Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0952
(683 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g60790.1 68418.m07627 ABC transporter family protein similar ... 124 6e-29
At3g54540.1 68416.m06035 ABC transporter family protein similar ... 70 2e-12
At1g64550.1 68414.m07317 ABC transporter family protein similar ... 54 9e-08
At5g09930.1 68418.m01148 ABC transporter family protein 42 5e-04
At5g64840.1 68418.m08157 ABC transporter family protein 41 7e-04
At5g02270.1 68418.m00150 ABC transporter family protein NBD-like... 38 0.006
At4g01830.1 68417.m00240 multidrug resistance P-glycoprotein, pu... 34 0.076
At1g02520.1 68414.m00203 multidrug resistance P-glycoprotein, pu... 34 0.076
At1g02530.1 68414.m00204 multidrug resistance P-glycoprotein, pu... 34 0.10
At4g01820.1 68417.m00239 multidrug resistance P-glycoprotein, pu... 33 0.23
At3g62150.1 68416.m06983 multidrug resistant (MDR) ABC transport... 33 0.23
At2g47000.1 68415.m05871 multidrug resistant (MDR) ABC transport... 33 0.23
At2g36910.1 68415.m04527 multidrug resistance P-glycoprotein (PG... 33 0.23
At3g13090.1 68416.m01639 ABC transporter, putative similar to MR... 32 0.31
At3g13100.1 68416.m01640 ABC transporter family protein similar ... 32 0.41
At1g03905.1 68414.m00375 ABC transporter family protein similar ... 32 0.41
At5g44110.1 68418.m05397 ABC transporter family protein 31 0.54
At4g33460.1 68417.m04753 ABC transporter family protein ABC-type... 31 0.94
At3g59140.1 68416.m06593 ABC transporter family protein putative... 30 1.2
At2g41700.1 68415.m05151 ABC transporter family protein similar ... 30 1.2
At1g07620.1 68414.m00817 GTP1/OBG family protein similar to SP|P... 30 1.6
At1g04120.1 68414.m00401 ABC transporter family protein Strong s... 30 1.6
At3g28860.1 68416.m03602 multidrug resistance P-glycoprotein, pu... 29 2.2
At3g28380.1 68416.m03546 P-glycoprotein, putative similar to P-g... 29 2.2
At5g10930.1 68418.m01268 CBL-interacting protein kinase 5 (CIPK5... 29 2.9
At5g46540.1 68418.m05730 ABC transporter family protein contains... 29 3.8
At5g25110.1 68418.m02975 CBL-interacting protein kinase 25 (CIPK... 29 3.8
At4g25450.1 68417.m03665 ABC transporter family protein similar ... 29 3.8
At4g29900.1 68417.m04254 calcium-transporting ATPase, plasma mem... 28 5.0
At3g28415.1 68416.m03551 P-glycoprotein, putative contains ATP-b... 28 5.0
At3g28390.1 68416.m03547 P-glycoprotein, putative similar to P-g... 28 5.0
At1g53390.1 68414.m06052 ABC transporter family protein similar ... 28 5.0
At5g60760.1 68418.m07623 2-phosphoglycerate kinase-related conta... 28 6.6
At3g62700.1 68416.m07043 glutathione-conjugate transporter, puta... 28 6.6
At3g45090.2 68416.m04862 2-phosphoglycerate kinase-related conta... 28 6.6
At3g45090.1 68416.m04863 2-phosphoglycerate kinase-related conta... 28 6.6
At5g13610.1 68418.m01576 expressed protein 27 8.8
At4g18050.1 68417.m02686 ABC transporter family protein contains... 27 8.8
At3g28360.1 68416.m03544 ABC transporter family protein similar ... 27 8.8
At3g28345.1 68416.m03541 ABC transporter family protein similar ... 27 8.8
