Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0953
         (654 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            27   0.52 
DQ989011-1|ABK97612.1|  467|Anopheles gambiae gustatory receptor...    24   3.7  
AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           23   6.4  

>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 27.1 bits (57), Expect = 0.52
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +1

Query: 79  WDIPDGFLCP 108
           W +PDGF+CP
Sbjct: 165 WSVPDGFICP 174


>DQ989011-1|ABK97612.1|  467|Anopheles gambiae gustatory receptor 22
           protein.
          Length = 467

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 12/43 (27%), Positives = 19/43 (44%), Gaps = 3/43 (6%)
 Frame = +3

Query: 396 VSRITIHWPSF---YNVVTGKTLALPNLIALQHIPLFASWRIA 515
           V++    W  F   Y +VTGK +  P L  +       SW ++
Sbjct: 172 VAKFKNMWTDFQYKYLIVTGKPIVFPKLYPITWTLCIVSWSLS 214


>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 23.4 bits (48), Expect = 6.4
 Identities = 12/40 (30%), Positives = 19/40 (47%)
 Frame = +2

Query: 452 PGVTQLNRLAAHPPFRQLANSEEARTDRPSQQLRTXMANG 571
           PG+   N L A P  +Q    + ++  +PS Q    + NG
Sbjct: 270 PGMVN-NGLRAPPSSQQQPQQQPSQQPQPSSQSNAQLTNG 308


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 710,482
Number of Sequences: 2352
Number of extensions: 16148
Number of successful extensions: 21
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64814025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)