Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0955
(697 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41539-1|AAB52498.1| 246|Caenorhabditis elegans Carbonic anhydr... 69 2e-12
U39743-2|AAA80437.6| 310|Caenorhabditis elegans Carbonic anhydr... 61 6e-10
Z68118-4|CAD18873.1| 235|Caenorhabditis elegans Hypothetical pr... 55 4e-08
Z68118-3|CAA92190.2| 280|Caenorhabditis elegans Hypothetical pr... 55 4e-08
U23517-10|AAB93341.3| 337|Caenorhabditis elegans Carbonic anhyd... 52 5e-07
U12966-4|AAA20616.1| 365|Caenorhabditis elegans Carbonic anhydr... 46 2e-05
AF000198-1|AAB53054.1| 319|Caenorhabditis elegans Carbonic anhy... 41 7e-04
Z82082-4|CAE45093.1| 210|Caenorhabditis elegans Hypothetical pr... 33 0.26
Z74034-4|CAE17842.2| 319|Caenorhabditis elegans Hypothetical pr... 31 0.60
U23147-7|AAC46691.1| 596|Caenorhabditis elegans Rapsyn protein ... 31 0.60
U28971-8|AAD31046.2| 767|Caenorhabditis elegans Related to isle... 31 0.79
AJ245560-1|CAB52188.1| 767|Caenorhabditis elegans IDA-1 protein... 31 0.79
AF126740-1|AAK14908.1| 767|Caenorhabditis elegans IA2 protein. 31 0.79
U39999-7|AAY44012.1| 232|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z82058-3|CAB04866.1| 349|Caenorhabditis elegans Hypothetical pr... 28 5.5
AF047657-3|AAK18947.2| 326|Caenorhabditis elegans Serpentine re... 28 5.5
AL132898-3|CAC14412.1| 346|Caenorhabditis elegans Hypothetical ... 28 7.3
>U41539-1|AAB52498.1| 246|Caenorhabditis elegans Carbonic anhydrase
protein 3 protein.
Length = 246
Score = 69.3 bits (162), Expect = 2e-12
Identities = 33/76 (43%), Positives = 47/76 (61%)
Frame = +2
Query: 11 KLLPTKTAYWTYPGSLTTPPCTESVIWLLFKEPVQVSAEQLSLMRKLKCGEASCGVEAME 190
KL K ++W Y GSLTTPPC+E V W +F EPV V+ +QL L R+++ +E
Sbjct: 171 KLPANKRSFWRYEGSLTTPPCSEIVTWTIFTEPVTVTHDQLELFRQVQ------DIEKRP 224
Query: 191 LLHNYRPTLPLGNREL 238
+ NYRPT L +R++
Sbjct: 225 IKKNYRPTQNLNDRKI 240
>U39743-2|AAA80437.6| 310|Caenorhabditis elegans Carbonic anhydrase
protein 5 protein.
Length = 310
Score = 61.3 bits (142), Expect = 6e-10
Identities = 32/77 (41%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Frame = +2
Query: 14 LLPTKT-AYWTYPGSLTTPPCTESVIWLLFKEPVQVSAEQLSLMRKLKCGEASCGVEAME 190
+LP T A++ Y GSLTTP C+E+VIW + EP+ +S+ QL L+R+L E ++
Sbjct: 207 VLPLDTEAFYRYEGSLTTPDCSEAVIWTVLAEPMAISSHQLHLLRQLH------NKELVK 260
Query: 191 LLHNYRPTLPLGNRELR 241
NYRP PL R ++
Sbjct: 261 SDKNYRPLQPLNGRRIQ 277
>Z68118-4|CAD18873.1| 235|Caenorhabditis elegans Hypothetical
protein R01E6.3b protein.
Length = 235
Score = 55.2 bits (127), Expect = 4e-08
Identities = 25/44 (56%), Positives = 31/44 (70%)
Frame = +2
Query: 20 PTKTAYWTYPGSLTTPPCTESVIWLLFKEPVQVSAEQLSLMRKL 151
P K + TY GSLTTPP E VIW LF EPV+VS QL+++R +
Sbjct: 170 PDKREFVTYLGSLTTPPYNECVIWTLFTEPVEVSFGQLNVLRNI 213
>Z68118-3|CAA92190.2| 280|Caenorhabditis elegans Hypothetical
protein R01E6.3a protein.