At2g34660.1 68415.m04258 glutathione S-conjugate ABC transporter... 27 8.8
At1g30400.1 68414.m03716 glutathione S-conjugate ABC transporter... 27 8.8
>At5g60790.1 68418.m07627 ABC transporter family protein similar to
ABC transporter homolog PnATH GI:7573600 from [Populus
nigra]
Length = 595
Score = 124 bits (299), Expect = 6e-29
Identities = 52/83 (62%), Positives = 71/83 (85%)
Frame = +1
Query: 259 CTGSLAVHPRSRDIKIANFSITFYGSELLQDTLLELNCGRRYGLVGLNGCGKSSLLAALG 438
CTG L HP+SRDI+I + S+TF+G +L+ D++LELN GRRYGL+GLNGCGKS+LL A+G
Sbjct: 56 CTGVLCSHPQSRDIRIESLSVTFHGYDLIVDSMLELNYGRRYGLLGLNGCGKSTLLTAIG 115
Query: 439 RREVPIPEHIDIFHLTREMPASD 507
RRE+PIP+ +DI+HL+ E+ A+D
Sbjct: 116 RREIPIPDQMDIYHLSHEIEATD 138
Score = 49.6 bits (113), Expect = 2e-06
Identities = 23/51 (45%), Positives = 36/51 (70%)
Frame = +3
Query: 510 TALQCVMEVDEERVKLEKLAEMLAHCEDDESQEQLMDVYDRLDDLSADTAE 662
++L+ V+ DEER++LEK E+L +DD E+L +Y+RLD + A+TAE
Sbjct: 140 SSLEAVVSCDEERLRLEKEVEILVQ-QDDGGGERLQSIYERLDAMDAETAE 189
>At3g54540.1 68416.m06035 ABC transporter family protein similar to
ABC50 GI:10863747 from [Rattus norvegicus]
Length = 723
Score = 69.7 bits (163), Expect = 2e-12
Identities = 30/78 (38%), Positives = 54/78 (69%)
Frame = +1
Query: 292 RDIKIANFSITFYGSELLQDTLLELNCGRRYGLVGLNGCGKSSLLAALGRREVPIPEHID 471
+DI I +FS++ G ELL++ + ++ G+RYGL+G NG GKS+LL L R++P+P++ID
Sbjct: 161 KDITIESFSVSARGKELLKNASVRISHGKRYGLIGPNGMGKSTLLKLLAWRKIPVPKNID 220
Query: 472 IFHLTREMPASDRLHFSA 525
+ + +E+ ++ +A
Sbjct: 221 VLLVEQEVVGDEKSALNA 238
Score = 34.7 bits (76), Expect = 0.058
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 12/63 (19%)
Frame = +3
Query: 510 TALQCVMEVDEERVKLEKLAEMLAHC------------EDDESQEQLMDVYDRLDDLSAD 653
+AL V+ +EE VKL + AE L +DD++ E+L ++YDRL L +D
Sbjct: 234 SALNAVVSANEELVKLREEAEALQKSSSGADGENVDGEDDDDTGEKLAELYDRLQILGSD 293
Query: 654 TAE 662
AE
Sbjct: 294 AAE 296
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +1
Query: 364 LNCGRRYGLVGLNGCGKSSLLAALGRREVP 453
++ G R +VG NG GKS+LL L VP
Sbjct: 520 IDMGTRVAIVGPNGAGKSTLLNLLAGDLVP 549
>At1g64550.1 68414.m07317 ABC transporter family protein similar to
ABC transporter protein GB:AAF31030 GI:6899653 from
[Leishmania major]
Length = 715
Score = 54.0 bits (124), Expect = 9e-08
Identities = 26/69 (37%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Frame = +1
Query: 292 RDIKIANFSITFYGSELLQDTLLELNCGRRYGLVGLNGCGKSSLLAALGRREVP-IPEHI 468
RDI + NF+++ G +L+ D + L+ GR YGLVG NG GK++ L + + IP +
Sbjct: 173 RDIHMDNFNVSVGGRDLIVDGSITLSFGRHYGLVGRNGTGKTTFLRYMAMHAIEGIPTNC 232
Query: 469 DIFHLTREM 495
I H+ +E+
Sbjct: 233 QILHVEQEV 241
Score = 29.1 bits (62), Expect = 2.9
Identities = 25/70 (35%), Positives = 34/70 (48%), Gaps = 19/70 (27%)
Frame = +3
Query: 510 TALQCVMEVDEERVK-LEKLAEMLAH------------------CEDDESQEQLMDVYDR 632
TALQCV+ D ER K LE+ ++LA E D ++L ++Y R
Sbjct: 247 TALQCVLNTDIERTKLLEEEIQILAKQRETEEPTAKDGMPTKDTVEGDLMSQRLEEIYKR 306
Query: 633 LDDLSADTAE 662
LD + A TAE
Sbjct: 307 LDAIDAYTAE 316
>At5g09930.1 68418.m01148 ABC transporter family protein
Length = 678
