Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0955
         (697 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    24   1.4  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   2.4  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   4.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   7.3  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   9.6  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    21   9.6  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   9.6  

>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 9/23 (39%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
 Frame = +3

Query: 630 VCTLIN-VFRHIFVVGCISWFST 695
           VC  +N +F  I ++GC+  F+T
Sbjct: 526 VCDSVNRIFGFIIIIGCLIQFNT 548



 Score = 21.4 bits (43), Expect = 7.3
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -1

Query: 67  WCCQRPWVRPVSCLGW 20
           +C     +RP+S LGW
Sbjct: 555 YCYYSISIRPISTLGW 570


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +3

Query: 183 RWSCSTITGPRCPSATGSCASTAAL 257
           R S  ++  PRCPS     +  AAL
Sbjct: 87  RESSDSLVQPRCPSGESMLSERAAL 111


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +3

Query: 351 RMTVCVCQGNHNTRRS 398
           R+  CVC G+  TRR+
Sbjct: 916 RVVRCVCAGSTGTRRA 931


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 10/23 (43%), Positives = 11/23 (47%)
 Frame = +2

Query: 209  PTLPLGNRELREYGGTSDITNCT 277
            P L   N ELR       +TNCT
Sbjct: 2678 PLLKTLNNELRGTPSDISVTNCT 2700


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = +1

Query: 565 LGSRILSTIAQCALIVM*HKHLY 633
           +G R    + QC L +   +HLY
Sbjct: 142 IGQRSCQVVIQCYLEIKIDEHLY 164


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 15/49 (30%), Positives = 20/49 (40%)
 Frame = +2

Query: 5   PAKLLPTKTAYWTYPGSLTTPPCTESVIWLLFKEPVQVSAEQLSLMRKL 151
           P +  PTK  Y     +   PP TE    +      Q ++ QLS M  L
Sbjct: 437 PTENSPTKPYYKLKTANNKRPPSTELGTNIYTSSKRQRTSPQLSPMSSL 485


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -2

Query: 96  RSQITDSVHGGVVK 55
           R +I D++H GVV+
Sbjct: 312 RDRIYDAIHSGVVR 325


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,215
Number of Sequences: 336
Number of extensions: 4193
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)