Length = 280
Score = 55.2 bits (127), Expect = 4e-08
Identities = 25/44 (56%), Positives = 31/44 (70%)
Frame = +2
Query: 20 PTKTAYWTYPGSLTTPPCTESVIWLLFKEPVQVSAEQLSLMRKL 151
P K + TY GSLTTPP E VIW LF EPV+VS QL+++R +
Sbjct: 215 PDKREFVTYLGSLTTPPYNECVIWTLFTEPVEVSFGQLNVLRNI 258
>U23517-10|AAB93341.3| 337|Caenorhabditis elegans Carbonic
anhydrase protein 2 protein.
Length = 337
Score = 51.6 bits (118), Expect = 5e-07
Identities = 26/79 (32%), Positives = 41/79 (51%)
Frame = +2
Query: 5 PAKLLPTKTAYWTYPGSLTTPPCTESVIWLLFKEPVQVSAEQLSLMRKLKCGEASCGVEA 184
P+ LLP + Y TY GSLT P C E+V W++ P+ ++ + L + +++ E E
Sbjct: 194 PSALLPKTSHYVTYEGSLTFPGCHETVTWVILNNPIYITNDDLQIWNEMQKTETK-QPEP 252
Query: 185 MELLHNYRPTLPLGNRELR 241
+ YRP L R +R
Sbjct: 253 SYMTPAYRPLKSLNGRLVR 271
>U12966-4|AAA20616.1| 365|Caenorhabditis elegans Carbonic anhydrase
protein 1 protein.
Length = 365
Score = 46.4 bits (105), Expect = 2e-05
Identities = 25/80 (31%), Positives = 38/80 (47%)
Frame = +2
Query: 2 DPAKLLPTKTAYWTYPGSLTTPPCTESVIWLLFKEPVQVSAEQLSLMRKLKCGEASCGVE 181
+P +LLP TY GSLT+P C E+V W++ +P+ + E L G E
Sbjct: 276 EPWRLLPFTRDIITYEGSLTSPGCHETVTWIILNQPIFIKKEHFEEWSHLYLSME--GAE 333
Query: 182 AMELLHNYRPTLPLGNRELR 241
+ + N+R NR +R
Sbjct: 334 KVPVAPNFRKIQETNNRLVR 353
>AF000198-1|AAB53054.1| 319|Caenorhabditis elegans Carbonic
anhydrase protein 6 protein.
Length = 319
Score = 41.1 bits (92), Expect = 7e-04
Identities = 15/42 (35%), Positives = 27/42 (64%)
Frame = +2
Query: 35 YWTYPGSLTTPPCTESVIWLLFKEPVQVSAEQLSLMRKLKCG 160
+W Y GS TT P E+V W++ + + +S+ QL +R+++ G
Sbjct: 235 FWMYEGSETTDPFRETVNWIVIRAALPISSHQLDKLREVRAG 276
>Z82082-4|CAE45093.1| 210|Caenorhabditis elegans Hypothetical
protein ZC334.7 protein.
Length = 210
Score = 32.7 bits (71), Expect = 0.26
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = -2
Query: 432 FANYLPRAFYIMTFAYCGYLDKRKQSYANMSYKLLMCLVDPQRARYL 292
+ Y P ++Y GY++++ + Y M Y L+ C V QRA++L
Sbjct: 90 YGGYRPNPPQPFGYSYVGYINRQARRYPVMMYTLIQC-VPCQRAKHL 135
>Z74034-4|CAE17842.2| 319|Caenorhabditis elegans Hypothetical
protein F43A11.3 protein.
Length = 319
Score = 31.5 bits (68), Expect = 0.60
Identities = 18/48 (37%), Positives = 27/48 (56%)
Frame = -2
Query: 531 IFSPALQKWTGSLGTFLQIRLNYKLNLVTDHVWFANYLPRAFYIMTFA 388
IFS AL+ W +L L + Y++ LV + +FA + P+ FY FA
Sbjct: 84 IFSQALESWNINLSMSLYLGNEYQIILVALNRFFALFFPQ-FYSKIFA 130
>U23147-7|AAC46691.1| 596|Caenorhabditis elegans Rapsyn protein 1
protein.