Score = 41.5 bits (93), Expect = 5e-04
Identities = 18/55 (32%), Positives = 33/55 (60%)
Frame = +1
Query: 289 SRDIKIANFSITFYGSELLQDTLLELNCGRRYGLVGLNGCGKSSLLAALGRREVP 453
S +++ N S ++ G +L+D E+ G + GL+G+NG GK++ L + +E P
Sbjct: 81 SSGVRLENISKSYEGITVLKDVTWEVKKGEKVGLIGVNGAGKTTQLRIITGQEEP 135
Score = 33.1 bits (72), Expect = 0.18
Identities = 16/53 (30%), Positives = 25/53 (47%)
Frame = +1
Query: 298 IKIANFSITFYGSELLQDTLLELNCGRRYGLVGLNGCGKSSLLAALGRREVPI 456
+ + N F L L + G + ++G NGCGKS+LL + E P+
Sbjct: 411 VTVKNLVFGFDDKMLFNKANLAIERGEKVAIIGPNGCGKSTLLKLIMGLEKPM 463
>At5g64840.1 68418.m08157 ABC transporter family protein
Length = 692
Score = 41.1 bits (92), Expect = 7e-04
Identities = 19/55 (34%), Positives = 32/55 (58%)
Frame = +1
Query: 289 SRDIKIANFSITFYGSELLQDTLLELNCGRRYGLVGLNGCGKSSLLAALGRREVP 453
S +K+ N ++ G +L+D E+ G + GLVG+NG GK++ L + +E P
Sbjct: 95 SSGVKLENIRKSYKGVTVLKDVTWEVKRGEKVGLVGVNGAGKTTQLRIITGQEEP 149
Score = 35.5 bits (78), Expect = 0.033
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +1
Query: 298 IKIANFSITFYGSELLQDTLLELNCGRRYGLVGLNGCGKSSLLAALGRREVPI 456
+ + N F L + L + G + ++G NGCGKS+LL + E P+
Sbjct: 425 VNVKNIDFGFEDKMLFKKANLSIERGEKIAILGPNGCGKSTLLKLIMGLEKPV 477
>At5g02270.1 68418.m00150 ABC transporter family protein NBD-like
protein POP, Arabidopsis thaliana, EMBL:AF127664
Length = 328
Score = 37.9 bits (84), Expect = 0.006
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 5/70 (7%)
Frame = +1
Query: 340 LLQDTLLELNCGRRYGLVGLNGCGKSSLLAALGRREVPIPEHIDI-----FHLTREMPAS 504
L++D + LN R LVG NG GK+++L LG + + P + + FH T +
Sbjct: 37 LIEDFSITLNSSDRCLLVGSNGAGKTTILKILGGKHMVEPHMVRVLGRSAFHDTGLTSSG 96
Query: 505 DRLHFSASWR 534
D + WR
Sbjct: 97 DLCYLGGEWR 106
>At4g01830.1 68417.m00240 multidrug resistance P-glycoprotein,
putative similar to multidrug resistant P-glycoprotein
GI:4204793 from [Solanum tuberosum]
Length = 1230
Score = 34.3 bits (75), Expect = 0.076
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Frame = +1
Query: 295 DIKIANFSITFYGS---ELLQDTLLELNCGRRYGLVGLNGCGKSSLLAALGRREVPIPEH 465
DI++ + S T+ ++ +D L + G+ LVG +G GKS++++ L R P H
Sbjct: 984 DIELCHISFTYQTRPDVQVFRDLCLSIRAGQTVALVGESGSGKSTVISLLQRFYDPDSGH 1043
Query: 466 IDI 474
I +
Sbjct: 1044 ITL 1046
>At1g02520.1 68414.m00203 multidrug resistance P-glycoprotein,
putative similar to multidrug-resistant protein CjMDR1
GI:14715462 from [Coptis japonica]
Length = 1278
Score = 34.3 bits (75), Expect = 0.076
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Frame = +1
Query: 295 DIKIANFSITFYGS---ELLQDTLLELNCGRRYGLVGLNGCGKSSLLAALGRREVPIPEH 465
DI++ + S T+ ++ +D L + G+ LVG +G GKS++++ L R P H
Sbjct: 1031 DIELRHLSFTYPARPDIQIFRDLCLTIRAGKTVALVGESGSGKSTVISLLQRFYDPDSGH 1090
Query: 466 IDI 474
I +
Sbjct: 1091 ITL 1093
>At1g02530.1 68414.m00204 multidrug resistance P-glycoprotein,
putative similar to multidrug-resistant protein CjMDR1
GI:14715462 from [Coptis japonica]
Length = 1273
Score = 33.9 bits (74), Expect = 0.10
Identities = 17/52 (32%), Positives = 31/52 (59%), Gaps = 3/52 (5%)
Frame = +1
Query: 295 DIKIANFSITFY---GSELLQDTLLELNCGRRYGLVGLNGCGKSSLLAALGR 441
