Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0957
         (678 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_01_0139 - 1008675-1008752,1008828-1008905,1009176-1009227,100...    28   6.0  
06_02_0020 - 10675108-10676101,10676204-10676865,10676981-10677322     28   7.9  

>02_01_0139 -
           1008675-1008752,1008828-1008905,1009176-1009227,
           1009369-1009437,1009594-1009652,1009757-1009828,
           1009945-1010038,1010311-1010356,1010510-1010609,
           1010847-1011200,1011362-1011460,1011548-1011595,
           1011679-1011816
          Length = 428

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = -1

Query: 330 HRSLLNNIAMLIIKKSTDKL*NHQYCYSNSNKTW 229
           H ++L  I  ++I+   DK   HQ+ Y +  KTW
Sbjct: 291 HYNVLEQILAVLIQFVKDKKLEHQHQYDDLKKTW 324


>06_02_0020 - 10675108-10676101,10676204-10676865,10676981-10677322
          Length = 665

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -1

Query: 81  TCKHINSTYYVTSKCITGLICLNIL 7
           +C+H ++T Y  S   T LIC+ IL
Sbjct: 292 SCRHSDTTIYALSLVATVLICIGIL 316


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,368,445
Number of Sequences: 37544
Number of extensions: 189846
Number of successful extensions: 287
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 260
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 287
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1726796312
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)