Length = 596
Score = 31.5 bits (68), Expect = 0.60
Identities = 19/59 (32%), Positives = 24/59 (40%)
Frame = +3
Query: 162 KRHAALRRWSCSTITGPRCPSATGSCASTAALAISQTAH*LTSSSNGLVVGPPNTLTTC 338
++ AA S + P PS T SCAS L S T+ T S+ PP C
Sbjct: 502 QQSAAANACSAVAVPSPEVPSTTASCASEPILTASTTSQSHTHSNANHKPPPPPRKPCC 560
>U28971-8|AAD31046.2| 767|Caenorhabditis elegans Related to islet
cell diabetesautoantigen protein 1 protein.
Length = 767
Score = 31.1 bits (67), Expect = 0.79
Identities = 9/22 (40%), Positives = 19/22 (86%)
Frame = -2
Query: 465 YKLNLVTDHVWFANYLPRAFYI 400
++++LV++H+W +YL R+FY+
Sbjct: 622 FEIHLVSEHIWSDDYLVRSFYL 643
>AJ245560-1|CAB52188.1| 767|Caenorhabditis elegans IDA-1 protein
protein.
Length = 767
Score = 31.1 bits (67), Expect = 0.79
Identities = 9/22 (40%), Positives = 19/22 (86%)
Frame = -2
Query: 465 YKLNLVTDHVWFANYLPRAFYI 400
++++LV++H+W +YL R+FY+
Sbjct: 622 FEIHLVSEHIWSDDYLVRSFYL 643
>AF126740-1|AAK14908.1| 767|Caenorhabditis elegans IA2 protein.
Length = 767
Score = 31.1 bits (67), Expect = 0.79
Identities = 9/22 (40%), Positives = 19/22 (86%)
Frame = -2
Query: 465 YKLNLVTDHVWFANYLPRAFYI 400
++++LV++H+W +YL R+FY+
Sbjct: 622 FEIHLVSEHIWSDDYLVRSFYL 643
>U39999-7|AAY44012.1| 232|Caenorhabditis elegans Hypothetical
protein F41G3.20 protein.
Length = 232
Score = 29.1 bits (62), Expect = 3.2
Identities = 25/90 (27%), Positives = 39/90 (43%), Gaps = 2/90 (2%)
Frame = +3
Query: 198 TITGPRCPSATGSCASTAA--LAISQTAH*LTSSSNGLVVGPPNTLTTCMTYWRMTVCVC 371
T+ +CP G C S++A + S T LT++S G V P + C +T+
Sbjct: 111 TLMKQQCPKTCGYCTSSSATTTSSSSTCIDLTNASTG-VSDCPGMASYCTNSAYLTLMKQ 169
Query: 372 QGNHNTRRSLYKTPEANSSRTKHDLLQDSI 461
Q + ++SS T DL+ SI
Sbjct: 170 QCPKTCGYCTSSSSSSSSSSTCADLVNSSI 199
>Z82058-3|CAB04866.1| 349|Caenorhabditis elegans Hypothetical
protein T27C5.5 protein.
Length = 349
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +2
Query: 503 VHFCSAGLNIFIINISIQRYL*DLV 577
+HFCSA L++FI S Q YL +V
Sbjct: 55 LHFCSAFLDLFIAIFSTQYYLVPIV 79
>AF047657-3|AAK18947.2| 326|Caenorhabditis elegans Serpentine
receptor, class h protein272 protein.
Length = 326
Score = 28.3 bits (60), Expect = 5.5
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -2
Query: 402 IMTFAYCGYLDKRKQSYANMSYKLLMC 322
++ FAY Y D Q+Y N+S+ ++ C
Sbjct: 252 LLYFAYSVYFDSYNQAYNNISFIIISC 278
>AL132898-3|CAC14412.1| 346|Caenorhabditis elegans Hypothetical
protein Y59A8B.4 protein.
Length = 346
Score = 27.9 bits (59), Expect = 7.3
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +2
Query: 503 VHFCSAGLNIFIINISIQRYL 565
+HFCSA L++F+ +S Q YL
Sbjct: 55 MHFCSAFLDLFLSALSTQYYL 75
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,130,891
Number of Sequences: 27780
Number of extensions: 375529
Number of successful extensions: 980
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 918
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 978
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1602927856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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