DI++ + S T+ G ++ +D L + G+ LVG +G GKS++++ L R
Sbjct: 1026 DIELRHLSFTYPARPGIQIFRDLCLTIRAGKTVALVGESGSGKSTVISLLQR 1077
>At4g01820.1 68417.m00239 multidrug resistance P-glycoprotein,
putative similar to multidrug-resistant protein CjMDR1
GI:14715462 from [Coptis japonica]
Length = 1229
Score = 32.7 bits (71), Expect = 0.23
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Frame = +1
Query: 295 DIKIANFSITFYGS---ELLQDTLLELNCGRRYGLVGLNGCGKSSLLAALGRREVPIPEH 465
DI++ + S T+ ++ +D + G+ LVG +G GKS++++ L R P H
Sbjct: 983 DIELCHISFTYQTRPDVQIFRDLCFAIRAGQTVALVGESGSGKSTVISLLQRFYDPDSGH 1042
Query: 466 IDI 474
I +
Sbjct: 1043 ITL 1045
>At3g62150.1 68416.m06983 multidrug resistant (MDR) ABC transporter,
putative similar to multidrug-resistant protein CjMDR1
GI:14715462 from [Coptis japonica]; contains Pfam
profiles PF00005: ABC transporter, PF00664: ABC
transporter transmembrane region
Length = 1292
Score = 32.7 bits (71), Expect = 0.23
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +1
Query: 337 ELLQDTLLELNCGRRYGLVGLNGCGKSSLLAALGR 441
++ QD L + G+ LVG +G GKS+++A L R
Sbjct: 1064 QIFQDLCLSIRAGKTIALVGESGSGKSTVIALLQR 1098
>At2g47000.1 68415.m05871 multidrug resistant (MDR) ABC transporter,
putative similar to multidrug-resistant protein CjMDR1
[Coptis japonica] GI:14715462, MDR-like p-glycoprotein
[Arabidopsis thaliana] GI:24324262; contains Pfam
profiles PF00005: ABC transporter, PF00664: ABC
transporter transmembrane region
Length = 1286
Score = 32.7 bits (71), Expect = 0.23
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +1
Query: 337 ELLQDTLLELNCGRRYGLVGLNGCGKSSLLAALGR 441
++ QD L + G+ LVG +G GKS+++A L R
Sbjct: 1058 QIFQDLCLSIRAGKTVALVGESGSGKSTVIALLQR 1092
>At2g36910.1 68415.m04527 multidrug resistance P-glycoprotein (PGP1)
identical to P-glycoprotein GI:3849833 from [Arabidopsis
thaliana]; homologous to mammalian mdr gene,contains
ATP-binding cassette; related to multi drug resistance
proteins
Length = 1286
Score = 32.7 bits (71), Expect = 0.23
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +1
Query: 337 ELLQDTLLELNCGRRYGLVGLNGCGKSSLLAALGR 441
++ +D L G+ LVG +GCGKSS+++ + R
Sbjct: 1040 QIFRDLSLRARAGKTLALVGPSGCGKSSVISLIQR 1074
>At3g13090.1 68416.m01639 ABC transporter, putative similar to
MRP-like ABC transporter [Arabidopsis thaliana]
GI:2316016; contains Pfam profile: PF00005 ABC
transporter
Length = 1466
Score = 32.3 bits (70), Expect = 0.31
Identities = 25/68 (36%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
Frame = +1
Query: 283 PRSRDIKIANFSITFYGSELLQDTLLELNC----GRRYGLVGLNGCGKSSLLAALGRREV 450
P +I I N + YG L L L C G + G+VG GCGKS+L+ L R
Sbjct: 1214 PSRGEITICNLQVR-YGPHLPM-VLHGLTCTFPGGLKTGIVGRTGCGKSTLIQTLFRIVE 1271
Query: 451 PIPEHIDI 474
P I I
Sbjct: 1272 PAAGEIRI 1279
>At3g13100.1 68416.m01640 ABC transporter family protein similar to
ATP-binding cassette transporter MRP8 GI:18031899 from
[Arabidopsis thaliana]; contains Pfam profile: PF00005
ABC transporter
Length = 1493
Score = 31.9 bits (69), Expect = 0.41
Identities = 25/68 (36%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
