 NLYEQNMDDCNIVDIKYDLNNPVKKNN 153
>UniRef50_Q25802 Cluster: RpoD protein; n=2; Plasmodium|Rep: RpoD
protein - Plasmodium falciparum
Length = 960
Score = 35.5 bits (78), Expect = 1.2
Identities = 20/70 (28%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Frame = -2
Query: 680 RCD-IFPKINKNKTFNMKRKVMKTIKNILLFH-FSIKQ--I*SHHEIYLKANVYEQYGYR 513
+C+ I+ I+KN +N+ ++K + N++ ++ +S Q I + H ++ N+Y Y Y
Sbjct: 408 KCNFIYNSISKNFKYNLNNIIIKYLNNVIKYYNYSNIQLLIKNIHNKWILYNIYTYYLYY 467
Query: 512 YHFEIKNKKN 483
YH + N N
Sbjct: 468 YHIKFYNLYN 477
>UniRef50_Q6YA78 Cluster: Reticulocyte binding-like protein 3; n=2;
Plasmodium (Laverania)|Rep: Reticulocyte binding-like
protein 3 - Plasmodium reichenowi
Length = 2881
Score = 34.3 bits (75), Expect = 2.9
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Frame = -2
Query: 671 IFPKINKNKTFNMKRKVMKTIKNILLFHFSIKQI*-SHHEIYLKANVYEQYGYRYHFEIK 495
I INKN T + ++ K NIL + + S +++ K N+Y +Y Y EI+
Sbjct: 2425 ILNNINKNFTLDTIKEFNKAYDNILFHMRDLYDLEESKYDVRRKLNIYIEYIY----EIR 2480
Query: 494 NKKNDFLN 471
NK N+ +N
Sbjct: 2481 NKSNNLIN 2488
>UniRef50_A2G4T1 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 573
Score = 33.9 bits (74), Expect = 3.8
Identities = 17/60 (28%), Positives = 33/60 (55%)
Frame = -2
Query: 659 INKNKTFNMKRKVMKTIKNILLFHFSIKQI*SHHEIYLKANVYEQYGYRYHFEIKNKKND 480
I ++K K+K++K +K+ + F +K S +Y K + Y++ YRY F+ + K +
Sbjct: 463 IERHKVVINKKKIVKDLKSKVEF-LQLKNSKSIASLYRKKDEYDELNYRYKFDTRFKMTE 521
>UniRef50_Q30R33 Cluster: Diguanylate cyclase; n=1; Thiomicrospira
denitrificans ATCC 33889|Rep: Diguanylate cyclase -
Thiomicrospira denitrificans (strain ATCC 33889 / DSM
1351)
Length = 318
Score = 33.5 bits (73), Expect = 5.0
Identities = 15/42 (35%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +1
Query: 196 QVLRYVAE-FTLLMSMGSDDR*HQVVGELVHYLSNKNCRY*G 318
++ RY E FT++++ SDD+ Q+ L+H +S+ N Y G
Sbjct: 230 KIFRYGGEEFTIVINRNSDDQCEQIANRLLHLISSNNLIYMG 271
>UniRef50_Q7RT69 Cluster: Streptococcus pyogenes AMV258, putative;
n=4; Plasmodium (Vinckeia)|Rep: Streptococcus pyogenes
AMV258, putative - Plasmodium yoelii yoelii
Length = 784
Score = 33.5 bits (73), Expect = 5.0
Identities = 21/70 (30%), Positives = 33/70 (47%)
Frame = -2
Query: 689 KVSRCDIFPKINKNKTFNMKRKVMKTIKNILLFHFSIKQI*SHHEIYLKANVYEQYGYRY 510
K S CD++ +I+ N +M +K I NI L I E Y+ N+Y +
Sbjct: 387 KTSTCDLYMQIHLNLLKDMLKK-NDFINNIFLLEKLENNIMIKEEEYIYKNMYTHIFSSF 445
Query: 509 HFEIKNKKND 480
F +KN +N+
Sbjct: 446 FFNLKNLQNN 455
>UniRef50_A2AX81 Cluster: Gustatory receptor candidate 19; n=1;
Tribolium castaneum|Rep: Gustatory receptor candidate 19
- Tribolium castaneum (Red flour beetle)
Length = 355
Score = 33.5 bits (73), Expect = 5.0
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = +3
Query: 18 YFNMFYLFIICYKYVFRYFLVTTNYFLFNAYCASAIYELKTITIISIVR 164
YF + ++C Y R F++ +F YCA ++Y LK+ +++VR
Sbjct: 287 YFYCALIILLCIYYFCRAFIIFPTHF----YCAFSLYPLKSTFYLNVVR 331
>UniRef50_O58313 Cluster: Putative uncharacterized protein PH0604;
n=1; Pyrococcus horikoshii|Rep: Putative uncharacterized
protein PH0604 - Pyrococcus horikoshii
Length = 164
Score = 33.5 bits (73), Expect = 5.0
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +3
Query: 36 LFIICYKYVFRYFLVTTNYFLFNAYCASAIYELKTITII 152
L ++C+ ++++Y LV+ Y LF YC + + + II
Sbjct: 126 LILLCWSFLYKYILVSLTYTLFALYCWMNVQDKQNSIII 164
>UniRef50_Q73N67 Cluster: CAAX amino terminal protease family
protein; n=3; Treponema denticola|Rep: CAAX amino
terminal protease family protein - Treponema denticola
Length = 292
Score = 32.7 bits (71), Expect = 8.8
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = +3
Query: 24 NMFYLFIICYKYVFRYFLVTTNYFLFNAYCASAIYELK 137
N F++F+ +KYV+ YFL+ + +F A AI E+K
Sbjct: 235 NNFFIFL--FKYVYFYFLIVIYFIIFIAGIIMAIQEIK 270
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 579,478,937
Number of Sequences: 1657284
Number of extensions: 11121770
Number of successful extensions: 24464
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 23208
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24411
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54545459628
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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