Frame = +1
Query: 283 PRSRDIKIANFSITFYGSELLQDTLLELNC----GRRYGLVGLNGCGKSSLLAALGRREV 450
P +I I N + YG L L L C G + G+VG GCGKS+L+ L R
Sbjct: 1236 PCRGEITICNLQVR-YGPHLPM-VLRGLTCTFRGGLKTGIVGRTGCGKSTLIQTLFRIVE 1293
Query: 451 PIPEHIDI 474
P I I
Sbjct: 1294 PAAGEIRI 1301
>At1g03905.1 68414.m00375 ABC transporter family protein similar to
NBD-like protein GB:AAD20643
Length = 290
Score = 31.9 bits (69), Expect = 0.41
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 6/70 (8%)
Frame = +1
Query: 349 DTLLELNCGRRYGLVGLNGCGKSSLLAALGRREVPIPEHI------DIFHLTREMPASDR 510
D L+L G R LVG NG GK++LL L + + +++ FH T+ + + D
Sbjct: 32 DFNLDLPAGSRCLLVGANGSGKTTLLKILAGKHMVGGKNVVQVLSRSAFHDTQLVCSGDL 91
Query: 511 LHFSASWRLT 540
+ SW T
Sbjct: 92 SYLGGSWSKT 101
>At5g44110.1 68418.m05397 ABC transporter family protein
Length = 282
Score = 31.5 bits (68), Expect = 0.54
Identities = 24/71 (33%), Positives = 33/71 (46%), Gaps = 7/71 (9%)
Frame = +1
Query: 349 DTLLELNCGRRYGLVGLNGCGKSSLLAAL-------GRREVPIPEHIDIFHLTREMPASD 507
D L+L G R LVG NG GK++LL L G+ V + + FH T + + D
Sbjct: 31 DFNLDLPAGSRCLLVGANGSGKTTLLKILAGKHMVGGKNVVQVLDR-SAFHDTELVCSGD 89
Query: 508 RLHFSASWRLT 540
+ SW T
Sbjct: 90 LSYLGGSWSKT 100
>At4g33460.1 68417.m04753 ABC transporter family protein ABC-type
transport protein sll1623 -Synechocystis,PIR2:S74812
Length = 271
Score = 30.7 bits (66), Expect = 0.94
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +1
Query: 340 LLQDTLLELNCGRRYGLVGLNGCGKSSLLAAL 435
+L+D + G+ + ++G NGCGKS+LL L
Sbjct: 59 ILRDCSFRIPSGQLWMILGPNGCGKSTLLKIL 90
>At3g59140.1 68416.m06593 ABC transporter family protein putative
multi resistance protein mrp - Arabidopsis thaliana,
EMBL:ATMRPPROT
Length = 1453
Score = 30.3 bits (65), Expect = 1.2
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Frame = +1
Query: 298 IKIANFSITFYGSEL--LQDTLLELNCGRRYGLVGLNGCGKSSLLAAL 435
IK A+FS GS L++ LE+ G + + G G GKS+LLAA+
Sbjct: 603 IKSASFSWEEKGSTKPNLRNVSLEVKFGEKVAVCGEVGSGKSTLLAAI 650
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +1
Query: 373 GRRYGLVGLNGCGKSSLLAALGRREVPI 456
G + G+VG G GK++L++AL R P+
Sbjct: 1234 GHKIGIVGRTGSGKTTLISALFRLVEPV 1261
>At2g41700.1 68415.m05151 ABC transporter family protein similar to
ATP-binding cassette transporter ABCA1 GI:18031705 from
[Arabidopsis thaliana]
Length = 1822
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +1
Query: 343 LQDTLLELNCGRRYGLVGLNGCGKSSLLAALGRREVP 453
+Q + G +G +G NG GK++ L+ L E P
Sbjct: 1414 VQSLTFSVQAGECFGFLGTNGAGKTTTLSMLSGEETP 1450
>At1g07620.1 68414.m00817 GTP1/OBG family protein similar to
SP|P20964 Spo0B-associated GTP-binding protein {Bacillus
subtilis}; contains Pfam profile PF01018: GTP1/OBG
family
Length = 1016
Score = 29.9 bits (64), Expect = 1.6
Identities = 18/37 (48%), Positives = 22/37 (59%)
Frame = +1
Query: 331 GSELLQDTLLELNCGRRYGLVGLNGCGKSSLLAALGR 441
GSE + +LEL GLVG+ GKS+LL AL R
Sbjct: 814 GSEAV--LILELKSIADVGLVGMPNAGKSTLLGALSR 848
>At1g04120.1 68414.m00401 ABC transporter family protein Strong
similarity to MRP-like ABC transporter gb|U92650 from A.
thaliana and canalicular multi-drug resistance protein
gb|L49379 from Rattus norvegicus
Length = 1514
Score = 29.9 bits (64), Expect = 1.6
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Frame = +1
Query: 283 PRSRDIKIANFSITFYGSELLQDTLLELNC----GRRYGLVGLNGCGKSSLLAALGRREV 450
P + I++ + + + +E L L ++C G++ G+VG G GKS+L+ AL R
Sbjct: 1263 PATGTIELVDVKVRY--AENLPTVLHGVSCVFPGGKKIGIVGRTGSGKSTLIQALFRLIE 1320
Query: 451 PIPEHIDI 474
P I I
Sbjct: 1321 PTAGKITI 1328
>At3g28860.1 68416.m03602 multidrug resistance P-glycoprotein,
putative similar to mdr-like P-glycoprotein GI:3849833
from [Arabidopsis thaliana]; contains Pfam profiles
PF00005: ABC transporter and PF00664: ABC transporter
transmembrane region; identical to cDNA MDR-like
p-glycoprotein (At3g28860) GI:24324261
Length = 1252
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +1
Query: 340 LLQDTLLELNCGRRYGLVGLNGCGKSSLLAALGRREVPI 456
+ +D L + G LVG +G GKSS++A + R P+
Sbjct: 1027 VFRDFNLRIRAGHSQALVGASGSGKSSVIAMIERFYDPL 1065
>At3g28380.1 68416.m03546 P-glycoprotein, putative similar to
P-glycoprotein homologue GI:2292907 from [Hordeum
vulgare subsp. vulgare]
Length = 1240
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +1
Query: 340 LLQDTLLELNCGRRYGLVGLNGCGKSSLLAALGRREVPIPEHI 468
+ D L++ G+ LVG +G GKS++++ L R PI I
Sbjct: 376 IFDDLCLKIPAGKTVALVGGSGSGKSTVISLLQRFYDPIAGEI 418
>At5g10930.1 68418.m01268 CBL-interacting protein kinase 5 (CIPK5)
identical to CBL-interacting protein kinase 5
GP|9280632|gb|AAF86504 [Arabidopsis thaliana]
Length = 445
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +1
Query: 295 DIKIANFSITFYGSELLQDTLLELNCG 375
D+KI++F ++ ++LQD LL CG
Sbjct: 148 DLKISDFGLSALPEQILQDGLLHTQCG 174
>At5g46540.1 68418.m05730 ABC transporter family protein contains Pfam
profile: PF00005 ABC transporter; similar to
multidrug-resistant protein CjMDR1 GI:14715462 from
[Coptis japonica]
Length = 1248
Score = 28.7 bits (61), Expect = 3.8
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +1
Query: 337 ELLQDTLLELNCGRRYGLVGLNGCGKSSLLAALGR 441
++ D L ++ G+ LVG +G GKS++++ L R
Sbjct: 1021 QIFSDLCLTISSGQTVALVGESGSGKSTVISLLER 1055
>At5g25110.1 68418.m02975 CBL-interacting protein kinase 25 (CIPK25)
identical to CBL-interacting protein kinase 25
[Arabidopsis thaliana] gi|17646697|gb|AAL41008
Length = 488
Score = 28.7 bits (61), Expect = 3.8
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +1
Query: 295 DIKIANFSITFYGSELLQDTLLELNCG 375
D+K+++F ++ ++LQD LL CG
Sbjct: 178 DLKVSDFGLSALPEQILQDGLLHTQCG 204
>At4g25450.1 68417.m03665 ABC transporter family protein similar to
multidrug resistance protein 2 SP:P21440 from [Mus
musculus]
Length = 714
Score = 28.7 bits (61), Expect = 3.8
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +1
Query: 337 ELLQDTLLELNCGRRYGLVGLNGCGKSSLLAALGRREVPIPEHIDI 474
++L L LN G LVG +G GKS+++ L R P I +
Sbjct: 486 KVLDGLSLTLNSGTVTALVGSSGAGKSTIVQLLARFYEPTQGRITV 531
>At4g29900.1 68417.m04254 calcium-transporting ATPase, plasma
membrane-type, putative / Ca2+-ATPase, putative (ACA10)
identical to SP|Q9SZR1 Potential calcium-transporting
ATPase 10, plasma membrane-type (EC 3.6.3.8)
(Ca(2+)-ATPase isoform 10) {Arabidopsis thaliana};
similar to SP|Q9LF79 Calcium-transporting ATPase 8,
plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform
8) {Arabidopsis thaliana}
Length = 1069
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = -1
Query: 500 AGISRVRWNMSM-CSGIGTSRRPKAASNDDFPHPLSPTSPYLR 375
A +++ W M + C GIG+ P A P P +P S Y R
Sbjct: 1017 ASTTKLDWEMWLVCIGIGSISWPLAVIGKLIPVPETPVSQYFR 1059
>At3g28415.1 68416.m03551 P-glycoprotein, putative contains
ATP-binding cassette; related to multi drug resistance
proteins
Length = 1221
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +1
Query: 340 LLQDTLLELNCGRRYGLVGLNGCGKSSLLAALGRREVPI 456
+ D L + G+ LVG +G GKS++++ L R PI
Sbjct: 355 IFDDLCLRIPSGKSVALVGGSGSGKSTVISLLQRFYDPI 393
>At3g28390.1 68416.m03547 P-glycoprotein, putative similar to
P-glycoprotein homologue GI:2292907 from [Hordeum
vulgare subsp. vulgare]
Length = 1225
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +1
Query: 340 LLQDTLLELNCGRRYGLVGLNGCGKSSLLAALGRREVPIPEHI 468
+ D L + G+ LVG +G GKS++++ L R PI I
Sbjct: 364 IFDDLCLRVPSGKTVALVGGSGSGKSTVISLLQRFYDPIAGEI 406
>At1g53390.1 68414.m06052 ABC transporter family protein similar to
ATP-binding cassette, sub-family G, member 2
(Placenta-specific ATP- binding cassette transporter)
(Breast cancer resistance protein) SP:Q9UNQ0 from [Homo
sapiens]
Length = 1092
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/57 (28%), Positives = 28/57 (49%)
Frame = +1
Query: 280 HPRSRDIKIANFSITFYGSELLQDTLLELNCGRRYGLVGLNGCGKSSLLAALGRREV 450
H K ++ G ++L+ + GR ++G +G GK+SLL+AL + V
Sbjct: 486 HLMELSFKDLTLTLKSNGKQVLRCVTGSMKPGRITAVMGPSGAGKTSLLSALAGKAV 542
>At5g60760.1 68418.m07623 2-phosphoglycerate kinase-related contains
weak similarity to 2-phosphoglycerate kinase (GI:467751)
[Methanothermus fervidus]
Length = 738
Score = 27.9 bits (59), Expect = 6.6
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +1
Query: 388 LVGLNGCGKSSLLAALGRR 444
L G +GCGKS+L A LG R
Sbjct: 177 LCGTSGCGKSTLSALLGSR 195
>At3g62700.1 68416.m07043 glutathione-conjugate transporter,
putative similar to glutathione-conjugate transporter
AtMRP4 GI:2959767 from [Arabidopsis thaliana]
Length = 1539
Score = 27.9 bits (59), Expect = 6.6
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +1
Query: 259 CTGSLAVHPRSRDIKIANFSITFYGSE-LLQDTLLELNCGRRYGLVGLNGCGKSSLLAAL 435
C G++AV +IK +FS E +++ E+ G +VG G GKSSLLA++
Sbjct: 633 CDGNVAV-----EIKDGSFSWDDEDDEPAIENINFEVKKGELAAIVGTVGSGKSSLLASV 687
>At3g45090.2 68416.m04862 2-phosphoglycerate kinase-related contains
weak similarity to 2-phosphoglycerate kinase (GI:467751)
[Methanothermus fervidus]
Length = 698
Score = 27.9 bits (59), Expect = 6.6
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +1
Query: 388 LVGLNGCGKSSLLAALGRR 444
L G +GCGKS+L A LG R
Sbjct: 144 LCGTSGCGKSTLSALLGSR 162
>At3g45090.1 68416.m04863 2-phosphoglycerate kinase-related contains
weak similarity to 2-phosphoglycerate kinase (GI:467751)
[Methanothermus fervidus]
Length = 717
Score = 27.9 bits (59), Expect = 6.6
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +1
Query: 388 LVGLNGCGKSSLLAALGRR 444
L G +GCGKS+L A LG R
Sbjct: 163 LCGTSGCGKSTLSALLGSR 181
>At5g13610.1 68418.m01576 expressed protein
Length = 402
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -1
Query: 155 YHFRLRSSHEPPASCFCR*LAPSSS 81
+HF LRSS P CF +A S+S
Sbjct: 38 FHFSLRSSSNIPTRCFSNVVAKSNS 62
>At4g18050.1 68417.m02686 ABC transporter family protein contains Pfam
profile: PF00005 ABC transporter; similar to
multidrug-resistant protein CjMDR1 GI:14715462 from
[Coptis japonica]
Length = 1281
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/35 (31%), Positives = 22/35 (62%)
Frame = +1
Query: 337 ELLQDTLLELNCGRRYGLVGLNGCGKSSLLAALGR 441
++ +D L + G+ LVG +G GKS++++ + R
Sbjct: 1009 QIFRDLCLTIPSGKTVALVGESGSGKSTVISMIER 1043
>At3g28360.1 68416.m03544 ABC transporter family protein similar to
P-glycoprotein homologue GI:2292907 from [Hordeum
vulgare subsp. vulgare]
Length = 1158
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +1
Query: 340 LLQDTLLELNCGRRYGLVGLNGCGKSSLLAALGR 441
+ D L++ G+ LVG +G GKS++++ L R
Sbjct: 293 IFDDLCLKIPSGKTVALVGGSGSGKSTVISLLQR 326
>At3g28345.1 68416.m03541 ABC transporter family protein similar to
P-glycoprotein [Arabidopsis thaliana] GI:3849833;
contains Pfam profiles PF00005: ABC transporter,
PF00664: ABC transporter transmembrane region
Length = 1240
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +1
Query: 334 SELLQDTLLELNCGRRYGLVGLNGCGKSSLLAALGRREVPIPEHI 468
+ + D L + G+ LVG +G GKS++++ L R P+ I
Sbjct: 374 TSIFDDFCLRVPSGKTVALVGGSGSGKSTVISLLQRFYDPLAGEI 418
>At2g34660.1 68415.m04258 glutathione S-conjugate ABC transporter
(MRP2) almost identical to MgATP-energized glutathione
S-conjugate pump GI:2909781 from [Arabidopsis thaliana]
Length = 1623
Score = 27.5 bits (58), Expect = 8.8
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +1
Query: 379 RYGLVGLNGCGKSSLLAALGR 441
+ G+VG G GKSSLL AL R
Sbjct: 1271 KVGIVGRTGAGKSSLLNALFR 1291
>At1g30400.1 68414.m03716 glutathione S-conjugate ABC transporter
(MRP1) identical to glutathione S-conjugate transporting
ATPase (AtMRP1) [Arabidopsis thaliana] GI:2340166
Length = 1622
Score = 27.5 bits (58), Expect = 8.8
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +1
Query: 379 RYGLVGLNGCGKSSLLAALGR 441
+ G+VG G GKSSLL AL R
Sbjct: 1266 KVGIVGRTGAGKSSLLNALFR 1286
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,034,730
Number of Sequences: 28952
Number of extensions: 252347
Number of successful extensions: 829
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 776
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 828
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1447936096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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